RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, human

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-223	ENST00000545440	GALNT7	Q86SF2	657 aa		7.35	□□□□□ -1.23
SNHG1-223	ENST00000545440	RAB43	Q86YS6	212 aa		7.35	□□□□□ -1.23
SNHG1-223	ENST00000545440	FBXO15	Q8NCQ5	510 aa	Predicted RBP	7.35	□□□□□ -1.23
SNHG1-223	ENST00000545440	OR9A1P	Q8NGU1	263 aa		7.35	□□□□□ -1.23
SNHG1-223	ENST00000545440	CD200R1	Q8TD46	325 aa		7.35	□□□□□ -1.23
SNHG1-223	ENST00000545440	ZUFSP	Q96AP4	578 aa		7.35	□□□□□ -1.23
SNHG1-223	ENST00000545440	FKBP10	Q96AY3	582 aa		7.35	□□□□□ -1.23
SNHG1-223	ENST00000545440	CAPZA3	Q96KX2	299 aa		7.35	□□□□□ -1.23
SNHG1-223	ENST00000545440	ZNF285	Q96NJ3	590 aa		7.35	□□□□□ -1.23
SNHG1-223	ENST00000545440	EBNA1BP2	Q99848	306 aa	Known RBP	7.35	□□□□□ -1.23
SNHG1-223	ENST00000545440	NDC1	Q9BTX1	674 aa		7.35	□□□□□ -1.23
SNHG1-223	ENST00000545440	SPRTN	Q9H040	489 aa	Predicted RBP	7.35	□□□□□ -1.23
SNHG1-223	ENST00000545440	FBXO6	Q9NRD1	293 aa	Predicted RBP	7.35	□□□□□ -1.23
SNHG1-223	ENST00000545440	TXLNG	Q9NUQ3	528 aa		7.35	□□□□□ -1.23
SNHG1-223	ENST00000545440	IRAK4	Q9NWZ3	460 aa		7.35	□□□□□ -1.23
SNHG1-223	ENST00000545440	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	7.35	□□□□□ -1.23
SNHG1-223	ENST00000545440	ANKMY1	Q9P2S6	941 aa		7.35	□□□□□ -1.23
SNHG1-223	ENST00000545440	RNF14	Q9UBS8	474 aa		7.35	□□□□□ -1.23
SNHG1-223	ENST00000545440	FBXO5	Q9UKT4	447 aa		7.35	□□□□□ -1.23
SNHG1-223	ENST00000545440	TP53TG5	Q9Y2B4	290 aa		7.35	□□□□□ -1.23
SNHG1-223	ENST00000545440	PCDHGA9	Q9Y5G4	932 aa	Known RBP	7.35	□□□□□ -1.23
SNHG1-223	ENST00000545440	SPEN	Q96T58	3664 aa	Known RBP	7.35	□□□□□ -1.23
SNHG1-223	ENST00000545440	OR2A25	A4D2G3	310 aa		7.34	□□□□□ -1.23
SNHG1-223	ENST00000545440	FITM1	A5D6W6	292 aa		7.34	□□□□□ -1.23
SNHG1-223	ENST00000545440	KRT87P	A6NCN2	255 aa		7.34	□□□□□ -1.23
SNHG1-223	ENST00000545440	NDC80	O14777	642 aa		7.34	□□□□□ -1.23
SNHG1-223	ENST00000545440	VPS26A	O75436	327 aa		7.34	□□□□□ -1.23
SNHG1-223	ENST00000545440	KLF7	O75840	302 aa	Predicted RBP	7.34	□□□□□ -1.23
SNHG1-223	ENST00000545440	DNAJB5	O75953	348 aa		7.34	□□□□□ -1.23
SNHG1-223	ENST00000545440	SEC31A	O94979	1220 aa	Known RBP	7.34	□□□□□ -1.23
SNHG1-223	ENST00000545440	CCNDBP1	O95273	360 aa		7.34	□□□□□ -1.23
SNHG1-223	ENST00000545440	ONECUT2	O95948	504 aa		7.34	□□□□□ -1.23
SNHG1-223	ENST00000545440	MPC1L	P0DKB6	136 aa		7.34	□□□□□ -1.23
SNHG1-223	ENST00000545440	PSMB5	P28074	263 aa		7.34	□□□□□ -1.23
SNHG1-223	ENST00000545440	CMPK1	P30085	196 aa		7.34	□□□□□ -1.23
SNHG1-223	ENST00000545440	CASR	P41180	1078 aa		7.34	□□□□□ -1.23
SNHG1-223	ENST00000545440	FOLR3	P41439	243 aa		7.34	□□□□□ -1.23
SNHG1-223	ENST00000545440	GRIA3	P42263	894 aa		7.34	□□□□□ -1.23
SNHG1-223	ENST00000545440	DCD	P81605	110 aa	Known RBP	7.34	□□□□□ -1.23
SNHG1-223	ENST00000545440	NFKB2	Q00653	900 aa		7.34	□□□□□ -1.23
SNHG1-223	ENST00000545440	DR1	Q01658	176 aa		7.34	□□□□□ -1.23
SNHG1-223	ENST00000545440	SP140	Q13342	867 aa		7.34	□□□□□ -1.23
SNHG1-223	ENST00000545440	CUL1	Q13616	776 aa		7.34	□□□□□ -1.23
SNHG1-223	ENST00000545440	GRM7	Q14831	915 aa		7.34	□□□□□ -1.23
SNHG1-223	ENST00000545440	CPZ	Q66K79	652 aa		7.34	□□□□□ -1.23
SNHG1-223	ENST00000545440	UGT3A1	Q6NUS8	523 aa		7.34	□□□□□ -1.23
SNHG1-223	ENST00000545440	ZNF549	Q6P9A3	640 aa		7.34	□□□□□ -1.23
SNHG1-223	ENST00000545440	FIGLA	Q6QHK4	219 aa		7.34	□□□□□ -1.23
SNHG1-223	ENST00000545440	CYP2R1	Q6VVX0	501 aa		7.34	□□□□□ -1.23
SNHG1-223	ENST00000545440	PDIK1L	Q8N165	341 aa		7.34	□□□□□ -1.23
SNHG1-223	ENST00000545440	C2orf73	Q8N5S3	287 aa	Predicted RBP	7.34	□□□□□ -1.23
SNHG1-223	ENST00000545440	TTC29	Q8NA56	475 aa	Predicted RBP	7.34	□□□□□ -1.23
SNHG1-223	ENST00000545440	OR2A1	Q8NGT9	310 aa		7.34	□□□□□ -1.23
SNHG1-223	ENST00000545440	OR2Y1	Q8NGV0	311 aa		7.34	□□□□□ -1.23
SNHG1-223	ENST00000545440	SMPDL3A	Q92484	453 aa		7.34	□□□□□ -1.23
SNHG1-223	ENST00000545440	INPP5D	Q92835	1189 aa		7.34	□□□□□ -1.23
SNHG1-223	ENST00000545440	LRRC39	Q96DD0	335 aa		7.34	□□□□□ -1.23
SNHG1-223	ENST00000545440	CERS2	Q96G23	380 aa		7.34	□□□□□ -1.23
SNHG1-223	ENST00000545440	SNF8	Q96H20	258 aa		7.34	□□□□□ -1.23
SNHG1-223	ENST00000545440	IP6K3	Q96PC2	410 aa		7.34	□□□□□ -1.23
SNHG1-223	ENST00000545440	GPR21	Q99679	349 aa		7.34	□□□□□ -1.23
SNHG1-223	ENST00000545440	SELENOS	Q9BQE4	189 aa		7.34	□□□□□ -1.23
SNHG1-223	ENST00000545440	ZNF71	Q9NQZ8	489 aa	Predicted RBP	7.34	□□□□□ -1.23
SNHG1-223	ENST00000545440	ACSS2	Q9NR19	701 aa		7.34	□□□□□ -1.23
SNHG1-223	ENST00000545440	GALP	Q9UBC7	116 aa		7.34	□□□□□ -1.23
SNHG1-223	ENST00000545440	DHCR7	Q9UBM7	475 aa	Known RBP	7.34	□□□□□ -1.23
SNHG1-223	ENST00000545440	NDOR1	Q9UHB4	597 aa		7.34	□□□□□ -1.23
SNHG1-223	ENST00000545440	TLK1	Q9UKI8	766 aa		7.34	□□□□□ -1.23
SNHG1-223	ENST00000545440	CORO1C	Q9ULV4	474 aa	Predicted RBP	7.34	□□□□□ -1.23
SNHG1-223	ENST00000545440	PYCARD	Q9ULZ3	195 aa		7.34	□□□□□ -1.23
SNHG1-223	ENST00000545440	PLAA	Q9Y263	795 aa		7.34	□□□□□ -1.23
SNHG1-223	ENST00000545440	KLHL20	Q9Y2M5	609 aa		7.34	□□□□□ -1.23
SNHG1-223	ENST00000545440	DHRS7	Q9Y394	339 aa		7.34	□□□□□ -1.23
SNHG1-223	ENST00000545440	ESPL1	Q14674	2120 aa		7.34	□□□□□ -1.23
SNHG1-223	ENST00000545440	RP1L1	Q8IWN7	2480 aa	Predicted RBP	7.34	□□□□□ -1.24
SNHG1-223	ENST00000545440	TENM4	Q6N022	2769 aa		7.33	□□□□□ -1.24
SNHG1-223	ENST00000545440	PTPN13	Q12923	2485 aa		7.33	□□□□□ -1.24
SNHG1-223	ENST00000545440	ARGFX	A6NJG6	315 aa		7.33	□□□□□ -1.24
SNHG1-223	ENST00000545440	GFY	I3L273	518 aa		7.33	□□□□□ -1.24
SNHG1-223	ENST00000545440	DSCR3	O14972	297 aa		7.33	□□□□□ -1.24
SNHG1-223	ENST00000545440	SRPX2	O60687	465 aa	Predicted RBP	7.33	□□□□□ -1.24
SNHG1-223	ENST00000545440	CTSV	O60911	334 aa		7.33	□□□□□ -1.24
SNHG1-223	ENST00000545440	BANF1	O75531	89 aa		7.33	□□□□□ -1.24
SNHG1-223	ENST00000545440	CEACAM4	O75871	244 aa		7.33	□□□□□ -1.24
SNHG1-223	ENST00000545440	HAUS5	O94927	633 aa		7.33	□□□□□ -1.24
SNHG1-223	ENST00000545440	ZNF205	O95201	554 aa		7.33	□□□□□ -1.24
SNHG1-223	ENST00000545440	SLC16A8	O95907	504 aa		7.33	□□□□□ -1.24
SNHG1-223	ENST00000545440	F7	P08709	466 aa	Predicted RBP	7.33	□□□□□ -1.24
SNHG1-223	ENST00000545440	ERVK-10	P10266	1014 aa		7.33	□□□□□ -1.24
SNHG1-223	ENST00000545440	PIM1	P11309	404 aa	Predicted RBP	7.33	□□□□□ -1.24
SNHG1-223	ENST00000545440	ITGAX	P20702	1163 aa		7.33	□□□□□ -1.24
SNHG1-223	ENST00000545440	RPA3	P35244	121 aa	Predicted RBP	7.33	□□□□□ -1.24
SNHG1-223	ENST00000545440	SKIV2L2	P42285	1042 aa	Known RBP	7.33	□□□□□ -1.24
SNHG1-223	ENST00000545440	PAFAH1B1	P43034	410 aa		7.33	□□□□□ -1.24
SNHG1-223	ENST00000545440	RGS4	P49798	205 aa		7.33	□□□□□ -1.24
SNHG1-223	ENST00000545440	CSRP3	P50461	194 aa		7.33	□□□□□ -1.24
SNHG1-223	ENST00000545440	PGD	P52209	483 aa		7.33	□□□□□ -1.24
SNHG1-223	ENST00000545440	PNLIPRP1	P54315	467 aa		7.33	□□□□□ -1.24
SNHG1-223	ENST00000545440	RRAD	P55042	308 aa		7.33	□□□□□ -1.24
SNHG1-223	ENST00000545440	RELA	Q04206	551 aa		7.33	□□□□□ -1.24

Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms