RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 RAD51BO15315 384 aa10.71□□□□□ -0.69
LINC00661-204ENST00000549354 PDYNP01213 254 aa10.71□□□□□ -0.69
LINC00661-204ENST00000549354 SERPIND1P05546 499 aa10.71□□□□□ -0.69
LINC00661-204ENST00000549354 EPB42P16452 691 aa10.71□□□□□ -0.69
LINC00661-204ENST00000549354 CD36P16671 472 aa10.71□□□□□ -0.69
LINC00661-204ENST00000549354 NFATC2Q13469 925 aa10.71□□□□□ -0.69
LINC00661-204ENST00000549354 SF3B4Q15427 424 aaKnown RBP eCLIP10.71□□□□□ -0.69
LINC00661-204ENST00000549354 C9orf50Q5SZB4 431 aa10.71□□□□□ -0.69
LINC00661-204ENST00000549354 DPY19L3Q6ZPD9 716 aa10.71□□□□□ -0.69
LINC00661-204ENST00000549354 SPATC1Q76KD6 591 aa10.71□□□□□ -0.69
LINC00661-204ENST00000549354 ADGRD2Q7Z7M1 963 aa10.71□□□□□ -0.69
LINC00661-204ENST00000549354 OR2A12Q8NGT7 310 aa10.71□□□□□ -0.69
LINC00661-204ENST00000549354 MUL1Q969V5 352 aa10.71□□□□□ -0.69
LINC00661-204ENST00000549354 HTATIP2Q9BUP3 242 aa10.71□□□□□ -0.69
LINC00661-204ENST00000549354 SLC27A6Q9Y2P4 619 aa10.71□□□□□ -0.69
LINC00661-204ENST00000549354 DHRS7Q9Y394 339 aa10.71□□□□□ -0.69
LINC00661-204ENST00000549354 MRPS23Q9Y3D9 190 aaKnown RBP10.71□□□□□ -0.69
LINC00661-204ENST00000549354 CFAP20Q9Y6A4 193 aaKnown RBP10.71□□□□□ -0.69
LINC00661-204ENST00000549354 KIF26AQ9ULI4 1882 aaPredicted RBP10.71□□□□□ -0.69
LINC00661-204ENST00000549354 NPIPB15A6NHN6 443 aaPredicted RBP10.71□□□□□ -0.69
LINC00661-204ENST00000549354 FAM227AF5H4B4 570 aa10.71□□□□□ -0.69
LINC00661-204ENST00000549354 BCKDHAP12694 445 aa10.71□□□□□ -0.69
LINC00661-204ENST00000549354 SLC19A1P41440 591 aa10.71□□□□□ -0.69
LINC00661-204ENST00000549354 STARD3Q14849 445 aa10.71□□□□□ -0.69
LINC00661-204ENST00000549354 CLCA4Q14CN2 919 aa10.71□□□□□ -0.69
LINC00661-204ENST00000549354 PTCHD3Q3KNS1 767 aa10.71□□□□□ -0.69
LINC00661-204ENST00000549354 COQ5Q5HYK3 327 aa10.71□□□□□ -0.69
LINC00661-204ENST00000549354 CACHD1Q5VU97 1274 aa10.71□□□□□ -0.69
LINC00661-204ENST00000549354 PIK3C3Q8NEB9 887 aa10.71□□□□□ -0.69
LINC00661-204ENST00000549354 NELL1Q92832 810 aa10.71□□□□□ -0.69
LINC00661-204ENST00000549354 SLC35B4Q969S0 331 aa10.71□□□□□ -0.69
LINC00661-204ENST00000549354 GTPBP3Q969Y2 492 aaKnown RBP10.71□□□□□ -0.69
LINC00661-204ENST00000549354 ZHX1-C8orf76Q96EF9 292 aa10.71□□□□□ -0.69
LINC00661-204ENST00000549354 TMEFF2Q9UIK5 374 aaPredicted RBP10.71□□□□□ -0.69
LINC00661-204ENST00000549354 PCDHGA10Q9Y5H3 936 aa10.71□□□□□ -0.69
LINC00661-204ENST00000549354 WNT6Q9Y6F9 365 aa10.71□□□□□ -0.69
LINC00661-204ENST00000549354 ANKRD28O15084 1053 aa10.71□□□□□ -0.7
LINC00661-204ENST00000549354 RGS5O15539 181 aa10.71□□□□□ -0.7
LINC00661-204ENST00000549354 SRPRAP08240 638 aaKnown RBP10.71□□□□□ -0.7
LINC00661-204ENST00000549354 C7P10643 843 aa10.71□□□□□ -0.7
LINC00661-204ENST00000549354 TCEA1P23193 301 aaKnown RBP10.71□□□□□ -0.7
LINC00661-204ENST00000549354 SOAT1P35610 550 aa10.71□□□□□ -0.7
LINC00661-204ENST00000549354 GNPDA1P46926 289 aa10.71□□□□□ -0.7
LINC00661-204ENST00000549354 DHCR24Q15392 516 aa10.71□□□□□ -0.7
LINC00661-204ENST00000549354 FAM214AQ32MH5 1076 aa10.71□□□□□ -0.7
LINC00661-204ENST00000549354 CCSMST1Q4G0I0 132 aa10.71□□□□□ -0.7
LINC00661-204ENST00000549354 ZDHHC20Q5W0Z9 365 aa10.71□□□□□ -0.7
LINC00661-204ENST00000549354 MCFD2Q8NI22 146 aa10.71□□□□□ -0.7
LINC00661-204ENST00000549354 RSPRY1Q96DX4 576 aa10.71□□□□□ -0.7
LINC00661-204ENST00000549354 ZNF382Q96SR6 550 aa10.71□□□□□ -0.7
LINC00661-204ENST00000549354 NUSAP1Q9BXS6 441 aaKnown RBP10.71□□□□□ -0.7
LINC00661-204ENST00000549354 YTHDF1Q9BYJ9 559 aaKnown RBP10.71□□□□□ -0.7
LINC00661-204ENST00000549354 TRPV4Q9HBA0 871 aa10.71□□□□□ -0.7
LINC00661-204ENST00000549354 C5AR2Q9P296 337 aa10.71□□□□□ -0.7
LINC00661-204ENST00000549354 YBX2Q9Y2T7 364 aaKnown RBP10.71□□□□□ -0.7
LINC00661-204ENST00000549354 NEUROG3Q9Y4Z2 214 aa10.71□□□□□ -0.7
LINC00661-204ENST00000549354 PLK4O00444 970 aa10.7□□□□□ -0.7
LINC00661-204ENST00000549354 STX16O14662 325 aa10.7□□□□□ -0.7
LINC00661-204ENST00000549354 AREL1O15033 823 aa10.7□□□□□ -0.7
LINC00661-204ENST00000549354 CYP17A1P05093 508 aa10.7□□□□□ -0.7
LINC00661-204ENST00000549354 ALOX12P18054 663 aa10.7□□□□□ -0.7
LINC00661-204ENST00000549354 PCMT1P22061 227 aa10.7□□□□□ -0.7
LINC00661-204ENST00000549354 ACRV1P26436 265 aa10.7□□□□□ -0.7
LINC00661-204ENST00000549354 SERPINB1P30740 379 aa10.7□□□□□ -0.7
LINC00661-204ENST00000549354 SPAM1P38567 509 aa10.7□□□□□ -0.7
LINC00661-204ENST00000549354 CRATP43155 626 aa10.7□□□□□ -0.7
LINC00661-204ENST00000549354 RNF144AP50876 292 aaPredicted RBP10.7□□□□□ -0.7
LINC00661-204ENST00000549354 PTSQ03393 145 aa10.7□□□□□ -0.7
LINC00661-204ENST00000549354 CBX2Q14781 532 aaPredicted RBP10.7□□□□□ -0.7
LINC00661-204ENST00000549354 DGUOKQ16854 277 aa10.7□□□□□ -0.7
LINC00661-204ENST00000549354 C1QTNF12Q5T7M4 302 aa10.7□□□□□ -0.7
LINC00661-204ENST00000549354 MACC1Q6ZN28 852 aa10.7□□□□□ -0.7
LINC00661-204ENST00000549354 USP45Q70EL2 814 aa10.7□□□□□ -0.7
LINC00661-204ENST00000549354 SYT12Q8IV01 421 aa10.7□□□□□ -0.7
LINC00661-204ENST00000549354 RBFAQ8N0V3 343 aa10.7□□□□□ -0.7
LINC00661-204ENST00000549354 FAM83FQ8NEG4 500 aaPredicted RBP10.7□□□□□ -0.7
LINC00661-204ENST00000549354 WFIKKN2Q8TEU8 576 aa10.7□□□□□ -0.7
LINC00661-204ENST00000549354 SH3KBP1Q96B97 665 aa10.7□□□□□ -0.7
LINC00661-204ENST00000549354 LGALS12Q96DT0 336 aa10.7□□□□□ -0.7
LINC00661-204ENST00000549354 FAM126AQ9BYI3 521 aaPredicted RBP10.7□□□□□ -0.7
LINC00661-204ENST00000549354 MUC13Q9H3R2 512 aa10.7□□□□□ -0.7
LINC00661-204ENST00000549354 OBP2AQ9NY56 170 aa10.7□□□□□ -0.7
LINC00661-204ENST00000549354 KLHL42Q9P2K6 505 aa10.7□□□□□ -0.7
LINC00661-204ENST00000549354 TAPBPO15533 448 aa10.7□□□□□ -0.7
LINC00661-204ENST00000549354 COX7A2P14406 83 aa10.7□□□□□ -0.7
LINC00661-204ENST00000549354 ZNF7P17097 686 aaPredicted RBP10.7□□□□□ -0.7
LINC00661-204ENST00000549354 JUNBP17275 347 aaPredicted RBP10.7□□□□□ -0.7
LINC00661-204ENST00000549354 ITGALP20701 1170 aa10.7□□□□□ -0.7
LINC00661-204ENST00000549354 CD6P30203 668 aa10.7□□□□□ -0.7
LINC00661-204ENST00000549354 FEN1P39748 380 aaKnown RBP10.7□□□□□ -0.7
LINC00661-204ENST00000549354 RGS4P49798 205 aa10.7□□□□□ -0.7
LINC00661-204ENST00000549354 ST13P50502 369 aaKnown RBP10.7□□□□□ -0.7
LINC00661-204ENST00000549354 DAPP51397 102 aa10.7□□□□□ -0.7
LINC00661-204ENST00000549354 RPS26P62854 115 aaKnown RBP10.7□□□□□ -0.7
LINC00661-204ENST00000549354 TRAF3Q13114 568 aa10.7□□□□□ -0.7
LINC00661-204ENST00000549354 TUBA3CQ13748 450 aa10.7□□□□□ -0.7
LINC00661-204ENST00000549354 PCBP2Q15366 365 aaKnown RBP eCLIP10.7□□□□□ -0.7
LINC00661-204ENST00000549354 HKDC1Q2TB90 917 aa10.7□□□□□ -0.7
LINC00661-204ENST00000549354 ATP13A5Q4VNC0 1218 aa10.7□□□□□ -0.7
LINC00661-204ENST00000549354 BRAT1Q6PJG6 821 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms