RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 CLDN2P57739 230 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 RPS13P62277 151 aaKnown RBP2.32□□□□□ -2.04
CPSF6-207ENST00000551516 TNNC1P63316 161 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 OLR1P78380 273 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 PRAMEP78395 509 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 ARF5P84085 180 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 ECT2LQ008S8 904 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 CCDC173Q0VFZ6 552 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 TMEM115Q12893 351 aaPredicted RBP2.32□□□□□ -2.04
CPSF6-207ENST00000551516 FOXF2Q12947 444 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 KLF10Q13118 480 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 RUNX2Q13950 521 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 CRYMQ14894 314 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 TOMM20Q15388 145 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 HIST2H2ACQ16777 129 aaPredicted RBP2.32□□□□□ -2.04
CPSF6-207ENST00000551516 DPCR1Q3MIW9 517 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 TTI2Q6NXR4 508 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 NEK5Q6P3R8 708 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 FBXO42Q6P3S6 717 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 CYP20A1Q6UW02 462 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 SCARA5Q6ZMJ2 495 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 ZNF788Q6ZQV5 615 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 CYP4V2Q6ZWL3 525 aaPredicted RBP2.32□□□□□ -2.04
CPSF6-207ENST00000551516 MOB3CQ70IA8 216 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 HORMAD1Q86X24 394 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 NRROSQ86YC3 692 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 CCDC65Q8IXS2 484 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 CCAR2Q8N163 923 aaKnown RBP2.32□□□□□ -2.04
CPSF6-207ENST00000551516 GUF1Q8N442 669 aaKnown RBP2.32□□□□□ -2.04
CPSF6-207ENST00000551516 TTC39CQ8N584 583 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 ARFGAP1Q8N6T3 406 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 ZNF548Q8NEK5 533 aaPredicted RBP2.32□□□□□ -2.04
CPSF6-207ENST00000551516 ZNF397Q8NF99 534 aaPredicted RBP2.32□□□□□ -2.04
CPSF6-207ENST00000551516 TMEM170AQ8WVE7 144 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 KAT2AQ92830 837 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 MIB2Q96AX9 1013 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 INTS12Q96CB8 462 aaKnown RBP2.32□□□□□ -2.04
CPSF6-207ENST00000551516 PGAP3Q96FM1 320 aaPredicted RBP2.32□□□□□ -2.04
CPSF6-207ENST00000551516 RSRC1Q96IZ7 334 aaKnown RBP2.32□□□□□ -2.04
CPSF6-207ENST00000551516 SERAC1Q96JX3 654 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 CPXM1Q96SM3 734 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 NPY6RQ99463 290 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 PIP5K1AQ99755 562 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 NCAPGQ9BPX3 1015 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 PIMREGQ9BSJ6 248 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 TUBB6Q9BUF5 446 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 HEMGNQ9BXL5 484 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 ITPAQ9BY32 194 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 SCAND2PQ9GZW5 306 aaPredicted RBP2.32□□□□□ -2.04
CPSF6-207ENST00000551516 MUC13Q9H3R2 512 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 CXorf56Q9H5V9 222 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 BRF2Q9HAW0 419 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 SIX2Q9NPC8 291 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 MBNL1Q9NR56 388 aaKnown RBP2.32□□□□□ -2.04
CPSF6-207ENST00000551516 C20orf141Q9NUB4 165 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 RAB20Q9NX57 234 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 ARHGEF38Q9NXL2 777 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 SUN2Q9UH99 717 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 APPL1Q9UKG1 709 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 UTS2RQ9UKP6 389 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 TSPAN16Q9UKR8 245 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 CORO1CQ9ULV4 474 aaPredicted RBP2.32□□□□□ -2.04
CPSF6-207ENST00000551516 A4GNTQ9UNA3 340 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 SATB2Q9UPW6 733 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 FAM96BQ9Y3D0 163 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 TTLL3Q9Y4R7 772 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 KCNE2Q9Y6J6 123 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 DOCK9Q9BZ29 2069 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 KIF26BQ2KJY2 2108 aa2.32□□□□□ -2.04
CPSF6-207ENST00000551516 PCSK5Q92824 1860 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 SHROOM3Q8TF72 1996 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 MAP1AP78559 2803 aaPredicted RBP2.31□□□□□ -2.04
CPSF6-207ENST00000551516 FBN1P35555 2871 aaKnown RBP2.31□□□□□ -2.04
CPSF6-207ENST00000551516 A0A0A0MQY5 61 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 KIR2DS5A0A0G2JLQ3 304 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 EDDM13A0A1B0GTR0 161 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 FAM237BA0A1B0GVD1 139 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.31□□□□□ -2.04
CPSF6-207ENST00000551516 TSPAN11A1L157 253 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 LRRC3CA6NJW4 275 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 MYO1GB0I1T2 1018 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 KIR2DS3K7RE56 304 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 PPP6CO00743 305 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 POLR2DO15514 142 aaKnown RBP2.31□□□□□ -2.04
CPSF6-207ENST00000551516 STX6O43752 255 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 SLC25A17O43808 307 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 SYNCRIPO60506 623 aaKnown RBP2.31□□□□□ -2.04
CPSF6-207ENST00000551516 MTA2O94776 668 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 NUDT3O95989 172 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 PAK4O96013 591 aaPredicted RBP2.31□□□□□ -2.04
CPSF6-207ENST00000551516 ATP5BP06576 529 aaKnown RBP2.31□□□□□ -2.04
CPSF6-207ENST00000551516 HMBSP08397 361 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 THEGLP0DJG4 465 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 VDRP11473 427 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 FGF3P11487 239 aaPredicted RBP2.31□□□□□ -2.04
CPSF6-207ENST00000551516 GP1BBP13224 206 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 CCL4P13236 92 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 PRLRP16471 622 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 BMP5P22003 454 aa2.31□□□□□ -2.04
CPSF6-207ENST00000551516 RDXP35241 583 aaKnown RBP2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms