RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 CCRL2O00421 344 aa12.72□□□□□ -0.37
TNC-212ENST00000542877 ZNF208O43345 1280 aa12.72□□□□□ -0.37
TNC-212ENST00000542877 PRAMEF11O60813 436 aa12.72□□□□□ -0.37
TNC-212ENST00000542877 RASAL1O95294 804 aa12.72□□□□□ -0.37
TNC-212ENST00000542877 HNRNPCL4P0DMR1 293 aa12.72□□□□□ -0.37
TNC-212ENST00000542877 BMP8BP34820 402 aa12.72□□□□□ -0.37
TNC-212ENST00000542877 GGT5P36269 586 aa12.72□□□□□ -0.37
TNC-212ENST00000542877 ARFRP1Q13795 201 aa12.72□□□□□ -0.37
TNC-212ENST00000542877 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.72□□□□□ -0.37
TNC-212ENST00000542877 BMP8AQ7Z5Y6 402 aa12.72□□□□□ -0.37
TNC-212ENST00000542877 PNLDC1Q8NA58 520 aaKnown RBP12.72□□□□□ -0.37
TNC-212ENST00000542877 CAMKVQ8NCB2 501 aa12.72□□□□□ -0.37
TNC-212ENST00000542877 ZNF431Q8TF32 576 aaPredicted RBP12.72□□□□□ -0.37
TNC-212ENST00000542877 CD180Q99467 661 aa12.72□□□□□ -0.37
TNC-212ENST00000542877 GPR88Q9GZN0 384 aa12.72□□□□□ -0.37
TNC-212ENST00000542877 NSUN3Q9H649 340 aaKnown RBP12.72□□□□□ -0.37
TNC-212ENST00000542877 FBRSL1Q9HCM7 1045 aaKnown RBP12.72□□□□□ -0.37
TNC-212ENST00000542877 DUOX1Q9NRD9 1551 aa12.72□□□□□ -0.37
TNC-212ENST00000542877 EPCAMP16422 314 aa12.72□□□□□ -0.37
TNC-212ENST00000542877 CXCR1P25024 350 aa12.72□□□□□ -0.37
TNC-212ENST00000542877 CDKL1Q00532 357 aa12.72□□□□□ -0.37
TNC-212ENST00000542877 SP2Q02086 613 aa12.72□□□□□ -0.37
TNC-212ENST00000542877 PON3Q15166 354 aa12.72□□□□□ -0.37
TNC-212ENST00000542877 MYLK3Q32MK0 819 aa12.72□□□□□ -0.37
TNC-212ENST00000542877 AGTRAPQ6RW13 159 aa12.72□□□□□ -0.37
TNC-212ENST00000542877 TMIEQ8NEW7 156 aa12.72□□□□□ -0.37
TNC-212ENST00000542877 PMEPA1Q969W9 287 aa12.72□□□□□ -0.37
TNC-212ENST00000542877 YIPF1Q9Y548 306 aa12.72□□□□□ -0.37
TNC-212ENST00000542877 TCHHQ07283 1943 aa12.72□□□□□ -0.37
TNC-212ENST00000542877 COQ9O75208 318 aa12.72□□□□□ -0.37
TNC-212ENST00000542877 GSTT2P0CG29 244 aa12.72□□□□□ -0.37
TNC-212ENST00000542877 FUT4P22083 530 aa12.72□□□□□ -0.37
TNC-212ENST00000542877 ENPP2Q13822 863 aa12.72□□□□□ -0.37
TNC-212ENST00000542877 KLHL26Q53HC5 615 aa12.72□□□□□ -0.37
TNC-212ENST00000542877 MS4A13Q5J8X5 152 aa12.72□□□□□ -0.37
TNC-212ENST00000542877 C6orf136Q5SQH8 315 aa12.72□□□□□ -0.37
TNC-212ENST00000542877 DNM1P34Q6PK57 102 aa12.72□□□□□ -0.37
TNC-212ENST00000542877 XKRXQ6PP77 449 aa12.72□□□□□ -0.37
TNC-212ENST00000542877 OSTM1Q86WC4 334 aa12.72□□□□□ -0.37
TNC-212ENST00000542877 SLAIN1Q8ND83 568 aa12.72□□□□□ -0.37
TNC-212ENST00000542877 MUS81Q96NY9 551 aa12.72□□□□□ -0.37
TNC-212ENST00000542877 EPYCQ99645 322 aa12.72□□□□□ -0.37
TNC-212ENST00000542877 TSSK6Q9BXA6 273 aa12.72□□□□□ -0.37
TNC-212ENST00000542877 KCNH6Q9H252 994 aa12.72□□□□□ -0.37
TNC-212ENST00000542877 RNF39Q9H2S5 420 aa12.72□□□□□ -0.37
TNC-212ENST00000542877 NUP50Q9UKX7 468 aa12.72□□□□□ -0.37
TNC-212ENST00000542877 SDHDO14521 159 aa12.72□□□□□ -0.37
TNC-212ENST00000542877 ACP5P13686 325 aa12.72□□□□□ -0.37
TNC-212ENST00000542877 HTR1EP28566 365 aa12.72□□□□□ -0.37
TNC-212ENST00000542877 SLC3A1Q07837 685 aa12.72□□□□□ -0.37
TNC-212ENST00000542877 DNASE1L3Q13609 305 aa12.72□□□□□ -0.37
TNC-212ENST00000542877 MPP2Q14168 576 aa12.72□□□□□ -0.37
TNC-212ENST00000542877 RAB39AQ14964 217 aa12.72□□□□□ -0.37
TNC-212ENST00000542877 REM2Q8IYK8 340 aaPredicted RBP12.72□□□□□ -0.37
TNC-212ENST00000542877 SMOQ99835 787 aa12.72□□□□□ -0.37
TNC-212ENST00000542877 MTMR10Q9NXD2 777 aa12.72□□□□□ -0.37
TNC-212ENST00000542877 TAC3Q9UHF0 121 aa12.72□□□□□ -0.37
TNC-212ENST00000542877 MTX2O75431 263 aa12.71□□□□□ -0.37
TNC-212ENST00000542877 ZNF182P17025 639 aaPredicted RBP12.71□□□□□ -0.37
TNC-212ENST00000542877 MAT2AP31153 395 aaKnown RBP12.71□□□□□ -0.37
TNC-212ENST00000542877 BDKRB1P46663 353 aa12.71□□□□□ -0.37
TNC-212ENST00000542877 TAS2R50P59544 299 aa12.71□□□□□ -0.37
TNC-212ENST00000542877 KCNC4Q03721 635 aa12.71□□□□□ -0.37
TNC-212ENST00000542877 MAPK14Q16539 360 aa12.71□□□□□ -0.37
TNC-212ENST00000542877 REEP3Q6NUK4 255 aa12.71□□□□□ -0.37
TNC-212ENST00000542877 RPS27LQ71UM5 84 aaKnown RBP12.71□□□□□ -0.37
TNC-212ENST00000542877 ZNF367Q7RTV3 350 aa12.71□□□□□ -0.37
TNC-212ENST00000542877 GHDCQ8N2G8 530 aa12.71□□□□□ -0.37
TNC-212ENST00000542877 THAP6Q8TBB0 222 aa12.71□□□□□ -0.37
TNC-212ENST00000542877 PEX13Q92968 403 aa12.71□□□□□ -0.37
TNC-212ENST00000542877 CREB3L1Q96BA8 519 aa12.71□□□□□ -0.37
TNC-212ENST00000542877 NXPE2Q96DL1 559 aa12.71□□□□□ -0.37
TNC-212ENST00000542877 BORCS6Q96GS4 357 aa12.71□□□□□ -0.37
TNC-212ENST00000542877 ZC3H10Q96K80 434 aaKnown RBP12.71□□□□□ -0.37
TNC-212ENST00000542877 TSGA13Q96PP4 275 aa12.71□□□□□ -0.37
TNC-212ENST00000542877 J3QLW9 94 aa12.71□□□□□ -0.37
TNC-212ENST00000542877 JUNP05412 331 aaKnown RBP12.71□□□□□ -0.37
TNC-212ENST00000542877 ZNF19P17023 458 aa12.71□□□□□ -0.37
TNC-212ENST00000542877 GFOD2Q3B7J2 385 aa12.71□□□□□ -0.37
TNC-212ENST00000542877 C10orf62Q5T681 223 aaPredicted RBP12.71□□□□□ -0.37
TNC-212ENST00000542877 TMIGD1Q6UXZ0 262 aa12.71□□□□□ -0.37
TNC-212ENST00000542877 YIPF7Q8N8F6 280 aa12.71□□□□□ -0.37
TNC-212ENST00000542877 GOLM1Q8NBJ4 401 aa12.71□□□□□ -0.37
TNC-212ENST00000542877 OR52E4Q8NGH9 312 aa12.71□□□□□ -0.37
TNC-212ENST00000542877 LMO3Q8TAP4 145 aa12.71□□□□□ -0.37
TNC-212ENST00000542877 SETD6Q8TBK2 473 aa12.71□□□□□ -0.37
TNC-212ENST00000542877 SLC5A11Q8WWX8 675 aa12.71□□□□□ -0.37
TNC-212ENST00000542877 WACQ9BTA9 647 aa12.71□□□□□ -0.37
TNC-212ENST00000542877 SIX4Q9UIU6 781 aa12.71□□□□□ -0.37
TNC-212ENST00000542877 FBXO9Q9UK97 447 aaPredicted RBP12.71□□□□□ -0.37
TNC-212ENST00000542877 I3L521 148 aa12.71□□□□□ -0.38
TNC-212ENST00000542877 L7N2F9 121 aa12.71□□□□□ -0.38
TNC-212ENST00000542877 NDUFS4O43181 175 aa12.71□□□□□ -0.38
TNC-212ENST00000542877 IFNA21P01568 189 aa12.71□□□□□ -0.38
TNC-212ENST00000542877 LEPRP48357 1165 aaKnown RBP12.71□□□□□ -0.38
TNC-212ENST00000542877 CYS1Q717R9 158 aa12.71□□□□□ -0.38
TNC-212ENST00000542877 IFNLR1Q8IU57 520 aaPredicted RBP12.71□□□□□ -0.38
TNC-212ENST00000542877 SLC15A3Q8IY34 581 aa12.71□□□□□ -0.38
TNC-212ENST00000542877 BPIFB1Q8TDL5 484 aa12.71□□□□□ -0.38
TNC-212ENST00000542877 OSTF1Q92882 214 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms