RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 PWP1Q13610 501 aa18.43■□□□□ 0.54
DDX54-207ENST00000550016 FAM53BQ14153 422 aa18.43■□□□□ 0.54
DDX54-207ENST00000550016 DOC2AQ14183 400 aa18.43■□□□□ 0.54
DDX54-207ENST00000550016 SLBPQ14493 270 aaKnown RBP eCLIP18.43■□□□□ 0.54
DDX54-207ENST00000550016 TBCCQ15814 346 aa18.43■□□□□ 0.54
DDX54-207ENST00000550016 PRAMEF9Q5VWM5 478 aa18.43■□□□□ 0.54
DDX54-207ENST00000550016 MLIPQ5VWP3 458 aa18.43■□□□□ 0.54
DDX54-207ENST00000550016 C16orf46Q6P387 395 aa18.43■□□□□ 0.54
DDX54-207ENST00000550016 TMIGD1Q6UXZ0 262 aa18.43■□□□□ 0.54
DDX54-207ENST00000550016 GPR155Q7Z3F1 870 aa18.43■□□□□ 0.54
DDX54-207ENST00000550016 ENDOVQ8N8Q3 282 aaKnown RBP18.43■□□□□ 0.54
DDX54-207ENST00000550016 TRPV3Q8NET8 790 aa18.43■□□□□ 0.54
DDX54-207ENST00000550016 STARD8Q92502 1023 aa18.43■□□□□ 0.54
DDX54-207ENST00000550016 MVB12AQ96EY5 273 aa18.43■□□□□ 0.54
DDX54-207ENST00000550016 RUFY1Q96T51 708 aa18.43■□□□□ 0.54
DDX54-207ENST00000550016 MACROD1Q9BQ69 325 aa18.43■□□□□ 0.54
DDX54-207ENST00000550016 ACTL8Q9H568 366 aa18.43■□□□□ 0.54
DDX54-207ENST00000550016 ZNF304Q9HCX3 659 aa18.43■□□□□ 0.54
DDX54-207ENST00000550016 SLC22A11Q9NSA0 550 aa18.43■□□□□ 0.54
DDX54-207ENST00000550016 SCN2AQ99250 2005 aa18.43■□□□□ 0.54
DDX54-207ENST00000550016 GLRA3O75311 464 aa18.42■□□□□ 0.54
DDX54-207ENST00000550016 CREG1O75629 220 aa18.42■□□□□ 0.54
DDX54-207ENST00000550016 SIX3O95343 332 aaPredicted RBP18.42■□□□□ 0.54
DDX54-207ENST00000550016 RECKO95980 971 aa18.42■□□□□ 0.54
DDX54-207ENST00000550016 ATXN8OSP0DMR3 200 aa18.42■□□□□ 0.54
DDX54-207ENST00000550016 EEF1DP29692 281 aaKnown RBP18.42■□□□□ 0.54
DDX54-207ENST00000550016 OR1D4P47884 311 aa18.42■□□□□ 0.54
DDX54-207ENST00000550016 CCT5P48643 541 aa18.42■□□□□ 0.54
DDX54-207ENST00000550016 PIK3CGP48736 1102 aa18.42■□□□□ 0.54
DDX54-207ENST00000550016 CHIT1Q13231 466 aa18.42■□□□□ 0.54
DDX54-207ENST00000550016 GTF2H2Q13888 395 aa18.42■□□□□ 0.54
DDX54-207ENST00000550016 NCF4Q15080 339 aa18.42■□□□□ 0.54
DDX54-207ENST00000550016 CRTC2Q53ET0 693 aaPredicted RBP18.42■□□□□ 0.54
DDX54-207ENST00000550016 GTF2H2CQ6P1K8 395 aa18.42■□□□□ 0.54
DDX54-207ENST00000550016 OVCH1Q7RTY7 1134 aa18.42■□□□□ 0.54
DDX54-207ENST00000550016 ANKRD53Q8N9V6 530 aa18.42■□□□□ 0.54
DDX54-207ENST00000550016 TTLQ8NG68 377 aa18.42■□□□□ 0.54
DDX54-207ENST00000550016 NT5CQ8TCD5 201 aa18.42■□□□□ 0.54
DDX54-207ENST00000550016 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.42■□□□□ 0.54
DDX54-207ENST00000550016 FKBP10Q96AY3 582 aa18.42■□□□□ 0.54
DDX54-207ENST00000550016 EFCAB11Q9BUY7 163 aa18.42■□□□□ 0.54
DDX54-207ENST00000550016 DRC3Q9H069 523 aa18.42■□□□□ 0.54
DDX54-207ENST00000550016 COPG2Q9UBF2 871 aa18.42■□□□□ 0.54
DDX54-207ENST00000550016 GRID1Q9ULK0 1009 aa18.42■□□□□ 0.54
DDX54-207ENST00000550016 LAMA5O15230 3695 aa18.41■□□□□ 0.54
DDX54-207ENST00000550016 CCDC151A5D8V7 595 aa18.41■□□□□ 0.54
DDX54-207ENST00000550016 E2F3O00716 465 aa18.41■□□□□ 0.54
DDX54-207ENST00000550016 NKX2-8O15522 239 aa18.41■□□□□ 0.54
DDX54-207ENST00000550016 NDUFS4O43181 175 aa18.41■□□□□ 0.54
DDX54-207ENST00000550016 FOXS1O43638 330 aa18.41■□□□□ 0.54
DDX54-207ENST00000550016 WFS1O76024 890 aa18.41■□□□□ 0.54
DDX54-207ENST00000550016 ALBP02768 609 aa18.41■□□□□ 0.54
DDX54-207ENST00000550016 SERPIND1P05546 499 aa18.41■□□□□ 0.54
DDX54-207ENST00000550016 KRT4P19013 534 aa18.41■□□□□ 0.54
DDX54-207ENST00000550016 GSTM2P28161 218 aa18.41■□□□□ 0.54
DDX54-207ENST00000550016 CRHR1P34998 444 aa18.41■□□□□ 0.54
DDX54-207ENST00000550016 RPS18P62269 152 aaKnown RBP18.41■□□□□ 0.54
DDX54-207ENST00000550016 SLC18A2Q05940 514 aa18.41■□□□□ 0.54
DDX54-207ENST00000550016 RGS1Q08116 209 aa18.41■□□□□ 0.54
DDX54-207ENST00000550016 E2F2Q14209 437 aa18.41■□□□□ 0.54
DDX54-207ENST00000550016 SLC9A5Q14940 896 aa18.41■□□□□ 0.54
DDX54-207ENST00000550016 HIST2H2ACQ16777 129 aaPredicted RBP18.41■□□□□ 0.54
DDX54-207ENST00000550016 PAGE2BQ5JRK9 111 aa18.41■□□□□ 0.54
DDX54-207ENST00000550016 HIST2H2AA3Q6FI13 130 aa18.41■□□□□ 0.54
DDX54-207ENST00000550016 TMEM214Q6NUQ4 689 aaKnown RBP18.41■□□□□ 0.54
DDX54-207ENST00000550016 SYVN1Q86TM6 617 aa18.41■□□□□ 0.54
DDX54-207ENST00000550016 TRABD2AQ86V40 505 aa18.41■□□□□ 0.54
DDX54-207ENST00000550016 IQCKQ8N0W5 287 aa18.41■□□□□ 0.54
DDX54-207ENST00000550016 DTWD1Q8N5C7 304 aa18.41■□□□□ 0.54
DDX54-207ENST00000550016 METTL27Q8N6F8 245 aaPredicted RBP18.41■□□□□ 0.54
DDX54-207ENST00000550016 KCT2Q8NC54 265 aa18.41■□□□□ 0.54
DDX54-207ENST00000550016 COL26A1Q96A83 441 aa18.41■□□□□ 0.54
DDX54-207ENST00000550016 MOCOSQ96EN8 888 aa18.41■□□□□ 0.54
DDX54-207ENST00000550016 SEC16BQ96JE7 1060 aa18.41■□□□□ 0.54
DDX54-207ENST00000550016 TCFL5Q9UL49 500 aa18.41■□□□□ 0.54
DDX54-207ENST00000550016 ZNF490Q9ULM2 529 aaPredicted RBP18.41■□□□□ 0.54
DDX54-207ENST00000550016 PADI2Q9Y2J8 665 aa18.41■□□□□ 0.54
DDX54-207ENST00000550016 MRPS2Q9Y399 296 aaKnown RBP18.41■□□□□ 0.54
DDX54-207ENST00000550016 MAU2Q9Y6X3 613 aa18.41■□□□□ 0.54
DDX54-207ENST00000550016 ITPR1Q14643 2758 aa18.41■□□□□ 0.54
DDX54-207ENST00000550016 A8MT66 165 aa18.4■□□□□ 0.54
DDX54-207ENST00000550016 COPEO14579 308 aa18.4■□□□□ 0.54
DDX54-207ENST00000550016 PRPF4O43172 522 aaKnown RBP eCLIP18.4■□□□□ 0.54
DDX54-207ENST00000550016 CD22P20273 847 aa18.4■□□□□ 0.54
DDX54-207ENST00000550016 NFKB2Q00653 900 aa18.4■□□□□ 0.54
DDX54-207ENST00000550016 MRPL14Q6P1L8 145 aaKnown RBP18.4■□□□□ 0.54
DDX54-207ENST00000550016 COX15Q7KZN9 410 aa18.4■□□□□ 0.54
DDX54-207ENST00000550016 GOLGA7Q7Z5G4 137 aa18.4■□□□□ 0.54
DDX54-207ENST00000550016 CREB3L4Q8TEY5 395 aa18.4■□□□□ 0.54
DDX54-207ENST00000550016 MMABQ96EY8 250 aaPredicted RBP18.4■□□□□ 0.54
DDX54-207ENST00000550016 IPPKQ9H8X2 491 aa18.4■□□□□ 0.54
DDX54-207ENST00000550016 EMCNQ9ULC0 261 aa18.4■□□□□ 0.54
DDX54-207ENST00000550016 SLC22A7Q9Y694 548 aa18.4■□□□□ 0.54
DDX54-207ENST00000550016 CFAP47Q6ZTR5 3102 aa18.4■□□□□ 0.54
DDX54-207ENST00000550016 A0A0A6YYC8 382 aaPredicted RBP18.39■□□□□ 0.53
DDX54-207ENST00000550016 ANKDD1BA6NHY2 528 aa18.39■□□□□ 0.53
DDX54-207ENST00000550016 I3L1I5 382 aaPredicted RBP18.39■□□□□ 0.53
DDX54-207ENST00000550016 DLX3O60479 287 aa18.39■□□□□ 0.53
DDX54-207ENST00000550016 KLF7O75840 302 aaPredicted RBP18.39■□□□□ 0.53
DDX54-207ENST00000550016 SERPINA6P08185 405 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms