RNA–Protein interactions for RNA: ENST00000542416.1

UBC-211, Transcript of ubiquitin C, humanhuman

TSL 4

Gene UBC, Length 517 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-211ENST00000542416 JAK1P23458 1154 aa8.41□□□□□ -1.06
UBC-211ENST00000542416 MSX1P28360 303 aa8.41□□□□□ -1.06
UBC-211ENST00000542416 FMO4P31512 558 aa8.41□□□□□ -1.06
UBC-211ENST00000542416 TRHRP34981 398 aaPredicted RBP8.41□□□□□ -1.06
UBC-211ENST00000542416 GRK3P35626 688 aa8.41□□□□□ -1.06
UBC-211ENST00000542416 GRIA1P42261 906 aa8.41□□□□□ -1.06
UBC-211ENST00000542416 NPY2RP49146 381 aa8.41□□□□□ -1.06
UBC-211ENST00000542416 HLCSP50747 726 aa8.41□□□□□ -1.06
UBC-211ENST00000542416 OR4D2P58180 307 aa8.41□□□□□ -1.06
UBC-211ENST00000542416 TAP2Q03519 686 aa8.41□□□□□ -1.06
UBC-211ENST00000542416 TBX2Q13207 712 aaPredicted RBP8.41□□□□□ -1.06
UBC-211ENST00000542416 USP10Q14694 798 aaKnown RBP8.41□□□□□ -1.06
UBC-211ENST00000542416 HERC3Q15034 1050 aa8.41□□□□□ -1.06
UBC-211ENST00000542416 KLHL38Q2WGJ6 581 aa8.41□□□□□ -1.06
UBC-211ENST00000542416 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.41□□□□□ -1.06
UBC-211ENST00000542416 CTSL3PQ5NE16 218 aa8.41□□□□□ -1.06
UBC-211ENST00000542416 ARMC3Q5W041 872 aa8.41□□□□□ -1.06
UBC-211ENST00000542416 TMEM214Q6NUQ4 689 aaKnown RBP8.41□□□□□ -1.06
UBC-211ENST00000542416 AADACL2Q6P093 401 aa8.41□□□□□ -1.06
UBC-211ENST00000542416 ARHGAP11AQ6P4F7 1023 aa8.41□□□□□ -1.06
UBC-211ENST00000542416 C4orf22Q6V702 233 aa8.41□□□□□ -1.06
UBC-211ENST00000542416 C3P1Q6ZMU1 363 aa8.41□□□□□ -1.06
UBC-211ENST00000542416 CEP128Q6ZU80 1094 aa8.41□□□□□ -1.06
UBC-211ENST00000542416 PEX26Q7Z412 305 aa8.41□□□□□ -1.06
UBC-211ENST00000542416 TGIF2LYQ8IUE0 185 aa8.41□□□□□ -1.06
UBC-211ENST00000542416 CHERPQ8IWX8 916 aaKnown RBP8.41□□□□□ -1.06
UBC-211ENST00000542416 DMRTC2Q8IXT2 367 aaPredicted RBP8.41□□□□□ -1.06
UBC-211ENST00000542416 TXLNBQ8N3L3 684 aa8.41□□□□□ -1.06
UBC-211ENST00000542416 CCDC89Q8N998 374 aa8.41□□□□□ -1.06
UBC-211ENST00000542416 ELP5Q8TE02 316 aa8.41□□□□□ -1.06
UBC-211ENST00000542416 ZNF480Q8WV37 535 aa8.41□□□□□ -1.06
UBC-211ENST00000542416 PRAP1Q96NZ9 151 aa8.41□□□□□ -1.06
UBC-211ENST00000542416 BIRC8Q96P09 236 aa8.41□□□□□ -1.06
UBC-211ENST00000542416 PKP4Q99569 1192 aa8.41□□□□□ -1.06
UBC-211ENST00000542416 CXXC4Q9H2H0 198 aa8.41□□□□□ -1.06
UBC-211ENST00000542416 CDCP1Q9H5V8 836 aa8.41□□□□□ -1.06
UBC-211ENST00000542416 TREX1Q9NSU2 369 aa8.41□□□□□ -1.06
UBC-211ENST00000542416 PAK5Q9P286 719 aa8.41□□□□□ -1.06
UBC-211ENST00000542416 MARCH4Q9P2E8 410 aaPredicted RBP8.41□□□□□ -1.06
UBC-211ENST00000542416 KLHL42Q9P2K6 505 aa8.41□□□□□ -1.06
UBC-211ENST00000542416 SLC22A7Q9Y694 548 aa8.41□□□□□ -1.06
UBC-211ENST00000542416 NIPBLQ6KC79 2804 aaeCLIP8.41□□□□□ -1.062e-7■■■□□ 16.7
UBC-211ENST00000542416 A0A1B0GTH9 108 aa8.4□□□□□ -1.06
UBC-211ENST00000542416 KRT87PA6NCN2 255 aa8.4□□□□□ -1.06
UBC-211ENST00000542416 SGK494L7N484 410 aa8.4□□□□□ -1.06
UBC-211ENST00000542416 P2RX6O15547 441 aa8.4□□□□□ -1.06
UBC-211ENST00000542416 SLC35G6P0C7Q6 338 aa8.4□□□□□ -1.06
UBC-211ENST00000542416 ENO3P13929 434 aaPredicted RBP8.4□□□□□ -1.06
UBC-211ENST00000542416 FOSL1P15407 271 aa8.4□□□□□ -1.06
UBC-211ENST00000542416 IL1RNP18510 177 aa8.4□□□□□ -1.06
UBC-211ENST00000542416 OGNP20774 298 aaKnown RBP8.4□□□□□ -1.06
UBC-211ENST00000542416 DNAJA1P31689 397 aaKnown RBP8.4□□□□□ -1.06
UBC-211ENST00000542416 PEX19P40855 299 aa8.4□□□□□ -1.06
UBC-211ENST00000542416 EFNA3P52797 238 aa8.4□□□□□ -1.06
UBC-211ENST00000542416 SLC26A5P58743 744 aa8.4□□□□□ -1.06
UBC-211ENST00000542416 HSF1Q00613 529 aa8.4□□□□□ -1.06
UBC-211ENST00000542416 MYBPHQ13203 477 aa8.4□□□□□ -1.06
UBC-211ENST00000542416 TYSND1Q2T9J0 566 aa8.4□□□□□ -1.06
UBC-211ENST00000542416 NCCRP1Q6ZVX7 275 aaPredicted RBP8.4□□□□□ -1.06
UBC-211ENST00000542416 CD163Q86VB7 1156 aa8.4□□□□□ -1.06
UBC-211ENST00000542416 CPSF7Q8N684 471 aaKnown RBP8.4□□□□□ -1.06
UBC-211ENST00000542416 LRRC57Q8N9N7 239 aa8.4□□□□□ -1.06
UBC-211ENST00000542416 C16orf52Q8NHV5 167 aa8.4□□□□□ -1.06
UBC-211ENST00000542416 LPGAT1Q92604 370 aa8.4□□□□□ -1.06
UBC-211ENST00000542416 NPAS2Q99743 824 aa8.4□□□□□ -1.06
UBC-211ENST00000542416 CLK4Q9HAZ1 481 aaKnown RBP8.4□□□□□ -1.06
UBC-211ENST00000542416 EIF2B3Q9NR50 452 aaKnown RBP8.4□□□□□ -1.06
UBC-211ENST00000542416 HCN3Q9P1Z3 774 aa8.4□□□□□ -1.06
UBC-211ENST00000542416 TFR2Q9UP52 801 aa8.4□□□□□ -1.06
UBC-211ENST00000542416 ZNF148Q9UQR1 794 aa8.4□□□□□ -1.06
UBC-211ENST00000542416 RNF6Q9Y252 685 aa8.4□□□□□ -1.06
UBC-211ENST00000542416 R3HDM2Q9Y2K5 976 aaKnown RBP8.4□□□□□ -1.06
UBC-211ENST00000542416 EPN1Q9Y6I3 576 aaPredicted RBP8.4□□□□□ -1.06
UBC-211ENST00000542416 NCOA6Q14686 2063 aaPredicted RBP8.4□□□□□ -1.06
UBC-211ENST00000542416 LIASO43766 372 aa8.39□□□□□ -1.07
UBC-211ENST00000542416 NIPSNAP2O75323 286 aa8.39□□□□□ -1.07
UBC-211ENST00000542416 TOXO94900 526 aa8.39□□□□□ -1.07
UBC-211ENST00000542416 VAPBO95292 243 aa8.39□□□□□ -1.07
UBC-211ENST00000542416 SYF2O95926 243 aaKnown RBP8.39□□□□□ -1.07
UBC-211ENST00000542416 FHP07954 510 aa8.39□□□□□ -1.07
UBC-211ENST00000542416 MPC1LP0DKB6 136 aa8.39□□□□□ -1.07
UBC-211ENST00000542416 DRD2P14416 443 aa8.39□□□□□ -1.07
UBC-211ENST00000542416 HOXB4P17483 251 aaPredicted RBP8.39□□□□□ -1.07
UBC-211ENST00000542416 PAMP19021 973 aa8.39□□□□□ -1.07
UBC-211ENST00000542416 TFEBP19484 476 aa8.39□□□□□ -1.07
UBC-211ENST00000542416 PTMSP20962 102 aa8.39□□□□□ -1.07
UBC-211ENST00000542416 CCND1P24385 295 aa8.39□□□□□ -1.07
UBC-211ENST00000542416 TPP2P29144 1249 aaPredicted RBP8.39□□□□□ -1.07
UBC-211ENST00000542416 PTGER1P34995 402 aa8.39□□□□□ -1.07
UBC-211ENST00000542416 MEOX1P50221 254 aa8.39□□□□□ -1.07
UBC-211ENST00000542416 IST1P53990 364 aa8.39□□□□□ -1.07
UBC-211ENST00000542416 SESN2P58004 480 aaPredicted RBP8.39□□□□□ -1.07
UBC-211ENST00000542416 MLF1P58340 268 aa8.39□□□□□ -1.07
UBC-211ENST00000542416 RHAGQ02094 409 aa8.39□□□□□ -1.07
UBC-211ENST00000542416 TFF3Q07654 80 aa8.39□□□□□ -1.07
UBC-211ENST00000542416 RPS6KA1Q15418 735 aa8.39□□□□□ -1.07
UBC-211ENST00000542416 OASLQ15646 514 aaKnown RBP8.39□□□□□ -1.07
UBC-211ENST00000542416 ACSBG2Q5FVE4 666 aa8.39□□□□□ -1.07
UBC-211ENST00000542416 RNFT1Q5M7Z0 435 aa8.39□□□□□ -1.07
UBC-211ENST00000542416 RGS9BPQ6ZS82 235 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms