RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 HNRNPCL4P0DMR1 293 aa5□□□□□ -1.61
CPSF6-206ENST00000550987 EEF2P13639 858 aaKnown RBP5□□□□□ -1.61
CPSF6-206ENST00000550987 CKMT2P17540 419 aa5□□□□□ -1.61
CPSF6-206ENST00000550987 LBPP18428 481 aa5□□□□□ -1.61
CPSF6-206ENST00000550987 AOC1P19801 751 aa5□□□□□ -1.61
CPSF6-206ENST00000550987 TNFRSF8P28908 595 aa5□□□□□ -1.61
CPSF6-206ENST00000550987 IL15P40933 162 aaPredicted RBP5□□□□□ -1.61
CPSF6-206ENST00000550987 RGS7P49802 495 aa5□□□□□ -1.61
CPSF6-206ENST00000550987 PGGT1BP53609 377 aa5□□□□□ -1.61
CPSF6-206ENST00000550987 MTCP1P56278 107 aa5□□□□□ -1.61
CPSF6-206ENST00000550987 ARF5P84085 180 aa5□□□□□ -1.61
CPSF6-206ENST00000550987 SLC20A2Q08357 652 aa5□□□□□ -1.61
CPSF6-206ENST00000550987 FAM174BQ3ZCQ3 159 aa5□□□□□ -1.61
CPSF6-206ENST00000550987 SYT14P1Q58G82 188 aa5□□□□□ -1.61
CPSF6-206ENST00000550987 C8orf82Q6P1X6 216 aaPredicted RBP5□□□□□ -1.61
CPSF6-206ENST00000550987 ZNF530Q6P9A1 599 aaPredicted RBP5□□□□□ -1.61
CPSF6-206ENST00000550987 SYCE2Q6PIF2 218 aa5□□□□□ -1.61
CPSF6-206ENST00000550987 TECPR1Q7Z6L1 1165 aa5□□□□□ -1.61
CPSF6-206ENST00000550987 ODF3L1Q8IXM7 274 aa5□□□□□ -1.61
CPSF6-206ENST00000550987 SRRM1Q8IYB3 904 aaKnown RBP5□□□□□ -1.61
CPSF6-206ENST00000550987 DBF4BQ8NFT6 615 aa5□□□□□ -1.61
CPSF6-206ENST00000550987 SPATA20Q8TB22 786 aa5□□□□□ -1.61
CPSF6-206ENST00000550987 RNF128Q8TEB7 428 aa5□□□□□ -1.61
CPSF6-206ENST00000550987 TMED6Q8WW62 240 aa5□□□□□ -1.61
CPSF6-206ENST00000550987 RIT1Q92963 219 aa5□□□□□ -1.61
CPSF6-206ENST00000550987 SPATA33Q96N06 139 aa5□□□□□ -1.61
CPSF6-206ENST00000550987 KRTAP4-12Q9BQ66 201 aa5□□□□□ -1.61
CPSF6-206ENST00000550987 KRTAP4-8Q9BYQ9 185 aa5□□□□□ -1.61
CPSF6-206ENST00000550987 UBTD1Q9HAC8 227 aa5□□□□□ -1.61
CPSF6-206ENST00000550987 ACKR4Q9NPB9 350 aa5□□□□□ -1.61
CPSF6-206ENST00000550987 DNAJC17Q9NVM6 304 aaKnown RBP5□□□□□ -1.61
CPSF6-206ENST00000550987 OCIAD1Q9NX40 245 aa5□□□□□ -1.61
CPSF6-206ENST00000550987 ZNF224Q9NZL3 707 aa5□□□□□ -1.61
CPSF6-206ENST00000550987 POU2F3Q9UKI9 436 aa5□□□□□ -1.61
CPSF6-206ENST00000550987 OR2W1Q9Y3N9 320 aa5□□□□□ -1.61
CPSF6-206ENST00000550987 PCDHAC2Q9Y5I4 1007 aa5□□□□□ -1.61
CPSF6-206ENST00000550987 SIP14410 1827 aa5□□□□□ -1.61
CPSF6-206ENST00000550987 ECM29Q5VYK3 1845 aa5□□□□□ -1.61
CPSF6-206ENST00000550987 HIVEP3Q5T1R4 2406 aa4.99□□□□□ -1.61
CPSF6-206ENST00000550987 IGLV5-37A0A075B6J1 123 aa4.99□□□□□ -1.61
CPSF6-206ENST00000550987 KRTAP9-6A0A140TA67 174 aa4.99□□□□□ -1.61
CPSF6-206ENST00000550987 ZCWPW2A0A1B0GU75 182 aa4.99□□□□□ -1.61
CPSF6-206ENST00000550987 SYCE3A1L190 88 aa4.99□□□□□ -1.61
CPSF6-206ENST00000550987 SDR42E2A6NKP2 422 aa4.99□□□□□ -1.61
CPSF6-206ENST00000550987 KRTAP9-7A8MTY7 169 aa4.99□□□□□ -1.61
CPSF6-206ENST00000550987 RTCAO00442 366 aaKnown RBP4.99□□□□□ -1.61
CPSF6-206ENST00000550987 OR10H2O60403 315 aa4.99□□□□□ -1.61
CPSF6-206ENST00000550987 SELENOFO60613 162 aa4.99□□□□□ -1.61
CPSF6-206ENST00000550987 GCNT3O95395 438 aa4.99□□□□□ -1.61
CPSF6-206ENST00000550987 GH1P01241 217 aa4.99□□□□□ -1.61
CPSF6-206ENST00000550987 CSN3P07498 182 aa4.99□□□□□ -1.61
CPSF6-206ENST00000550987 FAM200BP0CF97 657 aa4.99□□□□□ -1.61
CPSF6-206ENST00000550987 SP9P0CG40 484 aa4.99□□□□□ -1.61
CPSF6-206ENST00000550987 UROSP10746 265 aa4.99□□□□□ -1.61
CPSF6-206ENST00000550987 SCP2P22307 547 aa4.99□□□□□ -1.61
CPSF6-206ENST00000550987 TKTP29401 623 aaKnown RBP4.99□□□□□ -1.61
CPSF6-206ENST00000550987 RBMXP38159 391 aaKnown RBP4.99□□□□□ -1.61
CPSF6-206ENST00000550987 USP8P40818 1118 aa4.99□□□□□ -1.61
CPSF6-206ENST00000550987 MMP15P51511 669 aa4.99□□□□□ -1.61
CPSF6-206ENST00000550987 HMGA2P52926 109 aa4.99□□□□□ -1.61
CPSF6-206ENST00000550987 SEC61A1P61619 476 aaKnown RBP4.99□□□□□ -1.61
CPSF6-206ENST00000550987 EEF1A2Q05639 463 aaKnown RBP4.99□□□□□ -1.61
CPSF6-206ENST00000550987 NPRL3Q12980 569 aa4.99□□□□□ -1.61
CPSF6-206ENST00000550987 SLC39A6Q13433 755 aa4.99□□□□□ -1.61
CPSF6-206ENST00000550987 DUOXA1Q1HG43 343 aa4.99□□□□□ -1.61
CPSF6-206ENST00000550987 FUT11Q495W5 492 aa4.99□□□□□ -1.61
CPSF6-206ENST00000550987 RAB6CQ53S08 254 aa4.99□□□□□ -1.61
CPSF6-206ENST00000550987 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.99□□□□□ -1.61
CPSF6-206ENST00000550987 GRTP1Q5TC63 336 aa4.99□□□□□ -1.61
CPSF6-206ENST00000550987 SLC27A1Q6PCB7 646 aa4.99□□□□□ -1.61
CPSF6-206ENST00000550987 CNSTQ6PJW8 725 aa4.99□□□□□ -1.61
CPSF6-206ENST00000550987 PACS1Q6VY07 963 aa4.99□□□□□ -1.61
CPSF6-206ENST00000550987 PEX5LQ8IYB4 626 aa4.99□□□□□ -1.61
CPSF6-206ENST00000550987 C1orf87Q8N0U7 546 aa4.99□□□□□ -1.61
CPSF6-206ENST00000550987 THAP8Q8NA92 274 aa4.99□□□□□ -1.61
CPSF6-206ENST00000550987 B4GALNT2Q8NHY0 566 aa4.99□□□□□ -1.61
CPSF6-206ENST00000550987 VANGL1Q8TAA9 524 aaPredicted RBP4.99□□□□□ -1.61
CPSF6-206ENST00000550987 ST7LQ8TDW4 575 aa4.99□□□□□ -1.61
CPSF6-206ENST00000550987 PROX1Q92786 737 aa4.99□□□□□ -1.61
CPSF6-206ENST00000550987 HMCESQ96FZ2 354 aa4.99□□□□□ -1.61
CPSF6-206ENST00000550987 KLHL5Q96PQ7 755 aa4.99□□□□□ -1.61
CPSF6-206ENST00000550987 RAD9AQ99638 391 aa4.99□□□□□ -1.61
CPSF6-206ENST00000550987 CACNG6Q9BXT2 260 aa4.99□□□□□ -1.61
CPSF6-206ENST00000550987 LSG1Q9H089 658 aaKnown RBP4.99□□□□□ -1.61
CPSF6-206ENST00000550987 RAB6CQ9H0N0 254 aa4.99□□□□□ -1.61
CPSF6-206ENST00000550987 IARS2Q9NSE4 1012 aaKnown RBP4.99□□□□□ -1.61
CPSF6-206ENST00000550987 TMEM30AQ9NV96 361 aa4.99□□□□□ -1.61
CPSF6-206ENST00000550987 POLKQ9UBT6 870 aa4.99□□□□□ -1.61
CPSF6-206ENST00000550987 JRKLQ9Y4A0 524 aa4.99□□□□□ -1.61
CPSF6-206ENST00000550987 COL11A1P12107 1806 aaPredicted RBP4.99□□□□□ -1.61
CPSF6-206ENST00000550987 CRYBG3Q68DQ2 2970 aa4.98□□□□□ -1.61
CPSF6-206ENST00000550987 COL6A6A6NMZ7 2263 aa4.98□□□□□ -1.61
CPSF6-206ENST00000550987 DUXAA6NLW8 204 aa4.98□□□□□ -1.61
CPSF6-206ENST00000550987 PRR32B1ATL7 298 aa4.98□□□□□ -1.61
CPSF6-206ENST00000550987 KBTBD13C9JR72 458 aa4.98□□□□□ -1.61
CPSF6-206ENST00000550987 AKAP8O43823 692 aaKnown RBP4.98□□□□□ -1.61
CPSF6-206ENST00000550987 ZBTB14O43829 449 aa4.98□□□□□ -1.61
CPSF6-206ENST00000550987 FCGR3BO75015 233 aa4.98□□□□□ -1.61
CPSF6-206ENST00000550987 INHBAP08476 426 aa4.98□□□□□ -1.61
CPSF6-206ENST00000550987 ACP2P11117 423 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms