RNA–Protein interactions for RNA: ENST00000549833.1

UBE2N-204, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 3 BASIC

Gene UBE2N, Length 960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-204ENST00000549833 DET1Q7L5Y6 550 aa6.28□□□□□ -1.4
UBE2N-204ENST00000549833 TMEM135Q86UB9 458 aa6.28□□□□□ -1.4
UBE2N-204ENST00000549833 SERPINA9Q86WD7 417 aa6.28□□□□□ -1.4
UBE2N-204ENST00000549833 PPP1R3BQ86XI6 285 aa6.28□□□□□ -1.4
UBE2N-204ENST00000549833 GATAD2AQ86YP4 633 aa6.28□□□□□ -1.4
UBE2N-204ENST00000549833 ZBED8Q8IZ13 594 aa6.28□□□□□ -1.4
UBE2N-204ENST00000549833 OTUD6BQ8N6M0 293 aa6.28□□□□□ -1.4
UBE2N-204ENST00000549833 FBXO36Q8NEA4 188 aa6.28□□□□□ -1.4
UBE2N-204ENST00000549833 DDHD1Q8NEL9 900 aa6.28□□□□□ -1.4
UBE2N-204ENST00000549833 OR4L1Q8NH43 312 aa6.28□□□□□ -1.4
UBE2N-204ENST00000549833 CCL4L1Q8NHW4 92 aa6.28□□□□□ -1.4
UBE2N-204ENST00000549833 DTX3LQ8TDB6 740 aa6.28□□□□□ -1.4
UBE2N-204ENST00000549833 LMX1AQ8TE12 382 aa6.28□□□□□ -1.4
UBE2N-204ENST00000549833 PEX13Q92968 403 aa6.28□□□□□ -1.4
UBE2N-204ENST00000549833 ULK4Q96C45 1275 aa6.28□□□□□ -1.4
UBE2N-204ENST00000549833 MARS2Q96GW9 593 aaKnown RBP6.28□□□□□ -1.4
UBE2N-204ENST00000549833 C19orf43Q9BQ61 176 aa6.28□□□□□ -1.4
UBE2N-204ENST00000549833 LRRC61Q9BV99 259 aa6.28□□□□□ -1.4
UBE2N-204ENST00000549833 ALOXE3Q9BYJ1 711 aa6.28□□□□□ -1.4
UBE2N-204ENST00000549833 ERVMER34-1Q9H9K5 563 aa6.28□□□□□ -1.4
UBE2N-204ENST00000549833 RRAGDQ9NQL2 400 aaPredicted RBP6.28□□□□□ -1.4
UBE2N-204ENST00000549833 TM7SF3Q9NS93 570 aa6.28□□□□□ -1.4
UBE2N-204ENST00000549833 SMOXQ9NWM0 555 aa6.28□□□□□ -1.4
UBE2N-204ENST00000549833 CDYLQ9Y232 598 aa6.28□□□□□ -1.4
UBE2N-204ENST00000549833 SLC17A4Q9Y2C5 497 aa6.28□□□□□ -1.4
UBE2N-204ENST00000549833 PLEKHM1Q9Y4G2 1056 aa6.28□□□□□ -1.4
UBE2N-204ENST00000549833 PCDHGB2Q9Y5G2 931 aa6.28□□□□□ -1.4
UBE2N-204ENST00000549833 FAM169AQ9Y6X4 670 aa6.28□□□□□ -1.4
UBE2N-204ENST00000549833 ACACAQ13085 2346 aa6.28□□□□□ -1.4
UBE2N-204ENST00000549833 SCN3AQ9NY46 2000 aa6.27□□□□□ -1.41
UBE2N-204ENST00000549833 TPRP12270 2363 aaKnown RBP6.27□□□□□ -1.41
UBE2N-204ENST00000549833 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.27□□□□□ -1.41
UBE2N-204ENST00000549833 MAGEB16A2A368 324 aa6.27□□□□□ -1.41
UBE2N-204ENST00000549833 UNC119BA6NIH7 251 aa6.27□□□□□ -1.41
UBE2N-204ENST00000549833 OR2AG2A6NM03 316 aa6.27□□□□□ -1.41
UBE2N-204ENST00000549833 C4orf47A7E2U8 309 aa6.27□□□□□ -1.41
UBE2N-204ENST00000549833 AGAP14A8MT82 685 aa6.27□□□□□ -1.41
UBE2N-204ENST00000549833 F8W8V4 182 aa6.27□□□□□ -1.41
UBE2N-204ENST00000549833 CD3EAPO15446 510 aaKnown RBP6.27□□□□□ -1.41
UBE2N-204ENST00000549833 FFAR2O15552 330 aa6.27□□□□□ -1.41
UBE2N-204ENST00000549833 GRID2O43424 1007 aa6.27□□□□□ -1.41
UBE2N-204ENST00000549833 OR1I1O60431 355 aa6.27□□□□□ -1.41
UBE2N-204ENST00000549833 PIAS2O75928 621 aa6.27□□□□□ -1.41
UBE2N-204ENST00000549833 CDK14O94921 469 aa6.27□□□□□ -1.41
UBE2N-204ENST00000549833 TNFP01375 233 aa6.27□□□□□ -1.41
UBE2N-204ENST00000549833 CSF2P04141 144 aa6.27□□□□□ -1.41
UBE2N-204ENST00000549833 POLBP06746 335 aa6.27□□□□□ -1.41
UBE2N-204ENST00000549833 IVLP07476 585 aa6.27□□□□□ -1.41
UBE2N-204ENST00000549833 ERVK-10P10266 1014 aa6.27□□□□□ -1.41
UBE2N-204ENST00000549833 ACP5P13686 325 aa6.27□□□□□ -1.41
UBE2N-204ENST00000549833 MSH3P20585 1137 aa6.27□□□□□ -1.41
UBE2N-204ENST00000549833 DGKAP23743 735 aa6.27□□□□□ -1.41
UBE2N-204ENST00000549833 EPHA8P29322 1005 aaPredicted RBP6.27□□□□□ -1.41
UBE2N-204ENST00000549833 PBLDP30039 288 aaPredicted RBP6.27□□□□□ -1.41
UBE2N-204ENST00000549833 PLA2G5P39877 138 aa6.27□□□□□ -1.41
UBE2N-204ENST00000549833 MAGEA4P43358 317 aa6.27□□□□□ -1.41
UBE2N-204ENST00000549833 ABCG1P45844 678 aa6.27□□□□□ -1.41
UBE2N-204ENST00000549833 RXRGP48443 463 aa6.27□□□□□ -1.41
UBE2N-204ENST00000549833 ARRB1P49407 418 aaPredicted RBP6.27□□□□□ -1.41
UBE2N-204ENST00000549833 CCT8P50990 548 aa6.27□□□□□ -1.41
UBE2N-204ENST00000549833 SUMO3P55854 103 aaPredicted RBP6.27□□□□□ -1.41
UBE2N-204ENST00000549833 GPX6P59796 221 aa6.27□□□□□ -1.41
UBE2N-204ENST00000549833 CXADRP78310 365 aa6.27□□□□□ -1.41
UBE2N-204ENST00000549833 TMEM115Q12893 351 aaPredicted RBP6.27□□□□□ -1.41
UBE2N-204ENST00000549833 PDCD2Q16342 344 aaPredicted RBP6.27□□□□□ -1.41
UBE2N-204ENST00000549833 GPR33Q49SQ1 333 aa6.27□□□□□ -1.41
UBE2N-204ENST00000549833 PYCR3Q53H96 274 aa6.27□□□□□ -1.41
UBE2N-204ENST00000549833 KHDC1LQ5JSQ8 128 aa6.27□□□□□ -1.41
UBE2N-204ENST00000549833 SPANXN3Q5MJ09 141 aa6.27□□□□□ -1.41
UBE2N-204ENST00000549833 UBAP2Q5T6F2 1119 aaKnown RBP6.27□□□□□ -1.41
UBE2N-204ENST00000549833 STPG1Q5TH74 334 aa6.27□□□□□ -1.41
UBE2N-204ENST00000549833 ARMC3Q5W041 872 aa6.27□□□□□ -1.41
UBE2N-204ENST00000549833 B3GNTL1Q67FW5 361 aaPredicted RBP6.27□□□□□ -1.41
UBE2N-204ENST00000549833 ZNF470Q6ECI4 717 aa6.27□□□□□ -1.41
UBE2N-204ENST00000549833 NEPROQ6NW34 567 aa6.27□□□□□ -1.41
UBE2N-204ENST00000549833 KCNMB4Q86W47 210 aa6.27□□□□□ -1.41
UBE2N-204ENST00000549833 PDSS2Q86YH6 399 aa6.27□□□□□ -1.41
UBE2N-204ENST00000549833 GALNT13Q8IUC8 556 aa6.27□□□□□ -1.41
UBE2N-204ENST00000549833 TRAPPC5Q8IUR0 188 aa6.27□□□□□ -1.41
UBE2N-204ENST00000549833 ZNF547Q8IVP9 402 aa6.27□□□□□ -1.41
UBE2N-204ENST00000549833 IFT20Q8IY31 132 aa6.27□□□□□ -1.41
UBE2N-204ENST00000549833 RASGEF1AQ8N9B8 481 aa6.27□□□□□ -1.41
UBE2N-204ENST00000549833 ZNF548Q8NEK5 533 aaPredicted RBP6.27□□□□□ -1.41
UBE2N-204ENST00000549833 SAP25Q8TEE9 199 aa6.27□□□□□ -1.41
UBE2N-204ENST00000549833 PYROXD1Q8WU10 500 aa6.27□□□□□ -1.41
UBE2N-204ENST00000549833 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.27□□□□□ -1.41
UBE2N-204ENST00000549833 LRRC39Q96DD0 335 aa6.27□□□□□ -1.41
UBE2N-204ENST00000549833 SGF29Q96ES7 293 aa6.27□□□□□ -1.41
UBE2N-204ENST00000549833 C9orf72Q96LT7 481 aa6.27□□□□□ -1.41
UBE2N-204ENST00000549833 OR2M4Q96R27 311 aa6.27□□□□□ -1.41
UBE2N-204ENST00000549833 COPS8Q99627 209 aa6.27□□□□□ -1.41
UBE2N-204ENST00000549833 CLPBQ9H078 707 aa6.27□□□□□ -1.41
UBE2N-204ENST00000549833 ANKZF1Q9H8Y5 726 aa6.27□□□□□ -1.41
UBE2N-204ENST00000549833 TMEM9BQ9NQ34 198 aa6.27□□□□□ -1.41
UBE2N-204ENST00000549833 IARS2Q9NSE4 1012 aaKnown RBP6.27□□□□□ -1.41
UBE2N-204ENST00000549833 C20orf96Q9NUD7 363 aaPredicted RBP6.27□□□□□ -1.41
UBE2N-204ENST00000549833 VPS18Q9P253 973 aa6.27□□□□□ -1.41
UBE2N-204ENST00000549833 SLC17A6Q9P2U8 582 aa6.27□□□□□ -1.41
UBE2N-204ENST00000549833 CPNE7Q9UBL6 633 aa6.27□□□□□ -1.41
UBE2N-204ENST00000549833 DKK2Q9UBU2 259 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms