RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 A0A1W2PPV9 198 aa11.48□□□□□ -0.57
CCDC38-202ENST00000546386 ISM1B1AKI9 464 aa11.48□□□□□ -0.57
CCDC38-202ENST00000546386 BTN3A3O00478 584 aa11.48□□□□□ -0.57
CCDC38-202ENST00000546386 MBTPS2O43462 519 aa11.48□□□□□ -0.57
CCDC38-202ENST00000546386 SMNDC1O75940 238 aaKnown RBP eCLIP11.48□□□□□ -0.57
CCDC38-202ENST00000546386 STAMBPO95630 424 aa11.48□□□□□ -0.57
CCDC38-202ENST00000546386 C8orf89P0DMQ9 161 aa11.48□□□□□ -0.57
CCDC38-202ENST00000546386 PVRP15151 417 aa11.48□□□□□ -0.57
CCDC38-202ENST00000546386 ENGP17813 658 aa11.48□□□□□ -0.57
CCDC38-202ENST00000546386 YAP1P46937 504 aaKnown RBP11.48□□□□□ -0.57
CCDC38-202ENST00000546386 CLDN8P56748 225 aa11.48□□□□□ -0.57
CCDC38-202ENST00000546386 C2orf80Q0P641 193 aa11.48□□□□□ -0.57
CCDC38-202ENST00000546386 GAB1Q13480 694 aa11.48□□□□□ -0.57
CCDC38-202ENST00000546386 CCINQ13939 588 aa11.48□□□□□ -0.57
CCDC38-202ENST00000546386 COX20Q5RI15 118 aa11.48□□□□□ -0.57
CCDC38-202ENST00000546386 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.48□□□□□ -0.57
CCDC38-202ENST00000546386 NEK10Q6ZWH5 1172 aa11.48□□□□□ -0.57
CCDC38-202ENST00000546386 C17orf64Q86WR6 236 aa11.48□□□□□ -0.57
CCDC38-202ENST00000546386 ITCHQ96J02 903 aa11.48□□□□□ -0.57
CCDC38-202ENST00000546386 ZNF514Q96K75 400 aaPredicted RBP11.48□□□□□ -0.57
CCDC38-202ENST00000546386 PAIP1Q9H074 479 aaKnown RBP11.48□□□□□ -0.57
CCDC38-202ENST00000546386 UBE2ZQ9H832 354 aaPredicted RBP11.48□□□□□ -0.57
CCDC38-202ENST00000546386 SPATA6Q9NWH7 488 aaPredicted RBP11.48□□□□□ -0.57
CCDC38-202ENST00000546386 KLHL42Q9P2K6 505 aa11.48□□□□□ -0.57
CCDC38-202ENST00000546386 RNF103-CHMP3A0A140T963 221 aa11.47□□□□□ -0.57
CCDC38-202ENST00000546386 PRKD3O94806 890 aa11.47□□□□□ -0.57
CCDC38-202ENST00000546386 KLHL18O94889 574 aa11.47□□□□□ -0.57
CCDC38-202ENST00000546386 IL3P08700 152 aa11.47□□□□□ -0.57
CCDC38-202ENST00000546386 SLC19A1P41440 591 aa11.47□□□□□ -0.57
CCDC38-202ENST00000546386 SPIDRQ14159 915 aa11.47□□□□□ -0.57
CCDC38-202ENST00000546386 PLCL1Q15111 1095 aa11.47□□□□□ -0.57
CCDC38-202ENST00000546386 UAP1L1Q3KQV9 507 aa11.47□□□□□ -0.57
CCDC38-202ENST00000546386 ZNF765Q7L2R6 523 aa11.47□□□□□ -0.57
CCDC38-202ENST00000546386 VTCN1Q7Z7D3 282 aa11.47□□□□□ -0.57
CCDC38-202ENST00000546386 DCUN1D3Q8IWE4 304 aa11.47□□□□□ -0.57
CCDC38-202ENST00000546386 CAMK1GQ96NX5 476 aa11.47□□□□□ -0.57
CCDC38-202ENST00000546386 MENTQ9BUN1 341 aa11.47□□□□□ -0.57
CCDC38-202ENST00000546386 CHID1Q9BWS9 393 aa11.47□□□□□ -0.57
CCDC38-202ENST00000546386 TRIT1Q9H3H1 467 aaKnown RBP11.47□□□□□ -0.57
CCDC38-202ENST00000546386 DPEP2Q9H4A9 486 aa11.47□□□□□ -0.57
CCDC38-202ENST00000546386 DMRT3Q9NQL9 472 aa11.47□□□□□ -0.57
CCDC38-202ENST00000546386 STARD5Q9NSY2 213 aa11.47□□□□□ -0.57
CCDC38-202ENST00000546386 NCKAP1Q9Y2A7 1128 aa11.47□□□□□ -0.57
CCDC38-202ENST00000546386 MAP4K5Q9Y4K4 846 aa11.47□□□□□ -0.57
CCDC38-202ENST00000546386 DMXL1Q9Y485 3027 aa11.47□□□□□ -0.57
CCDC38-202ENST00000546386 UNC13CQ8NB66 2214 aa11.47□□□□□ -0.57
CCDC38-202ENST00000546386 TCRBV3S1A0A5B6 114 aa11.47□□□□□ -0.57
CCDC38-202ENST00000546386 ANKDD1BA6NHY2 528 aa11.47□□□□□ -0.57
CCDC38-202ENST00000546386 C4orf51C9J302 202 aa11.47□□□□□ -0.57
CCDC38-202ENST00000546386 EIF3FO00303 357 aaPredicted RBP11.47□□□□□ -0.57
CCDC38-202ENST00000546386 SH3BP5O60239 455 aa11.47□□□□□ -0.57
CCDC38-202ENST00000546386 NOBOXO60393 691 aa11.47□□□□□ -0.57
CCDC38-202ENST00000546386 SDC3O75056 442 aa11.47□□□□□ -0.57
CCDC38-202ENST00000546386 DNAJB6O75190 326 aa11.47□□□□□ -0.57
CCDC38-202ENST00000546386 PGM3O95394 542 aa11.47□□□□□ -0.57
CCDC38-202ENST00000546386 C6orf47O95873 294 aa11.47□□□□□ -0.57
CCDC38-202ENST00000546386 IL6P05231 212 aa11.47□□□□□ -0.57
CCDC38-202ENST00000546386 ATP6V1B1P15313 513 aa11.47□□□□□ -0.57
CCDC38-202ENST00000546386 TYRP1P17643 537 aa11.47□□□□□ -0.57
CCDC38-202ENST00000546386 PSMA4P25789 261 aaKnown RBP11.47□□□□□ -0.57
CCDC38-202ENST00000546386 WNT3P56703 355 aa11.47□□□□□ -0.57
CCDC38-202ENST00000546386 HBA1P69905 142 aa11.47□□□□□ -0.57
CCDC38-202ENST00000546386 PRKCQQ04759 706 aa11.47□□□□□ -0.57
CCDC38-202ENST00000546386 ZBTB49Q6ZSB9 765 aa11.47□□□□□ -0.57
CCDC38-202ENST00000546386 RASGRP3Q8IV61 690 aa11.47□□□□□ -0.57
CCDC38-202ENST00000546386 RIMKLAQ8IXN7 391 aa11.47□□□□□ -0.57
CCDC38-202ENST00000546386 ADGRG5Q8IZF4 528 aa11.47□□□□□ -0.57
CCDC38-202ENST00000546386 OFCC1Q8IZS5 231 aa11.47□□□□□ -0.57
CCDC38-202ENST00000546386 SLC22A18ASQ8N1D0 253 aa11.47□□□□□ -0.57
CCDC38-202ENST00000546386 MAGEE2Q8TD90 523 aaPredicted RBP11.47□□□□□ -0.57
CCDC38-202ENST00000546386 FAM162AQ96A26 154 aa11.47□□□□□ -0.57
CCDC38-202ENST00000546386 FAM120BQ96EK7 910 aaKnown RBP11.47□□□□□ -0.57
CCDC38-202ENST00000546386 GBP5Q96PP8 586 aa11.47□□□□□ -0.57
CCDC38-202ENST00000546386 SGPP1Q9BX95 441 aa11.47□□□□□ -0.57
CCDC38-202ENST00000546386 LMAN1LQ9HAT1 526 aa11.47□□□□□ -0.57
CCDC38-202ENST00000546386 C17orf113A0A1B0GUU1 675 aa11.46□□□□□ -0.57
CCDC38-202ENST00000546386 DPPA5A6NC42 116 aa11.46□□□□□ -0.57
CCDC38-202ENST00000546386 H0YIV9 168 aa11.46□□□□□ -0.57
CCDC38-202ENST00000546386 PLPP1O14494 284 aa11.46□□□□□ -0.57
CCDC38-202ENST00000546386 EIF2S1P05198 315 aaKnown RBP11.46□□□□□ -0.57
CCDC38-202ENST00000546386 MYF5P13349 255 aa11.46□□□□□ -0.57
CCDC38-202ENST00000546386 ZNF23P17027 643 aa11.46□□□□□ -0.57
CCDC38-202ENST00000546386 FUT4P22083 530 aa11.46□□□□□ -0.57
CCDC38-202ENST00000546386 SOAT1P35610 550 aa11.46□□□□□ -0.57
CCDC38-202ENST00000546386 IL1RL1Q01638 556 aa11.46□□□□□ -0.57
CCDC38-202ENST00000546386 MPEG1Q2M385 716 aa11.46□□□□□ -0.57
CCDC38-202ENST00000546386 RNF220Q5VTB9 566 aa11.46□□□□□ -0.57
CCDC38-202ENST00000546386 EPHX4Q8IUS5 362 aa11.46□□□□□ -0.57
CCDC38-202ENST00000546386 TMEM132CQ8N3T6 1108 aa11.46□□□□□ -0.57
CCDC38-202ENST00000546386 EXOSC8Q96B26 276 aaKnown RBP11.46□□□□□ -0.57
CCDC38-202ENST00000546386 TPD52L3Q96J77 140 aa11.46□□□□□ -0.57
CCDC38-202ENST00000546386 NSMCE2Q96MF7 247 aa11.46□□□□□ -0.57
CCDC38-202ENST00000546386 CCT7Q99832 543 aa11.46□□□□□ -0.57
CCDC38-202ENST00000546386 DPH7Q9BTV6 452 aa11.46□□□□□ -0.57
CCDC38-202ENST00000546386 DUSP26Q9BV47 211 aa11.46□□□□□ -0.57
CCDC38-202ENST00000546386 EPHX3Q9H6B9 360 aa11.46□□□□□ -0.57
CCDC38-202ENST00000546386 AASDHPPTQ9NRN7 309 aa11.46□□□□□ -0.57
CCDC38-202ENST00000546386 TEX10Q9NXF1 929 aaPredicted RBP11.46□□□□□ -0.57
CCDC38-202ENST00000546386 ACTR3BQ9P1U1 418 aa11.46□□□□□ -0.57
CCDC38-202ENST00000546386 ZNF624Q9P2J8 865 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms