RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 KRTAP13-3Q3SY46 172 aa3.72□□□□□ -1.81
SNHG1-224ENST00000545688 GPR33Q49SQ1 333 aa3.72□□□□□ -1.81
SNHG1-224ENST00000545688 SEL1L3Q68CR1 1132 aa3.72□□□□□ -1.81
SNHG1-224ENST00000545688 ZER1Q7Z7L7 766 aa3.72□□□□□ -1.81
SNHG1-224ENST00000545688 TAGAPQ8N103 731 aa3.72□□□□□ -1.81
SNHG1-224ENST00000545688 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.72□□□□□ -1.81
SNHG1-224ENST00000545688 APPL2Q8NEU8 664 aa3.72□□□□□ -1.81
SNHG1-224ENST00000545688 OR7A2PQ8NGA2 310 aa3.72□□□□□ -1.81
SNHG1-224ENST00000545688 OR4K1Q8NGD4 311 aa3.72□□□□□ -1.81
SNHG1-224ENST00000545688 CFAP61Q8NHU2 1237 aa3.72□□□□□ -1.81
SNHG1-224ENST00000545688 PRPF31Q8WWY3 499 aaKnown RBP3.72□□□□□ -1.81
SNHG1-224ENST00000545688 SKA1Q96BD8 255 aa3.72□□□□□ -1.81
SNHG1-224ENST00000545688 NSUN4Q96CB9 384 aaKnown RBP3.72□□□□□ -1.81
SNHG1-224ENST00000545688 TMCO6Q96DC7 493 aa3.72□□□□□ -1.81
SNHG1-224ENST00000545688 FAM71F1Q96KD3 344 aaPredicted RBP3.72□□□□□ -1.81
SNHG1-224ENST00000545688 C2orf48Q96LS8 159 aa3.72□□□□□ -1.81
SNHG1-224ENST00000545688 MAP3K3Q99759 626 aa3.72□□□□□ -1.81
SNHG1-224ENST00000545688 SDF4Q9BRK5 362 aa3.72□□□□□ -1.81
SNHG1-224ENST00000545688 ZMYND12Q9H0C1 365 aa3.72□□□□□ -1.81
SNHG1-224ENST00000545688 Q9H8V8 135 aa3.72□□□□□ -1.81
SNHG1-224ENST00000545688 BLOC1S4Q9NUP1 217 aa3.72□□□□□ -1.81
SNHG1-224ENST00000545688 PRMT7Q9NVM4 692 aaPredicted RBP3.72□□□□□ -1.81
SNHG1-224ENST00000545688 GDE1Q9NZC3 331 aa3.72□□□□□ -1.81
SNHG1-224ENST00000545688 E9PCH4 1651 aa3.71□□□□□ -1.81
SNHG1-224ENST00000545688 CAMTA1Q9Y6Y1 1673 aa3.71□□□□□ -1.81
SNHG1-224ENST00000545688 NAIPQ13075 1403 aa3.71□□□□□ -1.82
SNHG1-224ENST00000545688 TNS3Q68CZ2 1445 aa3.71□□□□□ -1.82
SNHG1-224ENST00000545688 NRAPQ86VF7 1730 aa3.71□□□□□ -1.82
SNHG1-224ENST00000545688 A0A1W2PPQ1 181 aa3.71□□□□□ -1.82
SNHG1-224ENST00000545688 KRT33AO76009 404 aa3.71□□□□□ -1.82
SNHG1-224ENST00000545688 CAPGP40121 348 aa3.71□□□□□ -1.82
SNHG1-224ENST00000545688 VAMP7P51809 220 aa3.71□□□□□ -1.82
SNHG1-224ENST00000545688 ZNF75DP51815 510 aa3.71□□□□□ -1.82
SNHG1-224ENST00000545688 BAATQ14032 418 aaPredicted RBP3.71□□□□□ -1.82
SNHG1-224ENST00000545688 VEZF1Q14119 521 aa3.71□□□□□ -1.82
SNHG1-224ENST00000545688 PTPN14Q15678 1187 aa3.71□□□□□ -1.82
SNHG1-224ENST00000545688 FAM189A2Q15884 450 aa3.71□□□□□ -1.82
SNHG1-224ENST00000545688 C15orf32Q32M92 178 aa3.71□□□□□ -1.82
SNHG1-224ENST00000545688 PRR27Q6MZM9 219 aa3.71□□□□□ -1.82
SNHG1-224ENST00000545688 CHMP1BQ7LBR1 199 aa3.71□□□□□ -1.82
SNHG1-224ENST00000545688 C9orf43Q8TAL5 461 aaPredicted RBP3.71□□□□□ -1.82
SNHG1-224ENST00000545688 PTERQ96BW5 349 aa3.71□□□□□ -1.82
SNHG1-224ENST00000545688 MRPL1Q9BYD6 325 aaKnown RBP3.71□□□□□ -1.82
SNHG1-224ENST00000545688 THAP10Q9P2Z0 257 aaPredicted RBP3.71□□□□□ -1.82
SNHG1-224ENST00000545688 RNF150Q9ULK6 438 aa3.71□□□□□ -1.82
SNHG1-224ENST00000545688 ABCC11Q96J66 1382 aa3.71□□□□□ -1.82
SNHG1-224ENST00000545688 NUP188Q5SRE5 1749 aa3.7□□□□□ -1.82
SNHG1-224ENST00000545688 G3V2L1 256 aa3.7□□□□□ -1.82
SNHG1-224ENST00000545688 ERAL1O75616 437 aaKnown RBP3.7□□□□□ -1.82
SNHG1-224ENST00000545688 POP4O95707 220 aaKnown RBP3.7□□□□□ -1.82
SNHG1-224ENST00000545688 ATP1B1P05026 303 aa3.7□□□□□ -1.82
SNHG1-224ENST00000545688 RAB40ALP0C0E4 278 aa3.7□□□□□ -1.82
SNHG1-224ENST00000545688 LINGO3P0C6S8 592 aa3.7□□□□□ -1.82
SNHG1-224ENST00000545688 IRF2P14316 349 aa3.7□□□□□ -1.82
SNHG1-224ENST00000545688 BCL3P20749 454 aa3.7□□□□□ -1.82
SNHG1-224ENST00000545688 OR3A2P47893 321 aa3.7□□□□□ -1.82
SNHG1-224ENST00000545688 ALDH3A2P51648 485 aa3.7□□□□□ -1.82
SNHG1-224ENST00000545688 CLCN4P51793 760 aa3.7□□□□□ -1.82
SNHG1-224ENST00000545688 FAM198BQ6UWH4 519 aa3.7□□□□□ -1.82
SNHG1-224ENST00000545688 LCLAT1Q6UWP7 414 aa3.7□□□□□ -1.82
SNHG1-224ENST00000545688 ZNF841Q6ZN19 808 aa3.7□□□□□ -1.82
SNHG1-224ENST00000545688 SLC25A42Q86VD7 318 aa3.7□□□□□ -1.82
SNHG1-224ENST00000545688 FAM131BQ86XD5 332 aa3.7□□□□□ -1.82
SNHG1-224ENST00000545688 NDUFAF2Q8N183 169 aa3.7□□□□□ -1.82
SNHG1-224ENST00000545688 OR5T2Q8NGG2 359 aa3.7□□□□□ -1.82
SNHG1-224ENST00000545688 NPRL2Q8WTW4 380 aa3.7□□□□□ -1.82
SNHG1-224ENST00000545688 TOMM40LQ969M1 308 aa3.7□□□□□ -1.82
SNHG1-224ENST00000545688 RSRC1Q96IZ7 334 aaKnown RBP3.7□□□□□ -1.82
SNHG1-224ENST00000545688 PARLQ9H300 379 aa3.7□□□□□ -1.82
SNHG1-224ENST00000545688 TUBB1Q9H4B7 451 aa3.7□□□□□ -1.82
SNHG1-224ENST00000545688 HEXA-AS1Q9H8Q6 139 aa3.7□□□□□ -1.82
SNHG1-224ENST00000545688 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.7□□□□□ -1.82
SNHG1-224ENST00000545688 CHKBQ9Y259 395 aa3.7□□□□□ -1.82
SNHG1-224ENST00000545688 ARHGEF10O15013 1369 aa3.7□□□□□ -1.82
SNHG1-224ENST00000545688 NRXN1Q9ULB1 1477 aa3.7□□□□□ -1.82
SNHG1-224ENST00000545688 ADGRB2O60241 1585 aa3.7□□□□□ -1.82
SNHG1-224ENST00000545688 CASZ1Q86V15 1759 aa3.7□□□□□ -1.82
SNHG1-224ENST00000545688 RALGAPA1Q6GYQ0 2036 aa3.7□□□□□ -1.82
SNHG1-224ENST00000545688 VPS8Q8N3P4 1428 aa3.7□□□□□ -1.82
SNHG1-224ENST00000545688 RPGRIP1LQ68CZ1 1315 aa3.7□□□□□ -1.82
SNHG1-224ENST00000545688 PLCH1Q4KWH8 1693 aa3.69□□□□□ -1.82
SNHG1-224ENST00000545688 ROCK1Q13464 1354 aa3.69□□□□□ -1.82
SNHG1-224ENST00000545688 PLEKHH1Q9ULM0 1364 aa3.69□□□□□ -1.82
SNHG1-224ENST00000545688 IGHV4-30-2A0A087WSY4 118 aa3.69□□□□□ -1.82
SNHG1-224ENST00000545688 GLOD5A6NK44 160 aa3.69□□□□□ -1.82
SNHG1-224ENST00000545688 SHISA9B4DS77 424 aa3.69□□□□□ -1.82
SNHG1-224ENST00000545688 NPIPB9F8W1W9 429 aa3.69□□□□□ -1.82
SNHG1-224ENST00000545688 SNAP91O60641 907 aa3.69□□□□□ -1.82
SNHG1-224ENST00000545688 PIK3R1P27986 724 aa3.69□□□□□ -1.82
SNHG1-224ENST00000545688 EIF2DP41214 584 aaKnown RBP3.69□□□□□ -1.82
SNHG1-224ENST00000545688 FCHO2Q0JRZ9 810 aa3.69□□□□□ -1.82
SNHG1-224ENST00000545688 TRIM29Q14134 588 aa3.69□□□□□ -1.82
SNHG1-224ENST00000545688 RILPL1Q5EBL4 403 aa3.69□□□□□ -1.82
SNHG1-224ENST00000545688 GARNL3Q5VVW2 1013 aa3.69□□□□□ -1.82
SNHG1-224ENST00000545688 OR4A47Q6IF82 309 aa3.69□□□□□ -1.82
SNHG1-224ENST00000545688 MARCH9Q86YJ5 346 aa3.69□□□□□ -1.82
SNHG1-224ENST00000545688 JAKMIP2Q96AA8 810 aa3.69□□□□□ -1.82
SNHG1-224ENST00000545688 ZNF830Q96NB3 372 aaPredicted RBP3.69□□□□□ -1.82
SNHG1-224ENST00000545688 NAP1L4Q99733 375 aaKnown RBP3.69□□□□□ -1.82
SNHG1-224ENST00000545688 MTHFD2LQ9H903 347 aaPredicted RBP3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms