RNA–Protein interactions for RNA: ENST00000552491.5

LIMA1-212, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 2,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-212ENST00000552491 OR5M11Q96RB7 305 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 YME1L1Q96TA2 773 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 SLC6A16Q9GZN6 736 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 CHST8Q9H2A9 424 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 SLC32A1Q9H598 525 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 ELOVL6Q9H5J4 265 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 RMI1Q9H9A7 625 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 ZFYVE1Q9HBF4 777 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 RDH14Q9HBH5 336 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 NEK6Q9HC98 313 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 PLCXD1Q9NUJ7 323 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 C14orf119Q9NWQ9 140 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 MARCH5Q9NX47 278 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 ARL15Q9NXU5 204 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 RPS6KA6Q9UK32 745 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 SLC22A14Q9Y267 594 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 PCDHGB6Q9Y5F9 930 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 MN1Q10571 1320 aaPredicted RBP5.23□□□□□ -1.57
LIMA1-212ENST00000552491 ANAPC1Q9H1A4 1944 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 PRRC2BQ5JSZ5 2229 aaKnown RBP5.23□□□□□ -1.57
LIMA1-212ENST00000552491 ZNF840PA6NDX5 716 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 CLCA1A8K7I4 914 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 H3BQ06 376 aaPredicted RBP5.23□□□□□ -1.57
LIMA1-212ENST00000552491 TERTO14746 1132 aaKnown RBP5.23□□□□□ -1.57
LIMA1-212ENST00000552491 SYN3O14994 580 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 CA12O43570 354 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 ASNA1O43681 348 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 PCDH7O60245 1069 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 DPM1O60762 260 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 EPN2O95208 641 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 ANXA5P08758 320 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 RPL17P18621 184 aaKnown RBP5.23□□□□□ -1.57
LIMA1-212ENST00000552491 ITPKAP23677 461 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 PRPH2P23942 346 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 OR1E2P47887 323 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 SLC6A12P48065 614 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 IDH2P48735 452 aaKnown RBP5.23□□□□□ -1.57
LIMA1-212ENST00000552491 TRPC1P48995 793 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 COPZ1P61923 177 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 PRKCDQ05655 676 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 ELP6Q0PNE2 266 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 ABRQ12979 859 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 GAB1Q13480 694 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 KRR1Q13601 381 aaKnown RBP5.23□□□□□ -1.57
LIMA1-212ENST00000552491 BOP1Q14137 746 aaKnown RBP5.23□□□□□ -1.57
LIMA1-212ENST00000552491 CYP27C1Q4G0S4 372 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 ARMCX4Q5H9R4 360 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 MLIPQ5VWP3 458 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 PRSS55Q6UWB4 352 aaPredicted RBP5.23□□□□□ -1.57
LIMA1-212ENST00000552491 MMAAQ8IVH4 418 aaKnown RBP5.23□□□□□ -1.57
LIMA1-212ENST00000552491 TCAIMQ8N3R3 496 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 CPA6Q8N4T0 437 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 GPR26Q8NDV2 337 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 OR52J3Q8NH60 311 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 CDC26Q8NHZ8 85 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 SH3KBP1Q96B97 665 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 CMTM7Q96FZ5 175 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 NEDD4LQ96PU5 975 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 EPYCQ99645 322 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 TTLL2Q9BWV7 592 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 ATG10Q9H0Y0 220 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 RUBCNLQ9H714 662 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 TPT1P8Q9HAU6 139 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 GPATCH2Q9NW75 528 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 ERVK13-1Q9NX77 482 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 NDUFAF4Q9P032 175 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 SPASTQ9UBP0 616 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 CRLS1Q9UJA2 301 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 TBC1D24Q9ULP9 559 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 PCDHGA2Q9Y5H1 932 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 OR51B4Q9Y5P0 310 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 LYVE1Q9Y5Y7 322 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 CFAP20Q9Y6A4 193 aaKnown RBP5.23□□□□□ -1.57
LIMA1-212ENST00000552491 PDE4DIPQ5VU43 2346 aa5.23□□□□□ -1.57
LIMA1-212ENST00000552491 TET1Q8NFU7 2136 aa5.22□□□□□ -1.57
LIMA1-212ENST00000552491 GLYATL1P3A0A0U1RQE8 302 aa5.22□□□□□ -1.57
LIMA1-212ENST00000552491 C2orf78A6NCI8 922 aa5.22□□□□□ -1.57
LIMA1-212ENST00000552491 OR6C75A6NL08 312 aa5.22□□□□□ -1.57
LIMA1-212ENST00000552491 A8MV72 311 aaPredicted RBP5.22□□□□□ -1.57
LIMA1-212ENST00000552491 MAGEB17A8MXT2 336 aa5.22□□□□□ -1.57
LIMA1-212ENST00000552491 J3KTA2 159 aa5.22□□□□□ -1.57
LIMA1-212ENST00000552491 AOC2O75106 756 aa5.22□□□□□ -1.57
LIMA1-212ENST00000552491 ADAMTS4O75173 837 aa5.22□□□□□ -1.57
LIMA1-212ENST00000552491 ETHE1O95571 254 aa5.22□□□□□ -1.57
LIMA1-212ENST00000552491 TRBC1P01850 177 aa5.22□□□□□ -1.57
LIMA1-212ENST00000552491 RPLP0P05388 317 aaKnown RBP5.22□□□□□ -1.57
LIMA1-212ENST00000552491 HSMCR30P0CW71 290 aa5.22□□□□□ -1.57
LIMA1-212ENST00000552491 CYBAP13498 195 aa5.22□□□□□ -1.57
LIMA1-212ENST00000552491 ITGALP20701 1170 aa5.22□□□□□ -1.57
LIMA1-212ENST00000552491 MAPK1P28482 360 aa5.22□□□□□ -1.57
LIMA1-212ENST00000552491 S100A5P33763 92 aa5.22□□□□□ -1.57
LIMA1-212ENST00000552491 CSKP41240 450 aa5.22□□□□□ -1.57
LIMA1-212ENST00000552491 RGS6P49758 472 aa5.22□□□□□ -1.57
LIMA1-212ENST00000552491 DGKEP52429 567 aa5.22□□□□□ -1.57
LIMA1-212ENST00000552491 UGT2B15P54855 530 aa5.22□□□□□ -1.57
LIMA1-212ENST00000552491 ST3GAL4Q11206 333 aa5.22□□□□□ -1.57
LIMA1-212ENST00000552491 FOXD4Q12950 439 aaPredicted RBP5.22□□□□□ -1.57
LIMA1-212ENST00000552491 KCNA10Q16322 511 aa5.22□□□□□ -1.57
LIMA1-212ENST00000552491 GGTA1PQ4G0N0 100 aa5.22□□□□□ -1.57
LIMA1-212ENST00000552491 ADGRF1Q5T601 910 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms