RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 PRAMEF14Q5SWL7 426 aa12.24□□□□□ -0.45
SCAF11-209ENST00000547018 PRAMEF13Q5VWM6 474 aa12.24□□□□□ -0.45
SCAF11-209ENST00000547018 SLCO4C1Q6ZQN7 724 aa12.24□□□□□ -0.45
SCAF11-209ENST00000547018 HORMAD1Q86X24 394 aa12.24□□□□□ -0.45
SCAF11-209ENST00000547018 CSGALNACT1Q8TDX6 532 aa12.24□□□□□ -0.45
SCAF11-209ENST00000547018 RAB8BQ92930 207 aa12.24□□□□□ -0.45
SCAF11-209ENST00000547018 UCN3Q969E3 161 aa12.24□□□□□ -0.45
SCAF11-209ENST00000547018 RNF31Q96EP0 1072 aa12.24□□□□□ -0.45
SCAF11-209ENST00000547018 YIPF4Q9BSR8 244 aa12.24□□□□□ -0.45
SCAF11-209ENST00000547018 SFXN1Q9H9B4 322 aa12.24□□□□□ -0.45
SCAF11-209ENST00000547018 CLK4Q9HAZ1 481 aaKnown RBP12.24□□□□□ -0.45
SCAF11-209ENST00000547018 RHCGQ9UBD6 479 aa12.24□□□□□ -0.45
SCAF11-209ENST00000547018 WDR37Q9Y2I8 494 aa12.24□□□□□ -0.45
SCAF11-209ENST00000547018 ST14Q9Y5Y6 855 aa12.24□□□□□ -0.45
SCAF11-209ENST00000547018 A0A1W2PQU0 124 aa12.24□□□□□ -0.45
SCAF11-209ENST00000547018 HOXC11O43248 304 aaPredicted RBP12.24□□□□□ -0.45
SCAF11-209ENST00000547018 ERN1O75460 977 aaKnown RBP12.24□□□□□ -0.45
SCAF11-209ENST00000547018 ERAL1O75616 437 aaKnown RBP12.24□□□□□ -0.45
SCAF11-209ENST00000547018 AP2A2O94973 939 aa12.24□□□□□ -0.45
SCAF11-209ENST00000547018 APODP05090 189 aa12.24□□□□□ -0.45
SCAF11-209ENST00000547018 HOXB3P14651 431 aaPredicted RBP12.24□□□□□ -0.45
SCAF11-209ENST00000547018 PNLIPRP1P54315 467 aa12.24□□□□□ -0.45
SCAF11-209ENST00000547018 GAB1Q13480 694 aa12.24□□□□□ -0.45
SCAF11-209ENST00000547018 TMIGD1Q6UXZ0 262 aa12.24□□□□□ -0.45
SCAF11-209ENST00000547018 CCDC81Q6ZN84 652 aa12.24□□□□□ -0.45
SCAF11-209ENST00000547018 GPR65Q8IYL9 337 aa12.24□□□□□ -0.45
SCAF11-209ENST00000547018 VPS37AQ8NEZ2 397 aa12.24□□□□□ -0.45
SCAF11-209ENST00000547018 SLC5A11Q8WWX8 675 aa12.24□□□□□ -0.45
SCAF11-209ENST00000547018 UBE2FQ969M7 185 aa12.24□□□□□ -0.45
SCAF11-209ENST00000547018 KCNH6Q9H252 994 aa12.24□□□□□ -0.45
SCAF11-209ENST00000547018 WDR26Q9H7D7 661 aa12.24□□□□□ -0.45
SCAF11-209ENST00000547018 CTPS2Q9NRF8 586 aa12.24□□□□□ -0.45
SCAF11-209ENST00000547018 KIF17Q9P2E2 1029 aa12.24□□□□□ -0.45
SCAF11-209ENST00000547018 NEUROG3Q9Y4Z2 214 aa12.24□□□□□ -0.45
SCAF11-209ENST00000547018 SNX11Q9Y5W9 270 aa12.24□□□□□ -0.45
SCAF11-209ENST00000547018 SNRNP200O75643 2136 aaKnown RBP12.23□□□□□ -0.45
SCAF11-209ENST00000547018 TTC36A6NLP5 189 aa12.23□□□□□ -0.45
SCAF11-209ENST00000547018 XPNPEP2O43895 674 aa12.23□□□□□ -0.45
SCAF11-209ENST00000547018 IL3P08700 152 aa12.23□□□□□ -0.45
SCAF11-209ENST00000547018 THRBP10828 461 aa12.23□□□□□ -0.45
SCAF11-209ENST00000547018 AGXTP21549 392 aa12.23□□□□□ -0.45
SCAF11-209ENST00000547018 AK4P27144 223 aaPredicted RBP12.23□□□□□ -0.45
SCAF11-209ENST00000547018 SHMT2P34897 504 aa12.23□□□□□ -0.45
SCAF11-209ENST00000547018 HBA1P69905 142 aa12.23□□□□□ -0.45
SCAF11-209ENST00000547018 UBE3AQ05086 875 aa12.23□□□□□ -0.45
SCAF11-209ENST00000547018 DUOXA1Q1HG43 343 aa12.23□□□□□ -0.45
SCAF11-209ENST00000547018 Q6ZPB1 254 aaPredicted RBP12.23□□□□□ -0.45
SCAF11-209ENST00000547018 C17orf64Q86WR6 236 aa12.23□□□□□ -0.45
SCAF11-209ENST00000547018 CARM1Q86X55 608 aa12.23□□□□□ -0.45
SCAF11-209ENST00000547018 FAM129CQ86XR2 697 aa12.23□□□□□ -0.45
SCAF11-209ENST00000547018 PTRH1Q86Y79 214 aaKnown RBP12.23□□□□□ -0.45
SCAF11-209ENST00000547018 OR8J3Q8NGG0 315 aa12.23□□□□□ -0.45
SCAF11-209ENST00000547018 PPCDCQ96CD2 204 aa12.23□□□□□ -0.45
SCAF11-209ENST00000547018 TRMT61BQ9BVS5 477 aaKnown RBP12.23□□□□□ -0.45
SCAF11-209ENST00000547018 PRDM8Q9NQV8 689 aa12.23□□□□□ -0.45
SCAF11-209ENST00000547018 VNN3Q9NY84 501 aa12.23□□□□□ -0.45
SCAF11-209ENST00000547018 RAB23Q9ULC3 237 aa12.23□□□□□ -0.45
SCAF11-209ENST00000547018 PADI4Q9UM07 663 aa12.23□□□□□ -0.45
SCAF11-209ENST00000547018 CDC14AQ9UNH5 594 aa12.23□□□□□ -0.45
SCAF11-209ENST00000547018 RWDD3Q9Y3V2 267 aa12.23□□□□□ -0.45
SCAF11-209ENST00000547018 SAMHD1Q9Y3Z3 626 aaKnown RBP12.23□□□□□ -0.45
SCAF11-209ENST00000547018 NPC1O15118 1278 aa12.23□□□□□ -0.45
SCAF11-209ENST00000547018 RASAL1O95294 804 aa12.23□□□□□ -0.45
SCAF11-209ENST00000547018 C8orf89P0DMQ9 161 aa12.23□□□□□ -0.45
SCAF11-209ENST00000547018 DRD3P35462 400 aa12.23□□□□□ -0.45
SCAF11-209ENST00000547018 SLC19A1P41440 591 aa12.23□□□□□ -0.45
SCAF11-209ENST00000547018 CDK3Q00526 305 aa12.23□□□□□ -0.45
SCAF11-209ENST00000547018 SP140Q13342 867 aa12.23□□□□□ -0.45
SCAF11-209ENST00000547018 SPDYE7PQ495Y7 208 aa12.23□□□□□ -0.45
SCAF11-209ENST00000547018 CYBRD1Q53TN4 286 aa12.23□□□□□ -0.45
SCAF11-209ENST00000547018 CCNYL2Q5T2Q4 361 aa12.23□□□□□ -0.45
SCAF11-209ENST00000547018 LIPJQ5W064 366 aa12.23□□□□□ -0.45
SCAF11-209ENST00000547018 TMEM145Q8NBT3 493 aa12.23□□□□□ -0.45
SCAF11-209ENST00000547018 PHOSPHO2Q8TCD6 241 aa12.23□□□□□ -0.45
SCAF11-209ENST00000547018 FCRL4Q96PJ5 515 aa12.23□□□□□ -0.45
SCAF11-209ENST00000547018 CPPED1Q9BRF8 314 aaPredicted RBP12.23□□□□□ -0.45
SCAF11-209ENST00000547018 ZDHHC5Q9C0B5 715 aa12.23□□□□□ -0.45
SCAF11-209ENST00000547018 DKK3Q9UBP4 350 aa12.23□□□□□ -0.45
SCAF11-209ENST00000547018 H3BNH8 94 aa12.22□□□□□ -0.45
SCAF11-209ENST00000547018 FUCA1P04066 466 aa12.22□□□□□ -0.45
SCAF11-209ENST00000547018 C1GALT1C1LP0DN25 315 aa12.22□□□□□ -0.45
SCAF11-209ENST00000547018 EPHA2P29317 976 aa12.22□□□□□ -0.45
SCAF11-209ENST00000547018 HOXA9P31269 272 aa12.22□□□□□ -0.45
SCAF11-209ENST00000547018 CAPGP40121 348 aa12.22□□□□□ -0.45
SCAF11-209ENST00000547018 LSM3P62310 102 aaKnown RBP12.22□□□□□ -0.45
SCAF11-209ENST00000547018 KCNAB2Q13303 367 aa12.22□□□□□ -0.45
SCAF11-209ENST00000547018 TP53BP2Q13625 1128 aa12.22□□□□□ -0.45
SCAF11-209ENST00000547018 DAG1Q14118 895 aa12.22□□□□□ -0.45
SCAF11-209ENST00000547018 GANABQ14697 944 aaKnown RBP12.22□□□□□ -0.45
SCAF11-209ENST00000547018 PNCKQ6P2M8 343 aa12.22□□□□□ -0.45
SCAF11-209ENST00000547018 WDR20Q8TBZ3 569 aa12.22□□□□□ -0.45
SCAF11-209ENST00000547018 RAD51AP1Q96B01 352 aa12.22□□□□□ -0.45
SCAF11-209ENST00000547018 LRIG1Q96JA1 1093 aa12.22□□□□□ -0.45
SCAF11-209ENST00000547018 PDP1Q9P0J1 537 aaPredicted RBP12.22□□□□□ -0.45
SCAF11-209ENST00000547018 FBXO10Q9UK96 956 aa12.22□□□□□ -0.45
SCAF11-209ENST00000547018 A0A096LPI6 279 aa12.22□□□□□ -0.45
SCAF11-209ENST00000547018 TPST2O60704 377 aa12.22□□□□□ -0.45
SCAF11-209ENST00000547018 PTNP21246 168 aa12.22□□□□□ -0.45
SCAF11-209ENST00000547018 DCDC1P59894 354 aa12.22□□□□□ -0.45
SCAF11-209ENST00000547018 RAB8AP61006 207 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms