RNA–Protein interactions for RNA: ENST00000550268.2

AC027288.3-202, humanhuman

TSL 2 BASIC

Gene AC027288.3, Length 1,820 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC027288.3-202ENST00000550268 C11orf65Q8NCR3 313 aa13.89□□□□□ -0.19
AC027288.3-202ENST00000550268 ELMO1Q92556 727 aa13.89□□□□□ -0.19
AC027288.3-202ENST00000550268 VWCEQ96DN2 955 aa13.89□□□□□ -0.19
AC027288.3-202ENST00000550268 MTERF3Q96E29 417 aa13.89□□□□□ -0.19
AC027288.3-202ENST00000550268 HSH2DQ96JZ2 352 aa13.89□□□□□ -0.19
AC027288.3-202ENST00000550268 DGCR6LQ9BY27 220 aa13.89□□□□□ -0.19
AC027288.3-202ENST00000550268 RIBC2Q9H4K1 309 aa13.89□□□□□ -0.19
AC027288.3-202ENST00000550268 SLC28A3Q9HAS3 691 aa13.89□□□□□ -0.19
AC027288.3-202ENST00000550268 RC3H2Q9HBD1 1191 aaKnown RBP13.89□□□□□ -0.19
AC027288.3-202ENST00000550268 ACOT13Q9NPJ3 140 aa13.89□□□□□ -0.19
AC027288.3-202ENST00000550268 DKK3Q9UBP4 350 aa13.89□□□□□ -0.19
AC027288.3-202ENST00000550268 ENOPH1Q9UHY7 261 aa13.89□□□□□ -0.19
AC027288.3-202ENST00000550268 VPS4AQ9UN37 437 aa13.89□□□□□ -0.19
AC027288.3-202ENST00000550268 LEFTY2O00292 366 aa13.88□□□□□ -0.19
AC027288.3-202ENST00000550268 FOXE1O00358 373 aaPredicted RBP13.88□□□□□ -0.19
AC027288.3-202ENST00000550268 MAGEB3O15480 346 aa13.88□□□□□ -0.19
AC027288.3-202ENST00000550268 SUV39H1O43463 412 aa13.88□□□□□ -0.19
AC027288.3-202ENST00000550268 ANXA8P13928 327 aa13.88□□□□□ -0.19
AC027288.3-202ENST00000550268 HOXA9P31269 272 aa13.88□□□□□ -0.19
AC027288.3-202ENST00000550268 VLDLRP98155 873 aa13.88□□□□□ -0.19
AC027288.3-202ENST00000550268 RELAQ04206 551 aa13.88□□□□□ -0.19
AC027288.3-202ENST00000550268 OXA1LQ15070 435 aa13.88□□□□□ -0.19
AC027288.3-202ENST00000550268 SLC44A4Q53GD3 710 aa13.88□□□□□ -0.19
AC027288.3-202ENST00000550268 XKR6Q5GH73 641 aa13.88□□□□□ -0.19
AC027288.3-202ENST00000550268 SPOUT1Q5T280 376 aaKnown RBP13.88□□□□□ -0.19
AC027288.3-202ENST00000550268 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.88□□□□□ -0.19
AC027288.3-202ENST00000550268 DPY19L3Q6ZPD9 716 aa13.88□□□□□ -0.19
AC027288.3-202ENST00000550268 VRK3Q8IV63 474 aa13.88□□□□□ -0.19
AC027288.3-202ENST00000550268 NPAS3Q8IXF0 933 aa13.88□□□□□ -0.19
AC027288.3-202ENST00000550268 CNIH3Q8TBE1 160 aa13.88□□□□□ -0.19
AC027288.3-202ENST00000550268 DYNC2LI1Q8TCX1 351 aa13.88□□□□□ -0.19
AC027288.3-202ENST00000550268 ZFP90Q8TF47 636 aa13.88□□□□□ -0.19
AC027288.3-202ENST00000550268 SGCDQ92629 289 aa13.88□□□□□ -0.19
AC027288.3-202ENST00000550268 EGLN2Q96KS0 407 aa13.88□□□□□ -0.19
AC027288.3-202ENST00000550268 DOHHQ9BU89 302 aa13.88□□□□□ -0.19
AC027288.3-202ENST00000550268 CCDC90BQ9GZT6 254 aa13.88□□□□□ -0.19
AC027288.3-202ENST00000550268 ATAD3AQ9NVI7 634 aa13.88□□□□□ -0.19
AC027288.3-202ENST00000550268 THUMPD1Q9NXG2 353 aaKnown RBP13.88□□□□□ -0.19
AC027288.3-202ENST00000550268 KIF17Q9P2E2 1029 aa13.88□□□□□ -0.19
AC027288.3-202ENST00000550268 ERVK-18Q9QC07 812 aa13.88□□□□□ -0.19
AC027288.3-202ENST00000550268 CLEC4EQ9ULY5 219 aa13.88□□□□□ -0.19
AC027288.3-202ENST00000550268 YBX2Q9Y2T7 364 aaKnown RBP13.88□□□□□ -0.19
AC027288.3-202ENST00000550268 ABHD14A-ACY1A0A1B0GW23 586 aa13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 PSMD11O00231 422 aa13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 ZNF197O14709 1029 aa13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 LRG1P02750 347 aa13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 ITGA2P17301 1181 aa13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 OPRL1P41146 370 aa13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 RECQLP46063 649 aaPredicted RBP13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 ELP6Q0PNE2 266 aa13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 SLC14A1Q13336 389 aa13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 DOC2AQ14183 400 aa13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 TOR1AIP1Q5JTV8 583 aa13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 HENMT1Q5T8I9 393 aaKnown RBP13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 ANKRD34AQ69YU3 496 aa13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 AGTRAPQ6RW13 159 aa13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 GET4Q7L5D6 327 aaPredicted RBP13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 SLCO6A1Q86UG4 719 aa13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 LACC1Q8IV20 430 aa13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 ZBTB8BQ8NAP8 495 aaPredicted RBP13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 OR6Q1Q8NGQ2 317 aa13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 SKA2Q8WVK7 121 aaPredicted RBP13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 PMM1Q92871 262 aa13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 HEPHQ9BQS7 1158 aa13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 EHD1Q9H4M9 534 aa13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 ZDHHC6Q9H6R6 413 aa13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 THSD1Q9NS62 852 aa13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 CORINQ9Y5Q5 1042 aa13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 U3KQV3 271 aa13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 SLC5A10A0PJK1 596 aa13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 OR2A25A4D2G3 310 aa13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 ZSCAN9O15535 394 aaPredicted RBP13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 FOXD2O60548 495 aaPredicted RBP13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 MITFO75030 526 aaPredicted RBP13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 FAM20BO75063 409 aa13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 EFCAB14O75071 495 aa13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 IFNA14P01570 189 aa13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 PABPC1P11940 636 aaKnown RBP13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 CDH3P22223 829 aa13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 IDSP22304 550 aa13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 HLA-FP30511 346 aa13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 TIA1P31483 386 aaKnown RBP eCLIP13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 PRLHRP49683 370 aa13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 MLLT10P55197 1068 aa13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 SELENOWP63302 87 aa13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 KCNJ10P78508 379 aa13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 FCHO2Q0JRZ9 810 aa13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 RGNQ15493 299 aa13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 TBCEQ15813 527 aaPredicted RBP13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 FBXO43Q4G163 708 aa13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 DEPDC4Q8N2C3 294 aa13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 NATD1Q8N6N6 113 aa13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 TMCO5AQ8N6Q1 288 aa13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 KIAA1958Q8N8K9 716 aa13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 ATG16L2Q8NAA4 619 aa13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 ZNF540Q8NDQ6 660 aa13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 PHOSPHO2Q8TCD6 241 aa13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 BTN2A2Q8WVV5 523 aa13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 MYDGFQ969H8 173 aa13.87□□□□□ -0.19
AC027288.3-202ENST00000550268 SLC38A4Q969I6 547 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms