RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 SEL1L2Q5TEA6 688 aa25.23■■□□□ 1.63
CHFR-218ENST00000540963 PAPD4Q6PIY7 484 aaKnown RBP25.23■■□□□ 1.63
CHFR-218ENST00000540963 MEX3BQ6ZN04 569 aaKnown RBP25.23■■□□□ 1.63
CHFR-218ENST00000540963 VN1R4Q7Z5H5 301 aa25.23■■□□□ 1.63
CHFR-218ENST00000540963 PLD3Q8IV08 490 aa25.23■■□□□ 1.63
CHFR-218ENST00000540963 CHERPQ8IWX8 916 aaKnown RBP25.23■■□□□ 1.63
CHFR-218ENST00000540963 REXO1L1PQ8IX06 675 aa25.23■■□□□ 1.63
CHFR-218ENST00000540963 PPFIBP2Q8ND30 876 aa25.23■■□□□ 1.63
CHFR-218ENST00000540963 ASB11Q8WXH4 323 aa25.23■■□□□ 1.63
CHFR-218ENST00000540963 FAM136AQ96C01 138 aa25.23■■□□□ 1.63
CHFR-218ENST00000540963 MFSD3Q96ES6 412 aa25.23■■□□□ 1.63
CHFR-218ENST00000540963 PRAP1Q96NZ9 151 aa25.23■■□□□ 1.63
CHFR-218ENST00000540963 LRFN1Q9P244 771 aa25.23■■□□□ 1.63
CHFR-218ENST00000540963 CRYL1Q9Y2S2 319 aa25.23■■□□□ 1.63
CHFR-218ENST00000540963 ITPR3Q14573 2671 aa25.22■■□□□ 1.63
CHFR-218ENST00000540963 ADAM10O14672 748 aa25.22■■□□□ 1.63
CHFR-218ENST00000540963 RPL22P35268 128 aaKnown RBP25.22■■□□□ 1.63
CHFR-218ENST00000540963 SKIV2L2P42285 1042 aaKnown RBP25.22■■□□□ 1.63
CHFR-218ENST00000540963 SNRPNP63162 240 aaKnown RBP25.22■■□□□ 1.63
CHFR-218ENST00000540963 KIF5AQ12840 1032 aa25.22■■□□□ 1.63
CHFR-218ENST00000540963 KCNJ11Q14654 390 aa25.22■■□□□ 1.63
CHFR-218ENST00000540963 THEMIS2Q5TEJ8 643 aa25.22■■□□□ 1.63
CHFR-218ENST00000540963 PNPLA5Q7Z6Z6 429 aaPredicted RBP25.22■■□□□ 1.63
CHFR-218ENST00000540963 PRUNE1Q86TP1 453 aa25.22■■□□□ 1.63
CHFR-218ENST00000540963 CAMKVQ8NCB2 501 aa25.22■■□□□ 1.63
CHFR-218ENST00000540963 OR1F2PQ96R84 312 aa25.22■■□□□ 1.63
CHFR-218ENST00000540963 ANKHQ9HCJ1 492 aa25.22■■□□□ 1.63
CHFR-218ENST00000540963 GALPQ9UBC7 116 aa25.22■■□□□ 1.63
CHFR-218ENST00000540963 ASB1Q9Y576 335 aa25.22■■□□□ 1.63
CHFR-218ENST00000540963 GFYI3L273 518 aa25.21■■□□□ 1.63
CHFR-218ENST00000540963 ZNF24P17028 368 aa25.21■■□□□ 1.63
CHFR-218ENST00000540963 CLCN7P51798 805 aa25.21■■□□□ 1.63
CHFR-218ENST00000540963 ACTN3Q08043 901 aaPredicted RBP25.21■■□□□ 1.63
CHFR-218ENST00000540963 NSDHLQ15738 373 aa25.21■■□□□ 1.63
CHFR-218ENST00000540963 SFT2D3Q587I9 215 aa25.21■■□□□ 1.63
CHFR-218ENST00000540963 PRSS41Q7RTY9 318 aa25.21■■□□□ 1.63
CHFR-218ENST00000540963 SLC13A5Q86YT5 568 aaPredicted RBP25.21■■□□□ 1.63
CHFR-218ENST00000540963 C1orf54Q8WWF1 131 aa25.21■■□□□ 1.63
CHFR-218ENST00000540963 SDCCAG3Q96C92 435 aa25.21■■□□□ 1.63
CHFR-218ENST00000540963 TM4SF19Q96DZ7 209 aa25.21■■□□□ 1.63
CHFR-218ENST00000540963 TRIM45Q9H8W5 580 aaPredicted RBP25.21■■□□□ 1.63
CHFR-218ENST00000540963 INTS10Q9NVR2 710 aaKnown RBP25.21■■□□□ 1.63
CHFR-218ENST00000540963 HCN3Q9P1Z3 774 aa25.21■■□□□ 1.63
CHFR-218ENST00000540963 SOX13Q9UN79 622 aa25.21■■□□□ 1.63
CHFR-218ENST00000540963 MAGEB17A8MXT2 336 aa25.2■■□□□ 1.62
CHFR-218ENST00000540963 ZBTB14O43829 449 aa25.2■■□□□ 1.62
CHFR-218ENST00000540963 NME2P1O60361 137 aa25.2■■□□□ 1.62
CHFR-218ENST00000540963 MPC1LP0DKB6 136 aa25.2■■□□□ 1.62
CHFR-218ENST00000540963 ENO3P13929 434 aaPredicted RBP25.2■■□□□ 1.62
CHFR-218ENST00000540963 IL1RNP18510 177 aa25.2■■□□□ 1.62
CHFR-218ENST00000540963 NME2P22392 152 aa25.2■■□□□ 1.62
CHFR-218ENST00000540963 CDK16Q00536 496 aa25.2■■□□□ 1.62
CHFR-218ENST00000540963 USP10Q14694 798 aaKnown RBP25.2■■□□□ 1.62
CHFR-218ENST00000540963 ABRAXAS2Q15018 415 aa25.2■■□□□ 1.62
CHFR-218ENST00000540963 KIAA0930Q6ICG6 404 aaPredicted RBP25.2■■□□□ 1.62
CHFR-218ENST00000540963 NCCRP1Q6ZVX7 275 aaPredicted RBP25.2■■□□□ 1.62
CHFR-218ENST00000540963 POGLUT1Q8NBL1 392 aa25.2■■□□□ 1.62
CHFR-218ENST00000540963 PCBD2Q9H0N5 130 aa25.2■■□□□ 1.62
CHFR-218ENST00000540963 PPT2Q9UMR5 302 aa25.2■■□□□ 1.62
CHFR-218ENST00000540963 SLC22A7Q9Y694 548 aa25.2■■□□□ 1.62
CHFR-218ENST00000540963 HCFC1P51610 2035 aa25.2■■□□□ 1.62
CHFR-218ENST00000540963 FOXO6A8MYZ6 492 aa25.19■■□□□ 1.62
CHFR-218ENST00000540963 SGK494L7N484 410 aa25.19■■□□□ 1.62
CHFR-218ENST00000540963 MAN1A2O60476 641 aa25.19■■□□□ 1.62
CHFR-218ENST00000540963 SLC25A12O75746 678 aa25.19■■□□□ 1.62
CHFR-218ENST00000540963 IGFBP2P18065 325 aa25.19■■□□□ 1.62
CHFR-218ENST00000540963 SLC26A5P58743 744 aa25.19■■□□□ 1.62
CHFR-218ENST00000540963 MPP1Q00013 466 aa25.19■■□□□ 1.62
CHFR-218ENST00000540963 RHAGQ02094 409 aa25.19■■□□□ 1.62
CHFR-218ENST00000540963 RPS6KA1Q15418 735 aa25.19■■□□□ 1.62
CHFR-218ENST00000540963 MAPKAPK3Q16644 382 aa25.19■■□□□ 1.62
CHFR-218ENST00000540963 RPS19BP1Q86WX3 136 aaKnown RBP25.19■■□□□ 1.62
CHFR-218ENST00000540963 CILP2Q8IUL8 1156 aa25.19■■□□□ 1.62
CHFR-218ENST00000540963 ELP5Q8TE02 316 aa25.19■■□□□ 1.62
CHFR-218ENST00000540963 TSGA10Q9BZW7 698 aa25.19■■□□□ 1.62
CHFR-218ENST00000540963 OR2W5A6NFC9 320 aa25.18■■□□□ 1.62
CHFR-218ENST00000540963 GOLGA8KD6RF30 607 aa25.18■■□□□ 1.62
CHFR-218ENST00000540963 GOLGA8TH3BQL2 631 aa25.18■■□□□ 1.62
CHFR-218ENST00000540963 SYF2O95926 243 aaKnown RBP25.18■■□□□ 1.62
CHFR-218ENST00000540963 ZSCAN5DPP0CG00 497 aa25.18■■□□□ 1.62
CHFR-218ENST00000540963 PAMP19021 973 aa25.18■■□□□ 1.62
CHFR-218ENST00000540963 MGAT1P26572 445 aa25.18■■□□□ 1.62
CHFR-218ENST00000540963 IMPA1P29218 277 aa25.18■■□□□ 1.62
CHFR-218ENST00000540963 SNX1Q13596 522 aa25.18■■□□□ 1.62
CHFR-218ENST00000540963 DRICH1Q6PGQ1 229 aaPredicted RBP25.18■■□□□ 1.62
CHFR-218ENST00000540963 CENPUQ71F23 418 aa25.18■■□□□ 1.62
CHFR-218ENST00000540963 CDCP1Q9H5V8 836 aa25.18■■□□□ 1.62
CHFR-218ENST00000540963 CCDC177Q9NQR7 707 aaPredicted RBP25.18■■□□□ 1.62
CHFR-218ENST00000540963 ABCF3Q9NUQ8 709 aa25.18■■□□□ 1.62
CHFR-218ENST00000540963 SYBUQ9NX95 663 aa25.18■■□□□ 1.62
CHFR-218ENST00000540963 NDC80O14777 642 aa25.17■■□□□ 1.62
CHFR-218ENST00000540963 CYB561P49447 251 aa25.17■■□□□ 1.62
CHFR-218ENST00000540963 BASP1P80723 227 aaKnown RBP25.17■■□□□ 1.62
CHFR-218ENST00000540963 CCNG2Q16589 344 aa25.17■■□□□ 1.62
CHFR-218ENST00000540963 FGD2Q7Z6J4 655 aa25.17■■□□□ 1.62
CHFR-218ENST00000540963 PRELID2Q8N945 189 aa25.17■■□□□ 1.62
CHFR-218ENST00000540963 ASB5Q8WWX0 329 aa25.17■■□□□ 1.62
CHFR-218ENST00000540963 KCNJ9Q92806 393 aa25.17■■□□□ 1.62
CHFR-218ENST00000540963 LANCL2Q9NS86 450 aa25.17■■□□□ 1.62
CHFR-218ENST00000540963 NEU2Q9Y3R4 380 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms