RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 C1QTNF3-AMACRE9PGA6 284 aa7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 TLR4O00206 839 aa7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 MUSKO15146 869 aa7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 GPR39O43194 453 aa7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 STSP08842 583 aa7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 BPIP17213 487 aa7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 LAG3P18627 525 aa7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 TLX1P31314 330 aaPredicted RBP7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 CSTF2P33240 577 aaKnown RBP eCLIP7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 GATMP50440 423 aa7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 RAB25P57735 213 aa7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 TAS2R50P59544 299 aa7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 EMX1Q04741 257 aaPredicted RBP7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 SMU1Q2TAY7 513 aa7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 PROX2Q3B8N5 592 aa7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 PLA2G4EQ3MJ16 856 aa7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 ANKDD1AQ495B1 522 aa7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 RTP2Q5QGT7 225 aa7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 PLEKHS1Q5SXH7 462 aa7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 ARMC6Q6NXE6 501 aa7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 TBC1D15Q8TC07 691 aa7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 SCLYQ96I15 445 aa7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 MS4A4AQ96JQ5 239 aa7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 INPP5KQ9BT40 448 aa7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 ZSCAN5AQ9BUG6 496 aa7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 DSN1Q9H410 356 aa7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 GPN2Q9H9Y4 310 aaPredicted RBP7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 EQTNQ9NQ60 294 aa7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 MS4A12Q9NXJ0 267 aa7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 COMMD3Q9UBI1 195 aa7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 ENPP5Q9UJA9 477 aa7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 SCN1AP35498 2009 aa7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 CACNG3O60359 315 aa7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 C6orf47O95873 294 aa7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 DHFRP00374 187 aa7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 LCKP06239 509 aa7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 H1F0P07305 194 aaKnown RBP7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 HPGDP15428 266 aa7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 GJA1P17302 382 aa7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 GTF2E2P29084 291 aaKnown RBP7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 SHMT2P34897 504 aa7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 PIK3CBP42338 1070 aa7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 GJA8P48165 433 aa7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 SP140Q13342 867 aa7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 SELPLGQ14242 412 aa7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 KLHL22Q53GT1 634 aa7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 TICAM1Q8IUC6 712 aa7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 SLC30A8Q8IWU4 369 aa7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 TRPV1Q8NER1 839 aa7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 OR13F1Q8NGS4 319 aa7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 ADAMTS15Q8TE58 950 aa7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 SH3RF2Q8TEC5 729 aa7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 FERD3LQ96RJ6 166 aa7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 MGLLQ99685 303 aa7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 TMEM175Q9BSA9 504 aa7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 MIR1-1HGQ9H1L0 117 aa7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 TRIT1Q9H3H1 467 aaKnown RBP7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 ZCCHC3Q9NUD5 404 aaKnown RBP7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 ING4Q9UNL4 249 aa7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 MAN2B2Q9Y2E5 1009 aa7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 ZNF780BQ9Y6R6 833 aa7.94□□□□□ -1.14
PRKAB1-207ENST00000542698 ISM1B1AKI9 464 aa7.93□□□□□ -1.14
PRKAB1-207ENST00000542698 I6L893 689 aaPredicted RBP7.93□□□□□ -1.14
PRKAB1-207ENST00000542698 CCRL2O00421 344 aa7.93□□□□□ -1.14
PRKAB1-207ENST00000542698 OR1F1O43749 312 aa7.93□□□□□ -1.14
PRKAB1-207ENST00000542698 PRNPP04156 253 aa7.93□□□□□ -1.14
PRKAB1-207ENST00000542698 C8AP07357 584 aa7.93□□□□□ -1.14
PRKAB1-207ENST00000542698 JUPP14923 745 aa7.93□□□□□ -1.14
PRKAB1-207ENST00000542698 CCND3P30281 292 aaPredicted RBP7.93□□□□□ -1.14
PRKAB1-207ENST00000542698 KCNC4Q03721 635 aa7.93□□□□□ -1.14
PRKAB1-207ENST00000542698 ZNF763Q0D2J5 394 aa7.93□□□□□ -1.14
PRKAB1-207ENST00000542698 PPIGQ13427 754 aaKnown RBP eCLIP7.93□□□□□ -1.14
PRKAB1-207ENST00000542698 C5orf22Q49AR2 442 aa7.93□□□□□ -1.14
PRKAB1-207ENST00000542698 ATP13A5Q4VNC0 1218 aa7.93□□□□□ -1.14
PRKAB1-207ENST00000542698 ARSIQ5FYB1 569 aa7.93□□□□□ -1.14
PRKAB1-207ENST00000542698 LCN1P1Q5VSP4 162 aa7.93□□□□□ -1.14
PRKAB1-207ENST00000542698 PLEKHG7Q6ZR37 379 aa7.93□□□□□ -1.14
PRKAB1-207ENST00000542698 FGD2Q7Z6J4 655 aa7.93□□□□□ -1.14
PRKAB1-207ENST00000542698 GALNT13Q8IUC8 556 aa7.93□□□□□ -1.14
PRKAB1-207ENST00000542698 RFKQ969G6 155 aa7.93□□□□□ -1.14
PRKAB1-207ENST00000542698 APIPQ96GX9 242 aa7.93□□□□□ -1.14
PRKAB1-207ENST00000542698 ZNF514Q96K75 400 aaPredicted RBP7.93□□□□□ -1.14
PRKAB1-207ENST00000542698 ART5Q96L15 291 aa7.93□□□□□ -1.14
PRKAB1-207ENST00000542698 CITED4Q96RK1 184 aa7.93□□□□□ -1.14
PRKAB1-207ENST00000542698 UCK2Q9BZX2 261 aa7.93□□□□□ -1.14
PRKAB1-207ENST00000542698 OR2AG1Q9H205 316 aa7.93□□□□□ -1.14
PRKAB1-207ENST00000542698 IL1RAPQ9NPH3 570 aa7.93□□□□□ -1.14
PRKAB1-207ENST00000542698 IMP3Q9NV31 184 aaKnown RBP7.93□□□□□ -1.14
PRKAB1-207ENST00000542698 INTS6Q9UL03 887 aaKnown RBP7.93□□□□□ -1.14
PRKAB1-207ENST00000542698 DLGAP4Q9Y2H0 992 aa7.93□□□□□ -1.14
PRKAB1-207ENST00000542698 A0A1B0GW55 424 aa7.93□□□□□ -1.14
PRKAB1-207ENST00000542698 KRBA1A5PL33 1030 aa7.93□□□□□ -1.14
PRKAB1-207ENST00000542698 PDPK1O15530 556 aa7.93□□□□□ -1.14
PRKAB1-207ENST00000542698 CHST10O43529 356 aa7.93□□□□□ -1.14
PRKAB1-207ENST00000542698 DUX4L2P0CJ85 424 aa7.93□□□□□ -1.14
PRKAB1-207ENST00000542698 DUX4L3P0CJ86 424 aa7.93□□□□□ -1.14
PRKAB1-207ENST00000542698 DUX4L4P0CJ87 422 aa7.93□□□□□ -1.14
PRKAB1-207ENST00000542698 DUX4L5P0CJ88 424 aa7.93□□□□□ -1.14
PRKAB1-207ENST00000542698 DUX4L6P0CJ89 424 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms