RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 PCM1Q15154 2024 aa14.93□□□□□ -0.02
CCDC78-216ENST00000544996 SEC16AO15027 2179 aa14.92□□□□□ -0.02
CCDC78-216ENST00000544996 CCDC189A1A4V9 331 aa14.92□□□□□ -0.02
CCDC78-216ENST00000544996 K7EM74 188 aa14.92□□□□□ -0.02
CCDC78-216ENST00000544996 STK16O75716 305 aa14.92□□□□□ -0.02
CCDC78-216ENST00000544996 C2P06681 752 aa14.92□□□□□ -0.02
CCDC78-216ENST00000544996 RHOXF2BP0C7M4 288 aa14.92□□□□□ -0.02
CCDC78-216ENST00000544996 TYK2P29597 1187 aa14.92□□□□□ -0.02
CCDC78-216ENST00000544996 GGT5P36269 586 aa14.92□□□□□ -0.02
CCDC78-216ENST00000544996 SCTRP47872 440 aa14.92□□□□□ -0.02
CCDC78-216ENST00000544996 SERPINB8P50452 374 aa14.92□□□□□ -0.02
CCDC78-216ENST00000544996 EMP2P54851 167 aa14.92□□□□□ -0.02
CCDC78-216ENST00000544996 CDC16Q13042 620 aa14.92□□□□□ -0.02
CCDC78-216ENST00000544996 AIMP2Q13155 320 aaKnown RBP14.92□□□□□ -0.02
CCDC78-216ENST00000544996 HERC3Q15034 1050 aa14.92□□□□□ -0.02
CCDC78-216ENST00000544996 RBBP5Q15291 538 aaKnown RBP14.92□□□□□ -0.02
CCDC78-216ENST00000544996 C18orf21Q32NC0 220 aaPredicted RBP14.92□□□□□ -0.02
CCDC78-216ENST00000544996 IRAK1BP1Q5VVH5 260 aa14.92□□□□□ -0.02
CCDC78-216ENST00000544996 ISCA2Q86U28 154 aa14.92□□□□□ -0.02
CCDC78-216ENST00000544996 TMEM151BQ8IW70 566 aa14.92□□□□□ -0.02
CCDC78-216ENST00000544996 GALNT16Q8N428 558 aa14.92□□□□□ -0.02
CCDC78-216ENST00000544996 KCT2Q8NC54 265 aa14.92□□□□□ -0.02
CCDC78-216ENST00000544996 PDPRQ8NCN5 879 aa14.92□□□□□ -0.02
CCDC78-216ENST00000544996 ZNF740Q8NDX6 193 aa14.92□□□□□ -0.02
CCDC78-216ENST00000544996 TRPV3Q8NET8 790 aa14.92□□□□□ -0.02
CCDC78-216ENST00000544996 FDCSPQ8NFU4 85 aa14.92□□□□□ -0.02
CCDC78-216ENST00000544996 ZCCHC10Q8TBK6 192 aa14.92□□□□□ -0.02
CCDC78-216ENST00000544996 SLC44A1Q8WWI5 657 aa14.92□□□□□ -0.02
CCDC78-216ENST00000544996 EXT2Q93063 718 aa14.92□□□□□ -0.02
CCDC78-216ENST00000544996 RHOXF2Q9BQY4 288 aa14.92□□□□□ -0.02
CCDC78-216ENST00000544996 MLXIPLQ9NP71 852 aa14.92□□□□□ -0.02
CCDC78-216ENST00000544996 SNX15Q9NRS6 342 aa14.92□□□□□ -0.02
CCDC78-216ENST00000544996 IGSF5Q9NSI5 407 aa14.92□□□□□ -0.02
CCDC78-216ENST00000544996 DNAJC11Q9NVH1 559 aa14.92□□□□□ -0.02
CCDC78-216ENST00000544996 GPRC5BQ9NZH0 403 aa14.92□□□□□ -0.02
CCDC78-216ENST00000544996 FBXL4Q9UKA2 621 aa14.92□□□□□ -0.02
CCDC78-216ENST00000544996 MRPS2Q9Y399 296 aaKnown RBP14.92□□□□□ -0.02
CCDC78-216ENST00000544996 ZNF451Q9Y4E5 1061 aa14.92□□□□□ -0.02
CCDC78-216ENST00000544996 HS3ST3B1Q9Y662 390 aa14.92□□□□□ -0.02
CCDC78-216ENST00000544996 A0A087WUV0 522 aaPredicted RBP14.91□□□□□ -0.02
CCDC78-216ENST00000544996 A0A096LPK6 155 aa14.91□□□□□ -0.02
CCDC78-216ENST00000544996 URADA6NGE7 173 aa14.91□□□□□ -0.02
CCDC78-216ENST00000544996 SYCE1LA8MT33 242 aa14.91□□□□□ -0.02
CCDC78-216ENST00000544996 IDSB3KWA1 339 aa14.91□□□□□ -0.02
CCDC78-216ENST00000544996 SUPT3HB4E1H0 165 aa14.91□□□□□ -0.02
CCDC78-216ENST00000544996 J3QKU1 62 aa14.91□□□□□ -0.02
CCDC78-216ENST00000544996 SOCS6O14544 535 aa14.91□□□□□ -0.02
CCDC78-216ENST00000544996 PCDH17O14917 1159 aa14.91□□□□□ -0.02
CCDC78-216ENST00000544996 CLGNO14967 610 aa14.91□□□□□ -0.02
CCDC78-216ENST00000544996 TAPBPO15533 448 aa14.91□□□□□ -0.02
CCDC78-216ENST00000544996 KERAO60938 352 aa14.91□□□□□ -0.02
CCDC78-216ENST00000544996 SUPT3HO75486 399 aa14.91□□□□□ -0.02
CCDC78-216ENST00000544996 KRT38O76015 456 aa14.91□□□□□ -0.02
CCDC78-216ENST00000544996 ALPPP05187 535 aa14.91□□□□□ -0.02
CCDC78-216ENST00000544996 HEXBP07686 556 aa14.91□□□□□ -0.02
CCDC78-216ENST00000544996 C1GALT1C1LP0DN25 315 aa14.91□□□□□ -0.02
CCDC78-216ENST00000544996 ACPPP15309 386 aa14.91□□□□□ -0.02
CCDC78-216ENST00000544996 IL1RNP18510 177 aa14.91□□□□□ -0.02
CCDC78-216ENST00000544996 NR1D1P20393 614 aa14.91□□□□□ -0.02
CCDC78-216ENST00000544996 VARSP26640 1264 aaKnown RBP14.91□□□□□ -0.02
CCDC78-216ENST00000544996 MSH2P43246 934 aa14.91□□□□□ -0.02
CCDC78-216ENST00000544996 HSPA7P48741 367 aa14.91□□□□□ -0.02
CCDC78-216ENST00000544996 SERPINB9P50453 376 aa14.91□□□□□ -0.02
CCDC78-216ENST00000544996 MAT1AQ00266 395 aaKnown RBP14.91□□□□□ -0.02
CCDC78-216ENST00000544996 REEP5Q00765 189 aa14.91□□□□□ -0.02
CCDC78-216ENST00000544996 TUBB8Q3ZCM7 444 aa14.91□□□□□ -0.02
CCDC78-216ENST00000544996 ATG9BQ674R7 924 aa14.91□□□□□ -0.02
CCDC78-216ENST00000544996 NIPAL1Q6NVV3 410 aa14.91□□□□□ -0.02
CCDC78-216ENST00000544996 KLC3Q6P597 504 aa14.91□□□□□ -0.02
CCDC78-216ENST00000544996 KIRREL2Q6UWL6 708 aa14.91□□□□□ -0.02
CCDC78-216ENST00000544996 LAPTM4BQ86VI4 370 aa14.91□□□□□ -0.02
CCDC78-216ENST00000544996 HPS6Q86YV9 775 aa14.91□□□□□ -0.02
CCDC78-216ENST00000544996 KRT78Q8N1N4 520 aa14.91□□□□□ -0.02
CCDC78-216ENST00000544996 SNX31Q8N9S9 440 aa14.91□□□□□ -0.02
CCDC78-216ENST00000544996 NXNL1Q96CM4 212 aa14.91□□□□□ -0.02
CCDC78-216ENST00000544996 PAFAH2Q99487 392 aa14.91□□□□□ -0.02
CCDC78-216ENST00000544996 NUDT4Q9NZJ9 180 aa14.91□□□□□ -0.02
CCDC78-216ENST00000544996 PTBP2Q9UKA9 531 aaKnown RBP14.91□□□□□ -0.02
CCDC78-216ENST00000544996 HMX2A2RU54 273 aa14.9□□□□□ -0.02
CCDC78-216ENST00000544996 POC1B-GALNT4F8VUJ3 575 aa14.9□□□□□ -0.02
CCDC78-216ENST00000544996 SGK494L7N484 410 aa14.9□□□□□ -0.02
CCDC78-216ENST00000544996 MAP2K7O14733 419 aa14.9□□□□□ -0.02
CCDC78-216ENST00000544996 FFAR3O14843 346 aa14.9□□□□□ -0.02
CCDC78-216ENST00000544996 GPR42O15529 346 aa14.9□□□□□ -0.02
CCDC78-216ENST00000544996 GSTM2P28161 218 aa14.9□□□□□ -0.02
CCDC78-216ENST00000544996 GMPRP36959 345 aa14.9□□□□□ -0.02
CCDC78-216ENST00000544996 CASRP41180 1078 aa14.9□□□□□ -0.02
CCDC78-216ENST00000544996 KCNC1P48547 511 aa14.9□□□□□ -0.02
CCDC78-216ENST00000544996 SOX8P57073 446 aa14.9□□□□□ -0.02
CCDC78-216ENST00000544996 DLG1Q12959 904 aa14.9□□□□□ -0.02
CCDC78-216ENST00000544996 RAPSNQ13702 412 aa14.9□□□□□ -0.02
CCDC78-216ENST00000544996 MYBPC3Q14896 1274 aa14.9□□□□□ -0.02
CCDC78-216ENST00000544996 ACAP2Q15057 778 aa14.9□□□□□ -0.02
CCDC78-216ENST00000544996 PDK4Q16654 411 aa14.9□□□□□ -0.02
CCDC78-216ENST00000544996 SYT16Q17RD7 645 aa14.9□□□□□ -0.02
CCDC78-216ENST00000544996 UBAP2Q5T6F2 1119 aaKnown RBP14.9□□□□□ -0.02
CCDC78-216ENST00000544996 VWA5B1Q5TIE3 1220 aa14.9□□□□□ -0.02
CCDC78-216ENST00000544996 TMIGD1Q6UXZ0 262 aa14.9□□□□□ -0.02
CCDC78-216ENST00000544996 SLCO4C1Q6ZQN7 724 aa14.9□□□□□ -0.02
CCDC78-216ENST00000544996 TRMT10CQ7L0Y3 403 aaKnown RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms