RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 MRPS30Q9NP92 439 aaKnown RBP6.47□□□□□ -1.37
PRPF40B-214ENST00000551320 FBXO6Q9NRD1 293 aaPredicted RBP6.47□□□□□ -1.37
PRPF40B-214ENST00000551320 SEMA3GQ9NS98 782 aa6.47□□□□□ -1.37
PRPF40B-214ENST00000551320 STMN3Q9NZ72 180 aa6.47□□□□□ -1.37
PRPF40B-214ENST00000551320 SLC17A6Q9P2U8 582 aa6.47□□□□□ -1.37
PRPF40B-214ENST00000551320 SEC14L3Q9UDX4 400 aa6.47□□□□□ -1.37
PRPF40B-214ENST00000551320 FEZ2Q9UHY8 353 aaPredicted RBP6.47□□□□□ -1.37
PRPF40B-214ENST00000551320 NPIPA1Q9UND3 350 aa6.47□□□□□ -1.37
PRPF40B-214ENST00000551320 EFR3BQ9Y2G0 817 aa6.47□□□□□ -1.37
PRPF40B-214ENST00000551320 ACANP16112 2415 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 DYTNA2CJ06 578 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 OR2A25A4D2G3 310 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 GOLGA6L9A6NEM1 432 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 A8MUA0 341 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 LCMT2O60294 686 aaKnown RBP6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 RDH16O75452 317 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 BANF1O75531 89 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 SUN1O94901 812 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 RASAL1O95294 804 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 SLC16A8O95907 504 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 IGHEP01854 428 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 SERPINA7P05543 415 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 PIM1P11309 404 aaPredicted RBP6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 ESRRAP11474 423 aaPredicted RBP6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 CHRM3P20309 590 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 CMPK1P30085 196 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 CXCR5P32302 372 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 RPA3P35244 121 aaPredicted RBP6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 SLC26A3P40879 764 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 PER3P56645 1201 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 BASP1P80723 227 aaKnown RBP6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 ACVR1Q04771 509 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 CTBP1Q13363 440 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 SNTB1Q13884 538 aaKnown RBP6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 TMED2Q15363 201 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 SIX1Q15475 284 aaPredicted RBP6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 TYSND1Q2T9J0 566 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 MUM1Q2TAK8 710 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 BTBD16Q32M84 506 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 FAM214AQ32MH5 1076 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 P3H1Q32P28 736 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 RPS26P11Q5JNZ5 115 aaPredicted RBP6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 TCTE1Q5JU00 501 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 ZNF549Q6P9A3 640 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 UNC5DQ6UXZ4 953 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 C16orf47Q6ZP98 133 aaPredicted RBP6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 CENPUQ71F23 418 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 PIWIL4Q7Z3Z4 852 aaKnown RBP6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 VN1R4Q7Z5H5 301 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 FGD2Q7Z6J4 655 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 LINC00523Q86TU6 105 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 GAS2L3Q86XJ1 694 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 PDSS2Q86YH6 399 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 CRLF3Q8IUI8 442 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 REXO1L1PQ8IX06 675 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 CCDC170Q8IYT3 715 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 AGGF1Q8N302 714 aaeCLIP6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 ARHGEF39Q8N4T4 335 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 UBL4BQ8N7F7 174 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 KCT2Q8NC54 265 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 OR9A1PQ8NGU1 263 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 GSDMBQ8TAX9 411 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 ZNF480Q8WV37 535 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 LPGAT1Q92604 370 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 ZUFSPQ96AP4 578 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 RAD51AP1Q96B01 352 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 HES6Q96HZ4 224 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 IMMP1LQ96LU5 166 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 OR2A5Q96R48 311 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 LMF1Q96S06 567 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 ZFYVE21Q9BQ24 234 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 PLCD4Q9BRC7 762 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 TRIM8Q9BZR9 551 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 LIN28AQ9H9Z2 209 aaKnown RBP6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 MRM3Q9HC36 420 aaKnown RBP6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 TREX1Q9NSU2 369 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 INTS7Q9NVH2 962 aaKnown RBP6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 ANAPC5Q9UJX4 755 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 ADAMTS6Q9UKP5 1117 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 FAM169AQ9Y6X4 670 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 CACNA1CQ13936 2221 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 MED13LQ71F56 2210 aa6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 HRNRQ86YZ3 2850 aaPredicted RBP6.46□□□□□ -1.38
PRPF40B-214ENST00000551320 TRAV17A0A0B4J275 112 aa6.45□□□□□ -1.38
PRPF40B-214ENST00000551320 A0A1B0GUH1 482 aa6.45□□□□□ -1.38
PRPF40B-214ENST00000551320 TARM1B6A8C7 271 aa6.45□□□□□ -1.38
PRPF40B-214ENST00000551320 GNB5O14775 395 aa6.45□□□□□ -1.38
PRPF40B-214ENST00000551320 SLC16A5O15375 505 aa6.45□□□□□ -1.38
PRPF40B-214ENST00000551320 PSMD3O43242 534 aa6.45□□□□□ -1.38
PRPF40B-214ENST00000551320 SRPX2O60687 465 aaPredicted RBP6.45□□□□□ -1.38
PRPF40B-214ENST00000551320 SLC19A2O60779 497 aa6.45□□□□□ -1.38
PRPF40B-214ENST00000551320 PRAMEF2O60811 474 aa6.45□□□□□ -1.38
PRPF40B-214ENST00000551320 PDE9AO76083 593 aa6.45□□□□□ -1.38
PRPF40B-214ENST00000551320 USP1O94782 785 aa6.45□□□□□ -1.38
PRPF40B-214ENST00000551320 BMP10O95393 424 aa6.45□□□□□ -1.38
PRPF40B-214ENST00000551320 MATN4O95460 622 aa6.45□□□□□ -1.38
PRPF40B-214ENST00000551320 GSTM1P09488 218 aa6.45□□□□□ -1.38
PRPF40B-214ENST00000551320 COX6B1P14854 86 aa6.45□□□□□ -1.38
PRPF40B-214ENST00000551320 CXCR2P25025 360 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms