RNA–Protein interactions for RNA: ENST00000550962.5

CEP290-205, Transcript of centrosomal protein 290, humanhuman

TSL 3

Gene CEP290, Length 697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-205ENST00000550962 FDCSPQ8NFU4 85 aa12.65□□□□□ -0.38
CEP290-205ENST00000550962 TM4SF19Q96DZ7 209 aa12.65□□□□□ -0.38
CEP290-205ENST00000550962 SEC16BQ96JE7 1060 aa12.65□□□□□ -0.38
CEP290-205ENST00000550962 UBXN10Q96LJ8 280 aa12.65□□□□□ -0.38
CEP290-205ENST00000550962 OR4K3Q96R72 315 aa12.65□□□□□ -0.38
CEP290-205ENST00000550962 ACSS3Q9H6R3 686 aa12.65□□□□□ -0.38
CEP290-205ENST00000550962 PRM3Q9NNZ6 103 aa12.65□□□□□ -0.38
CEP290-205ENST00000550962 DNAJC11Q9NVH1 559 aa12.65□□□□□ -0.38
CEP290-205ENST00000550962 NINJ2Q9NZG7 142 aa12.65□□□□□ -0.38
CEP290-205ENST00000550962 NUDT4Q9NZJ9 180 aa12.65□□□□□ -0.38
CEP290-205ENST00000550962 C19orf25Q9UFG5 118 aaPredicted RBP12.65□□□□□ -0.38
CEP290-205ENST00000550962 ZFP69BQ9UJL9 534 aa12.65□□□□□ -0.38
CEP290-205ENST00000550962 FBXL4Q9UKA2 621 aa12.65□□□□□ -0.38
CEP290-205ENST00000550962 SMG1Q96Q15 3661 aaKnown RBP12.65□□□□□ -0.39
CEP290-205ENST00000550962 A0A087WUV0 522 aaPredicted RBP12.64□□□□□ -0.39
CEP290-205ENST00000550962 A0A088AWK7 358 aa12.64□□□□□ -0.39
CEP290-205ENST00000550962 IDSB3KWA1 339 aa12.64□□□□□ -0.39
CEP290-205ENST00000550962 FOXS1O43638 330 aa12.64□□□□□ -0.39
CEP290-205ENST00000550962 STK16O75716 305 aa12.64□□□□□ -0.39
CEP290-205ENST00000550962 KRT38O76015 456 aa12.64□□□□□ -0.39
CEP290-205ENST00000550962 WISP3O95389 354 aaPredicted RBP12.64□□□□□ -0.39
CEP290-205ENST00000550962 ACSL3O95573 720 aa12.64□□□□□ -0.39
CEP290-205ENST00000550962 C1QAP02745 245 aa12.64□□□□□ -0.39
CEP290-205ENST00000550962 UQCRHP07919 91 aa12.64□□□□□ -0.39
CEP290-205ENST00000550962 TFEBP19484 476 aa12.64□□□□□ -0.39
CEP290-205ENST00000550962 ZNF10P21506 573 aaPredicted RBP12.64□□□□□ -0.39
CEP290-205ENST00000550962 CNTFP26441 200 aa12.64□□□□□ -0.39
CEP290-205ENST00000550962 VARSP26640 1264 aaKnown RBP12.64□□□□□ -0.39
CEP290-205ENST00000550962 TYK2P29597 1187 aa12.64□□□□□ -0.39
CEP290-205ENST00000550962 SLC6A12P48065 614 aa12.64□□□□□ -0.39
CEP290-205ENST00000550962 SOX8P57073 446 aa12.64□□□□□ -0.39
CEP290-205ENST00000550962 STXBP1P61764 594 aaKnown RBP12.64□□□□□ -0.39
CEP290-205ENST00000550962 LAPTM5Q13571 262 aa12.64□□□□□ -0.39
CEP290-205ENST00000550962 RBBP5Q15291 538 aaKnown RBP12.64□□□□□ -0.39
CEP290-205ENST00000550962 PAGE2BQ5JRK9 111 aa12.64□□□□□ -0.39
CEP290-205ENST00000550962 CATSPEREQ5SY80 951 aa12.64□□□□□ -0.39
CEP290-205ENST00000550962 LGSNQ5TDP6 509 aa12.64□□□□□ -0.39
CEP290-205ENST00000550962 MFSD4BQ5TF39 518 aa12.64□□□□□ -0.39
CEP290-205ENST00000550962 MROH9Q5TGP6 573 aa12.64□□□□□ -0.39
CEP290-205ENST00000550962 PRSS58Q8IYP2 241 aa12.64□□□□□ -0.39
CEP290-205ENST00000550962 SNX31Q8N9S9 440 aa12.64□□□□□ -0.39
CEP290-205ENST00000550962 PDPRQ8NCN5 879 aa12.64□□□□□ -0.39
CEP290-205ENST00000550962 OR9A4Q8NGU2 314 aa12.64□□□□□ -0.39
CEP290-205ENST00000550962 ZCCHC10Q8TBK6 192 aa12.64□□□□□ -0.39
CEP290-205ENST00000550962 NT5CQ8TCD5 201 aa12.64□□□□□ -0.39
CEP290-205ENST00000550962 MRRFQ96E11 262 aaKnown RBP12.64□□□□□ -0.39
CEP290-205ENST00000550962 SMAD5Q99717 465 aaKnown RBP12.64□□□□□ -0.39
CEP290-205ENST00000550962 CDC42EP4Q9H3Q1 356 aaKnown RBP12.64□□□□□ -0.39
CEP290-205ENST00000550962 EHD1Q9H4M9 534 aa12.64□□□□□ -0.39
CEP290-205ENST00000550962 CLK4Q9HAZ1 481 aaKnown RBP12.64□□□□□ -0.39
CEP290-205ENST00000550962 MLXIPLQ9NP71 852 aa12.64□□□□□ -0.39
CEP290-205ENST00000550962 DMGDHQ9UI17 866 aaKnown RBP12.64□□□□□ -0.39
CEP290-205ENST00000550962 IKZF3Q9UKT9 509 aa12.64□□□□□ -0.39
CEP290-205ENST00000550962 SH2B3Q9UQQ2 575 aa12.64□□□□□ -0.39
CEP290-205ENST00000550962 HS3ST3B1Q9Y662 390 aa12.64□□□□□ -0.39
CEP290-205ENST00000550962 SEC16AO15027 2179 aa12.63□□□□□ -0.39
CEP290-205ENST00000550962 NSG1A0A0A6YYJ2 146 aa12.63□□□□□ -0.39
CEP290-205ENST00000550962 SUPT3HB4E1H0 165 aa12.63□□□□□ -0.39
CEP290-205ENST00000550962 SOCS6O14544 535 aa12.63□□□□□ -0.39
CEP290-205ENST00000550962 KERAO60938 352 aa12.63□□□□□ -0.39
CEP290-205ENST00000550962 SUPT3HO75486 399 aa12.63□□□□□ -0.39
CEP290-205ENST00000550962 FAM155BO75949 473 aa12.63□□□□□ -0.39
CEP290-205ENST00000550962 MED26O95402 600 aa12.63□□□□□ -0.39
CEP290-205ENST00000550962 HPP00738 406 aa12.63□□□□□ -0.39
CEP290-205ENST00000550962 SLC35E2BP0CK96 405 aa12.63□□□□□ -0.39
CEP290-205ENST00000550962 C1GALT1C1LP0DN25 315 aa12.63□□□□□ -0.39
CEP290-205ENST00000550962 ICAM2P13598 275 aa12.63□□□□□ -0.39
CEP290-205ENST00000550962 IL1RNP18510 177 aa12.63□□□□□ -0.39
CEP290-205ENST00000550962 JAK1P23458 1154 aa12.63□□□□□ -0.39
CEP290-205ENST00000550962 GGT5P36269 586 aa12.63□□□□□ -0.39
CEP290-205ENST00000550962 MSH2P43246 934 aa12.63□□□□□ -0.39
CEP290-205ENST00000550962 SCTRP47872 440 aa12.63□□□□□ -0.39
CEP290-205ENST00000550962 MEF2AQ02078 507 aaPredicted RBP12.63□□□□□ -0.39
CEP290-205ENST00000550962 EFTUD2Q15029 972 aaKnown RBP eCLIP12.63□□□□□ -0.39
CEP290-205ENST00000550962 PDK4Q16654 411 aa12.63□□□□□ -0.39
CEP290-205ENST00000550962 HIST2H2ACQ16777 129 aaPredicted RBP12.63□□□□□ -0.39
CEP290-205ENST00000550962 MINDY4Q4G0A6 757 aa12.63□□□□□ -0.39
CEP290-205ENST00000550962 VWA2Q5GFL6 755 aa12.63□□□□□ -0.39
CEP290-205ENST00000550962 ATG9BQ674R7 924 aa12.63□□□□□ -0.39
CEP290-205ENST00000550962 HIST2H2AA3Q6FI13 130 aa12.63□□□□□ -0.39
CEP290-205ENST00000550962 LRRC70Q7Z2Q7 622 aa12.63□□□□□ -0.39
CEP290-205ENST00000550962 CMC1Q7Z7K0 106 aa12.63□□□□□ -0.39
CEP290-205ENST00000550962 SPATA6LQ8N4H0 392 aa12.63□□□□□ -0.39
CEP290-205ENST00000550962 ARHGEF39Q8N4T4 335 aa12.63□□□□□ -0.39
CEP290-205ENST00000550962 AMER3Q8N944 861 aa12.63□□□□□ -0.39
CEP290-205ENST00000550962 OR11G2Q8NGC1 345 aa12.63□□□□□ -0.39
CEP290-205ENST00000550962 RHEBL1Q8TAI7 183 aa12.63□□□□□ -0.39
CEP290-205ENST00000550962 EXT2Q93063 718 aa12.63□□□□□ -0.39
CEP290-205ENST00000550962 UBE2E3Q969T4 207 aa12.63□□□□□ -0.39
CEP290-205ENST00000550962 EFCAB11Q9BUY7 163 aa12.63□□□□□ -0.39
CEP290-205ENST00000550962 NUDT9Q9BW91 350 aa12.63□□□□□ -0.39
CEP290-205ENST00000550962 FUT8Q9BYC5 575 aa12.63□□□□□ -0.39
CEP290-205ENST00000550962 UNKQ9C0B0 810 aaKnown RBP12.63□□□□□ -0.39
CEP290-205ENST00000550962 EPS8L2Q9H6S3 715 aa12.63□□□□□ -0.39
CEP290-205ENST00000550962 ALG9Q9H6U8 611 aa12.63□□□□□ -0.39
CEP290-205ENST00000550962 RIC8BQ9NVN3 520 aa12.63□□□□□ -0.39
CEP290-205ENST00000550962 MKL2Q9ULH7 1088 aa12.63□□□□□ -0.39
CEP290-205ENST00000550962 ATRXP46100 2492 aa12.63□□□□□ -0.39
CEP290-205ENST00000550962 HEATR5BQ9P2D3 2071 aa12.62□□□□□ -0.39
CEP290-205ENST00000550962 ANKDD1BA6NHY2 528 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms