RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 MYBPC3Q14896 1274 aa9.24□□□□□ -0.93
TNFRSF1A-214ENST00000543048 PPP1R3AQ16821 1122 aa9.24□□□□□ -0.93
TNFRSF1A-214ENST00000543048 TUSC1Q2TAM9 212 aa9.24□□□□□ -0.93
TNFRSF1A-214ENST00000543048 KBTBD12Q3ZCT8 623 aa9.24□□□□□ -0.93
TNFRSF1A-214ENST00000543048 ATG9BQ674R7 924 aa9.24□□□□□ -0.93
TNFRSF1A-214ENST00000543048 KIRREL2Q6UWL6 708 aa9.24□□□□□ -0.93
TNFRSF1A-214ENST00000543048 CEP128Q6ZU80 1094 aa9.24□□□□□ -0.93
TNFRSF1A-214ENST00000543048 VN1R4Q7Z5H5 301 aa9.24□□□□□ -0.93
TNFRSF1A-214ENST00000543048 ADAMTSL2Q86TH1 951 aa9.24□□□□□ -0.93
TNFRSF1A-214ENST00000543048 ASPGQ86U10 573 aa9.24□□□□□ -0.93
TNFRSF1A-214ENST00000543048 THOC6Q86W42 341 aaKnown RBP9.24□□□□□ -0.93
TNFRSF1A-214ENST00000543048 PRSS58Q8IYP2 241 aa9.24□□□□□ -0.93
TNFRSF1A-214ENST00000543048 PPM1NQ8N819 430 aa9.24□□□□□ -0.93
TNFRSF1A-214ENST00000543048 FBF1Q8TES7 1133 aa9.24□□□□□ -0.93
TNFRSF1A-214ENST00000543048 SLC5A11Q8WWX8 675 aa9.24□□□□□ -0.93
TNFRSF1A-214ENST00000543048 OR4K3Q96R72 315 aa9.24□□□□□ -0.93
TNFRSF1A-214ENST00000543048 GPR22Q99680 433 aa9.24□□□□□ -0.93
TNFRSF1A-214ENST00000543048 EGFL8Q99944 293 aa9.24□□□□□ -0.93
TNFRSF1A-214ENST00000543048 CRB3Q9BUF7 120 aa9.24□□□□□ -0.93
TNFRSF1A-214ENST00000543048 SARGQ9BW04 601 aa9.24□□□□□ -0.93
TNFRSF1A-214ENST00000543048 TRIM4Q9C037 500 aa9.24□□□□□ -0.93
TNFRSF1A-214ENST00000543048 TGIF2Q9GZN2 237 aa9.24□□□□□ -0.93
TNFRSF1A-214ENST00000543048 EPN3Q9H201 632 aa9.24□□□□□ -0.93
TNFRSF1A-214ENST00000543048 CAB39LQ9H9S4 337 aa9.24□□□□□ -0.93
TNFRSF1A-214ENST00000543048 ZDHHC18Q9NUE0 388 aa9.24□□□□□ -0.93
TNFRSF1A-214ENST00000543048 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.24□□□□□ -0.93
TNFRSF1A-214ENST00000543048 C3orf18Q9UK00 162 aa9.24□□□□□ -0.93
TNFRSF1A-214ENST00000543048 FBXL4Q9UKA2 621 aa9.24□□□□□ -0.93
TNFRSF1A-214ENST00000543048 DYRK1BQ9Y463 629 aa9.24□□□□□ -0.93
TNFRSF1A-214ENST00000543048 MAP4K5Q9Y4K4 846 aa9.24□□□□□ -0.93
TNFRSF1A-214ENST00000543048 OARD1Q9Y530 152 aa9.24□□□□□ -0.93
TNFRSF1A-214ENST00000543048 HS3ST3B1Q9Y662 390 aa9.24□□□□□ -0.93
TNFRSF1A-214ENST00000543048 V9GYY5 206 aaPredicted RBP9.24□□□□□ -0.93
TNFRSF1A-214ENST00000543048 SHANK1Q9Y566 2161 aa9.24□□□□□ -0.93
TNFRSF1A-214ENST00000543048 UBR5O95071 2799 aaPredicted RBP9.24□□□□□ -0.93
TNFRSF1A-214ENST00000543048 TRBC2A0A5B9 178 aa9.23□□□□□ -0.93
TNFRSF1A-214ENST00000543048 ESYT3A0FGR9 886 aa9.23□□□□□ -0.93
TNFRSF1A-214ENST00000543048 H2AFYO75367 372 aaKnown RBP9.23□□□□□ -0.93
TNFRSF1A-214ENST00000543048 IPO13O94829 963 aaKnown RBP9.23□□□□□ -0.93
TNFRSF1A-214ENST00000543048 WISP3O95389 354 aaPredicted RBP9.23□□□□□ -0.93
TNFRSF1A-214ENST00000543048 NSA2O95478 260 aaKnown RBP9.23□□□□□ -0.93
TNFRSF1A-214ENST00000543048 C1QAP02745 245 aa9.23□□□□□ -0.93
TNFRSF1A-214ENST00000543048 STATHP02808 62 aa9.23□□□□□ -0.93
TNFRSF1A-214ENST00000543048 HEXBP07686 556 aa9.23□□□□□ -0.93
TNFRSF1A-214ENST00000543048 CXCR2P25025 360 aa9.23□□□□□ -0.93
TNFRSF1A-214ENST00000543048 RAB10P61026 200 aa9.23□□□□□ -0.93
TNFRSF1A-214ENST00000543048 ATP6V0D1P61421 351 aa9.23□□□□□ -0.93
TNFRSF1A-214ENST00000543048 NAB1Q13506 487 aa9.23□□□□□ -0.93
TNFRSF1A-214ENST00000543048 PWP1Q13610 501 aa9.23□□□□□ -0.93
TNFRSF1A-214ENST00000543048 RAPSNQ13702 412 aa9.23□□□□□ -0.93
TNFRSF1A-214ENST00000543048 LAPTM4AQ15012 233 aa9.23□□□□□ -0.93
TNFRSF1A-214ENST00000543048 TSNQ15631 228 aaKnown RBP9.23□□□□□ -0.93
TNFRSF1A-214ENST00000543048 ERCC6LQ2NKX8 1250 aa9.23□□□□□ -0.93
TNFRSF1A-214ENST00000543048 TUBB8Q3ZCM7 444 aa9.23□□□□□ -0.93
TNFRSF1A-214ENST00000543048 COLEC12Q5KU26 742 aa9.23□□□□□ -0.93
TNFRSF1A-214ENST00000543048 CDKL4Q5MAI5 379 aa9.23□□□□□ -0.93
TNFRSF1A-214ENST00000543048 CATSPEREQ5SY80 951 aa9.23□□□□□ -0.93
TNFRSF1A-214ENST00000543048 VWA5B1Q5TIE3 1220 aa9.23□□□□□ -0.93
TNFRSF1A-214ENST00000543048 DESI1Q6ICB0 168 aa9.23□□□□□ -0.93
TNFRSF1A-214ENST00000543048 TMEM214Q6NUQ4 689 aaKnown RBP9.23□□□□□ -0.93
TNFRSF1A-214ENST00000543048 NXPE4Q6UWF7 544 aa9.23□□□□□ -0.93
TNFRSF1A-214ENST00000543048 FRA10AC1Q70Z53 315 aa9.23□□□□□ -0.93
TNFRSF1A-214ENST00000543048 GPSM1Q86YR5 675 aa9.23□□□□□ -0.93
TNFRSF1A-214ENST00000543048 AMER3Q8N944 861 aa9.23□□□□□ -0.93
TNFRSF1A-214ENST00000543048 OR11G2Q8NGC1 345 aa9.23□□□□□ -0.93
TNFRSF1A-214ENST00000543048 OR9A4Q8NGU2 314 aa9.23□□□□□ -0.93
TNFRSF1A-214ENST00000543048 NEIL2Q969S2 332 aa9.23□□□□□ -0.93
TNFRSF1A-214ENST00000543048 RHBDF1Q96CC6 855 aa9.23□□□□□ -0.93
TNFRSF1A-214ENST00000543048 MACROD1Q9BQ69 325 aa9.23□□□□□ -0.93
TNFRSF1A-214ENST00000543048 CAPS2Q9BXY5 557 aa9.23□□□□□ -0.93
TNFRSF1A-214ENST00000543048 TSPYL1Q9H0U9 437 aa9.23□□□□□ -0.93
TNFRSF1A-214ENST00000543048 ZNF552Q9H707 407 aaPredicted RBP9.23□□□□□ -0.93
TNFRSF1A-214ENST00000543048 PELI2Q9HAT8 420 aa9.23□□□□□ -0.93
TNFRSF1A-214ENST00000543048 ANKHQ9HCJ1 492 aa9.23□□□□□ -0.93
TNFRSF1A-214ENST00000543048 C14orf105Q9NVL8 296 aa9.23□□□□□ -0.93
TNFRSF1A-214ENST00000543048 MTRF1LQ9UGC7 380 aaKnown RBP9.23□□□□□ -0.93
TNFRSF1A-214ENST00000543048 SLC22A14Q9Y267 594 aa9.23□□□□□ -0.93
TNFRSF1A-214ENST00000543048 MRPS2Q9Y399 296 aaKnown RBP9.23□□□□□ -0.93
TNFRSF1A-214ENST00000543048 SLC22A7Q9Y694 548 aa9.23□□□□□ -0.93
TNFRSF1A-214ENST00000543048 KCNE2Q9Y6J6 123 aa9.23□□□□□ -0.93
TNFRSF1A-214ENST00000543048 ZGRF1Q86YA3 2104 aa9.23□□□□□ -0.93
TNFRSF1A-214ENST00000543048 SVILO95425 2214 aa9.22□□□□□ -0.93
TNFRSF1A-214ENST00000543048 TTLL8A6PVC2 850 aa9.22□□□□□ -0.93
TNFRSF1A-214ENST00000543048 IDSB3KWA1 339 aa9.22□□□□□ -0.93
TNFRSF1A-214ENST00000543048 MASP2O00187 686 aa9.22□□□□□ -0.93
TNFRSF1A-214ENST00000543048 FFAR3O14843 346 aa9.22□□□□□ -0.93
TNFRSF1A-214ENST00000543048 PCDH17O14917 1159 aa9.22□□□□□ -0.93
TNFRSF1A-214ENST00000543048 GPR42O15529 346 aa9.22□□□□□ -0.93
TNFRSF1A-214ENST00000543048 PHGDHO43175 533 aaKnown RBP9.22□□□□□ -0.93
TNFRSF1A-214ENST00000543048 FAM155BO75949 473 aa9.22□□□□□ -0.93
TNFRSF1A-214ENST00000543048 BMP10O95393 424 aa9.22□□□□□ -0.93
TNFRSF1A-214ENST00000543048 ALPPP05187 535 aa9.22□□□□□ -0.93
TNFRSF1A-214ENST00000543048 RHOXF2BP0C7M4 288 aa9.22□□□□□ -0.93
TNFRSF1A-214ENST00000543048 SLC35G6P0C7Q6 338 aa9.22□□□□□ -0.93
TNFRSF1A-214ENST00000543048 CD1DP15813 335 aa9.22□□□□□ -0.93
TNFRSF1A-214ENST00000543048 ITGA3P26006 1051 aa9.22□□□□□ -0.93
TNFRSF1A-214ENST00000543048 CRABP2P29373 138 aa9.22□□□□□ -0.93
TNFRSF1A-214ENST00000543048 AHRP35869 848 aa9.22□□□□□ -0.93
TNFRSF1A-214ENST00000543048 GGT5P36269 586 aa9.22□□□□□ -0.93
TNFRSF1A-214ENST00000543048 MEF2AQ02078 507 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms