RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 SLC22A17Q8WUG5 538 aa7.74□□□□□ -1.17
PDLIM5-221ENST00000542407 STYXQ8WUJ0 223 aa7.74□□□□□ -1.17
PDLIM5-221ENST00000542407 ZDHHC12Q96GR4 267 aa7.74□□□□□ -1.17
PDLIM5-221ENST00000542407 SMIM14Q96QK8 99 aa7.74□□□□□ -1.17
PDLIM5-221ENST00000542407 RAD9AQ99638 391 aa7.74□□□□□ -1.17
PDLIM5-221ENST00000542407 BARD1Q99728 777 aaKnown RBP7.74□□□□□ -1.17
PDLIM5-221ENST00000542407 TCF25Q9BQ70 676 aa7.74□□□□□ -1.17
PDLIM5-221ENST00000542407 SLC46A2Q9BY10 475 aa7.74□□□□□ -1.17
PDLIM5-221ENST00000542407 ALOXE3Q9BYJ1 711 aa7.74□□□□□ -1.17
PDLIM5-221ENST00000542407 LTB4R2Q9NPC1 389 aa7.74□□□□□ -1.17
PDLIM5-221ENST00000542407 COQ3Q9NZJ6 369 aa7.74□□□□□ -1.17
PDLIM5-221ENST00000542407 MAT2BQ9NZL9 334 aa7.74□□□□□ -1.17
PDLIM5-221ENST00000542407 SESN1Q9Y6P5 492 aa7.74□□□□□ -1.17
PDLIM5-221ENST00000542407 ATP6AP2A0A1C7CYW4 349 aa7.74□□□□□ -1.17
PDLIM5-221ENST00000542407 A0A1W2PRU2 124 aa7.74□□□□□ -1.17
PDLIM5-221ENST00000542407 SMPD2O60906 423 aa7.74□□□□□ -1.17
PDLIM5-221ENST00000542407 ATP6AP2O75787 350 aa7.74□□□□□ -1.17
PDLIM5-221ENST00000542407 LRG1P02750 347 aa7.74□□□□□ -1.17
PDLIM5-221ENST00000542407 PIRTP0C851 137 aa7.74□□□□□ -1.17
PDLIM5-221ENST00000542407 SRCP12931 536 aa7.74□□□□□ -1.17
PDLIM5-221ENST00000542407 NCK1P16333 377 aa7.74□□□□□ -1.17
PDLIM5-221ENST00000542407 HOXB8P17481 243 aaPredicted RBP7.74□□□□□ -1.17
PDLIM5-221ENST00000542407 POU4F1Q01851 419 aa7.74□□□□□ -1.17
PDLIM5-221ENST00000542407 CAMK1Q14012 370 aa7.74□□□□□ -1.17
PDLIM5-221ENST00000542407 AANATQ16613 207 aa7.74□□□□□ -1.17
PDLIM5-221ENST00000542407 LIPMQ5VYY2 423 aa7.74□□□□□ -1.17
PDLIM5-221ENST00000542407 ZYG11AQ6WRX3 759 aa7.74□□□□□ -1.17
PDLIM5-221ENST00000542407 CADM2Q8N3J6 435 aa7.74□□□□□ -1.17
PDLIM5-221ENST00000542407 MRPL43Q8N983 215 aaKnown RBP7.74□□□□□ -1.17
PDLIM5-221ENST00000542407 DCAF4L2Q8NA75 395 aa7.74□□□□□ -1.17
PDLIM5-221ENST00000542407 OR13C4Q8NGS5 318 aa7.74□□□□□ -1.17
PDLIM5-221ENST00000542407 BLOC1S5Q8TDH9 187 aa7.74□□□□□ -1.17
PDLIM5-221ENST00000542407 MTFMTQ96DP5 389 aaKnown RBP7.74□□□□□ -1.17
PDLIM5-221ENST00000542407 ELMO2Q96JJ3 720 aa7.74□□□□□ -1.17
PDLIM5-221ENST00000542407 PKP4Q99569 1192 aa7.74□□□□□ -1.17
PDLIM5-221ENST00000542407 TMEM121BQ9BXQ6 578 aaPredicted RBP7.74□□□□□ -1.17
PDLIM5-221ENST00000542407 C6orf62Q9GZU0 229 aaPredicted RBP7.74□□□□□ -1.17
PDLIM5-221ENST00000542407 CPNE5Q9HCH3 593 aa7.74□□□□□ -1.17
PDLIM5-221ENST00000542407 HCFC1R1Q9NWW0 138 aa7.74□□□□□ -1.17
PDLIM5-221ENST00000542407 CFAP97Q9P2B7 532 aa7.74□□□□□ -1.17
PDLIM5-221ENST00000542407 CD300AQ9UGN4 299 aa7.74□□□□□ -1.17
PDLIM5-221ENST00000542407 TLK1Q9UKI8 766 aa7.74□□□□□ -1.17
PDLIM5-221ENST00000542407 MTCL1Q9Y4B5 1905 aaKnown RBP7.74□□□□□ -1.17
PDLIM5-221ENST00000542407 PMS2P1A4D2B8 440 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 PDZK1P1A8MUH7 402 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 AGRPO00253 132 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 LEFTY2O00292 366 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 GNB5O14775 395 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 CCL16O15467 120 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 NRP2O60462 931 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 UGT2B11O75310 529 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 RPP40O75818 363 aaKnown RBP7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 GOT2P00505 430 aaKnown RBP7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 STMN1P16949 149 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 EN2P19622 333 aaPredicted RBP7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 GTF2E2P29084 291 aaKnown RBP7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 CLCN5P51795 746 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 UBE2IP63279 158 aaKnown RBP7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 TSC22D1Q15714 1073 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 MEP1AQ16819 746 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 COLEC12Q5KU26 742 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 ZNF549Q6P9A3 640 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 TBPL2Q6SJ96 375 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 TMEM207Q6UWW9 146 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 ZNF574Q6ZN55 896 aaPredicted RBP7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 LDB1Q86U70 411 aaPredicted RBP7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 APCDD1Q8J025 514 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 CLYBLQ8N0X4 340 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 EID3Q8N140 333 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 RDH11Q8TC12 318 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 SPPL3Q8TCT6 385 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 MRPS31Q92665 395 aaKnown RBP7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 OCSTAMPQ9BR26 566 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 TTYH2Q9BSA4 534 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 PLSCR3Q9NRY6 295 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 EXD2Q9NVH0 621 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 NLE1Q9NVX2 485 aaPredicted RBP7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 NFKBIL1Q9UBC1 381 aaPredicted RBP7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 RUVBL2Q9Y230 463 aaKnown RBP7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 CCL26Q9Y258 94 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 RAI2Q9Y5P3 530 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 DMRT1Q9Y5R6 373 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 NOTCH4Q99466 2003 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 A0A087X1B8 175 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 CENPXA8MT69 81 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 NR5A2O00482 541 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 SDHDO14521 159 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 ZNF821O75541 412 aaPredicted RBP7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 GLUD1P00367 558 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 BMP1P13497 986 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 PFKLP17858 780 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 MAOBP27338 520 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 G0S2P27469 103 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 FMO4P31512 558 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 CDKN2DP55273 166 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 CLCA4Q14CN2 919 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 CTF1Q16619 201 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 TYSND1Q2T9J0 566 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 ZFP69Q49AA0 526 aa7.73□□□□□ -1.17
PDLIM5-221ENST00000542407 PDSS1Q5T2R2 415 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms