RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 PAPD4Q6PIY7 484 aaKnown RBP19.21■□□□□ 0.67
SSH1-207ENST00000547862 AGTRAPQ6RW13 159 aa19.21■□□□□ 0.67
SSH1-207ENST00000547862 MRGPRGQ86SM5 289 aa19.21■□□□□ 0.67
SSH1-207ENST00000547862 SLC26A11Q86WA9 606 aa19.21■□□□□ 0.67
SSH1-207ENST00000547862 PDSS2Q86YH6 399 aa19.21■□□□□ 0.67
SSH1-207ENST00000547862 CRLF3Q8IUI8 442 aa19.21■□□□□ 0.67
SSH1-207ENST00000547862 PALM2Q8IXS6 379 aa19.21■□□□□ 0.67
SSH1-207ENST00000547862 MYO1HQ8N1T3 1032 aa19.21■□□□□ 0.67
SSH1-207ENST00000547862 MCUQ8NE86 351 aa19.21■□□□□ 0.67
SSH1-207ENST00000547862 EEF1AKMT1Q8WVE0 214 aa19.21■□□□□ 0.67
SSH1-207ENST00000547862 TSLPQ969D9 159 aa19.21■□□□□ 0.67
SSH1-207ENST00000547862 LINGO1Q96FE5 620 aa19.21■□□□□ 0.67
SSH1-207ENST00000547862 SIGLEC12Q96PQ1 595 aa19.21■□□□□ 0.67
SSH1-207ENST00000547862 NAALAD2Q9Y3Q0 740 aa19.21■□□□□ 0.67
SSH1-207ENST00000547862 WISP2O76076 250 aa19.2■□□□□ 0.66
SSH1-207ENST00000547862 SERPIND1P05546 499 aa19.2■□□□□ 0.66
SSH1-207ENST00000547862 SLC35G6P0C7Q6 338 aa19.2■□□□□ 0.66
SSH1-207ENST00000547862 MYBL2P10244 700 aa19.2■□□□□ 0.66
SSH1-207ENST00000547862 HRH2P25021 359 aa19.2■□□□□ 0.66
SSH1-207ENST00000547862 CA7P43166 264 aa19.2■□□□□ 0.66
SSH1-207ENST00000547862 OLR1P78380 273 aa19.2■□□□□ 0.66
SSH1-207ENST00000547862 ABRAXAS2Q15018 415 aa19.2■□□□□ 0.66
SSH1-207ENST00000547862 SFT2D3Q587I9 215 aa19.2■□□□□ 0.66
SSH1-207ENST00000547862 ACER2Q5QJU3 275 aa19.2■□□□□ 0.66
SSH1-207ENST00000547862 RBM20Q5T481 1227 aaKnown RBP19.2■□□□□ 0.66
SSH1-207ENST00000547862 ZNF662Q6ZS27 426 aa19.2■□□□□ 0.66
SSH1-207ENST00000547862 OR5T3Q8NGG3 340 aa19.2■□□□□ 0.66
SSH1-207ENST00000547862 DNAJB8Q8NHS0 232 aa19.2■□□□□ 0.66
SSH1-207ENST00000547862 SLC13A3Q8WWT9 602 aa19.2■□□□□ 0.66
SSH1-207ENST00000547862 MAGED4Q96JG8 741 aa19.2■□□□□ 0.66
SSH1-207ENST00000547862 ZNF354BQ96LW1 612 aa19.2■□□□□ 0.66
SSH1-207ENST00000547862 PCBD2Q9H0N5 130 aa19.2■□□□□ 0.66
SSH1-207ENST00000547862 SLC17A6Q9P2U8 582 aa19.2■□□□□ 0.66
SSH1-207ENST00000547862 CSMD1Q96PZ7 3565 aa19.19■□□□□ 0.66
SSH1-207ENST00000547862 PABPN1LA6NDY0 278 aaKnown RBP19.19■□□□□ 0.66
SSH1-207ENST00000547862 TTI1O43156 1089 aa19.19■□□□□ 0.66
SSH1-207ENST00000547862 NDUFS4O43181 175 aa19.19■□□□□ 0.66
SSH1-207ENST00000547862 LCMT2O60294 686 aaKnown RBP19.19■□□□□ 0.66
SSH1-207ENST00000547862 MAN1A2O60476 641 aa19.19■□□□□ 0.66
SSH1-207ENST00000547862 C8GP07360 202 aa19.19■□□□□ 0.66
SSH1-207ENST00000547862 GRK3P35626 688 aa19.19■□□□□ 0.66
SSH1-207ENST00000547862 MAGEA3P43357 314 aa19.19■□□□□ 0.66
SSH1-207ENST00000547862 AGTR2P50052 363 aa19.19■□□□□ 0.66
SSH1-207ENST00000547862 OC90Q02509 493 aaPredicted RBP19.19■□□□□ 0.66
SSH1-207ENST00000547862 ACTN3Q08043 901 aaPredicted RBP19.19■□□□□ 0.66
SSH1-207ENST00000547862 TUBA3CQ13748 450 aa19.19■□□□□ 0.66
SSH1-207ENST00000547862 CRYMQ14894 314 aa19.19■□□□□ 0.66
SSH1-207ENST00000547862 PHKG1Q16816 387 aa19.19■□□□□ 0.66
SSH1-207ENST00000547862 CAPN13Q6MZZ7 669 aaPredicted RBP19.19■□□□□ 0.66
SSH1-207ENST00000547862 UGT3A1Q6NUS8 523 aa19.19■□□□□ 0.66
SSH1-207ENST00000547862 TUBA3EQ6PEY2 450 aa19.19■□□□□ 0.66
SSH1-207ENST00000547862 PAQR3Q6TCH7 311 aa19.19■□□□□ 0.66
SSH1-207ENST00000547862 LMNTD2Q8IXW0 634 aa19.19■□□□□ 0.66
SSH1-207ENST00000547862 PYCR2Q96C36 320 aa19.19■□□□□ 0.66
SSH1-207ENST00000547862 THAP11Q96EK4 314 aa19.19■□□□□ 0.66
SSH1-207ENST00000547862 MOCOSQ96EN8 888 aa19.19■□□□□ 0.66
SSH1-207ENST00000547862 SIGLEC10Q96LC7 697 aa19.19■□□□□ 0.66
SSH1-207ENST00000547862 TINAGQ9UJW2 476 aa19.19■□□□□ 0.66
SSH1-207ENST00000547862 PPP2R2CQ9Y2T4 447 aa19.19■□□□□ 0.66
SSH1-207ENST00000547862 EIF3FO00303 357 aaPredicted RBP19.18■□□□□ 0.66
SSH1-207ENST00000547862 SLC19A2O60779 497 aa19.18■□□□□ 0.66
SSH1-207ENST00000547862 B3GALT4O96024 378 aa19.18■□□□□ 0.66
SSH1-207ENST00000547862 PGGT1BP53609 377 aa19.18■□□□□ 0.66
SSH1-207ENST00000547862 CASP6P55212 293 aa19.18■□□□□ 0.66
SSH1-207ENST00000547862 CDKN2DP55273 166 aa19.18■□□□□ 0.66
SSH1-207ENST00000547862 CCZ1BP86790 482 aa19.18■□□□□ 0.66
SSH1-207ENST00000547862 CCZ1P86791 482 aaPredicted RBP19.18■□□□□ 0.66
SSH1-207ENST00000547862 DHX9Q08211 1270 aaKnown RBP19.18■□□□□ 0.66
SSH1-207ENST00000547862 SP140Q13342 867 aa19.18■□□□□ 0.66
SSH1-207ENST00000547862 OR1C1Q15619 314 aa19.18■□□□□ 0.66
SSH1-207ENST00000547862 NSDHLQ15738 373 aa19.18■□□□□ 0.66
SSH1-207ENST00000547862 EXT1Q16394 746 aa19.18■□□□□ 0.66
SSH1-207ENST00000547862 C3AR1Q16581 482 aa19.18■□□□□ 0.66
SSH1-207ENST00000547862 MEP1AQ16819 746 aa19.18■□□□□ 0.66
SSH1-207ENST00000547862 LRRC8EQ6NSJ5 796 aa19.18■□□□□ 0.66
SSH1-207ENST00000547862 NAT8LQ8N9F0 302 aa19.18■□□□□ 0.66
SSH1-207ENST00000547862 NPAS2Q99743 824 aa19.18■□□□□ 0.66
SSH1-207ENST00000547862 UTP23Q9BRU9 249 aaKnown RBP19.18■□□□□ 0.66
SSH1-207ENST00000547862 PARVBQ9HBI1 364 aa19.18■□□□□ 0.66
SSH1-207ENST00000547862 TAS2R13Q9NYV9 303 aa19.18■□□□□ 0.66
SSH1-207ENST00000547862 PCNX1Q96RV3 2341 aa19.18■□□□□ 0.66
SSH1-207ENST00000547862 KCNE1BA0A087WTH5 132 aa19.17■□□□□ 0.66
SSH1-207ENST00000547862 GABRR3A8MPY1 467 aa19.17■□□□□ 0.66
SSH1-207ENST00000547862 PGRMC1O00264 195 aaKnown RBP19.17■□□□□ 0.66
SSH1-207ENST00000547862 CYC1P08574 325 aa19.17■□□□□ 0.66
SSH1-207ENST00000547862 PGAM1P18669 254 aa19.17■□□□□ 0.66
SSH1-207ENST00000547862 HTR1EP28566 365 aa19.17■□□□□ 0.66
SSH1-207ENST00000547862 OR4D2P58180 307 aa19.17■□□□□ 0.66
SSH1-207ENST00000547862 TIAL1Q01085 375 aaKnown RBP eCLIP19.17■□□□□ 0.66
SSH1-207ENST00000547862 RHAGQ02094 409 aa19.17■□□□□ 0.66
SSH1-207ENST00000547862 ART3Q13508 389 aa19.17■□□□□ 0.66
SSH1-207ENST00000547862 PPP1R7Q15435 360 aa19.17■□□□□ 0.66
SSH1-207ENST00000547862 SPINK14Q6IE38 97 aa19.17■□□□□ 0.66
SSH1-207ENST00000547862 LCTLQ6UWM7 567 aa19.17■□□□□ 0.66
SSH1-207ENST00000547862 BNC2Q6ZN30 1099 aaPredicted RBP19.17■□□□□ 0.66
SSH1-207ENST00000547862 LRRC8AQ8IWT6 810 aa19.17■□□□□ 0.66
SSH1-207ENST00000547862 PPIL6Q8IXY8 311 aa19.17■□□□□ 0.66
SSH1-207ENST00000547862 RASGEF1CQ8N431 466 aa19.17■□□□□ 0.66
SSH1-207ENST00000547862 ZNF808Q8N4W9 903 aaPredicted RBP19.17■□□□□ 0.66
SSH1-207ENST00000547862 MFSD9Q8NBP5 474 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms