RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 FOPNLQ96NB1 174 aa6.87□□□□□ -1.31
YBX3-209ENST00000540747 SLC30A3Q99726 388 aa6.87□□□□□ -1.31
YBX3-209ENST00000540747 BAG1Q99933 345 aaPredicted RBP6.87□□□□□ -1.31
YBX3-209ENST00000540747 UTP23Q9BRU9 249 aaKnown RBP6.87□□□□□ -1.31
YBX3-209ENST00000540747 KIFC1Q9BW19 673 aa6.87□□□□□ -1.31
YBX3-209ENST00000540747 YIPF2Q9BWQ6 316 aa6.87□□□□□ -1.31
YBX3-209ENST00000540747 EIF2B3Q9NR50 452 aaKnown RBP6.87□□□□□ -1.31
YBX3-209ENST00000540747 KLHL1Q9NR64 748 aa6.87□□□□□ -1.31
YBX3-209ENST00000540747 PLSCR2Q9NRY7 297 aa6.87□□□□□ -1.31
YBX3-209ENST00000540747 ANKRD10Q9NXR5 420 aa6.87□□□□□ -1.31
YBX3-209ENST00000540747 C19orf25Q9UFG5 118 aaPredicted RBP6.87□□□□□ -1.31
YBX3-209ENST00000540747 NEU2Q9Y3R4 380 aa6.87□□□□□ -1.31
YBX3-209ENST00000540747 EPN1Q9Y6I3 576 aaPredicted RBP6.87□□□□□ -1.31
YBX3-209ENST00000540747 JMJD1CQ15652 2540 aa6.87□□□□□ -1.31
YBX3-209ENST00000540747 DNAJC13O75165 2243 aa6.86□□□□□ -1.31
YBX3-209ENST00000540747 FAM221AA4D161 298 aa6.86□□□□□ -1.31
YBX3-209ENST00000540747 MAGEB17A8MXT2 336 aa6.86□□□□□ -1.31
YBX3-209ENST00000540747 MIF4GDA9UHW6 222 aaKnown RBP6.86□□□□□ -1.31
YBX3-209ENST00000540747 H3BMM5 538 aa6.86□□□□□ -1.31
YBX3-209ENST00000540747 GFYI3L273 518 aa6.86□□□□□ -1.31
YBX3-209ENST00000540747 SMAPO00193 183 aa6.86□□□□□ -1.31
YBX3-209ENST00000540747 KIF5CO60282 957 aa6.86□□□□□ -1.31
YBX3-209ENST00000540747 NDUFS3O75489 264 aa6.86□□□□□ -1.31
YBX3-209ENST00000540747 SLC25A12O75746 678 aa6.86□□□□□ -1.31
YBX3-209ENST00000540747 TOXO94900 526 aa6.86□□□□□ -1.31
YBX3-209ENST00000540747 TSPAN12O95859 305 aa6.86□□□□□ -1.31
YBX3-209ENST00000540747 GAS8O95995 478 aa6.86□□□□□ -1.31
YBX3-209ENST00000540747 STATHP02808 62 aa6.86□□□□□ -1.31
YBX3-209ENST00000540747 ETS1P14921 441 aa6.86□□□□□ -1.31
YBX3-209ENST00000540747 CD46P15529 392 aa6.86□□□□□ -1.31
YBX3-209ENST00000540747 ZNF24P17028 368 aa6.86□□□□□ -1.31
YBX3-209ENST00000540747 IL1RNP18510 177 aa6.86□□□□□ -1.31
YBX3-209ENST00000540747 MSX1P28360 303 aa6.86□□□□□ -1.31
YBX3-209ENST00000540747 IMPA1P29218 277 aa6.86□□□□□ -1.31
YBX3-209ENST00000540747 CASQ1P31415 396 aa6.86□□□□□ -1.31
YBX3-209ENST00000540747 CYLC1P35663 651 aaPredicted RBP6.86□□□□□ -1.31
YBX3-209ENST00000540747 AVPR1BP47901 424 aa6.86□□□□□ -1.31
YBX3-209ENST00000540747 SLC26A5P58743 744 aa6.86□□□□□ -1.31
YBX3-209ENST00000540747 ETF1P62495 437 aaKnown RBP6.86□□□□□ -1.31
YBX3-209ENST00000540747 CRADDP78560 199 aa6.86□□□□□ -1.31
YBX3-209ENST00000540747 NDUFA9Q16795 377 aa6.86□□□□□ -1.31
YBX3-209ENST00000540747 KLHL38Q2WGJ6 581 aa6.86□□□□□ -1.31
YBX3-209ENST00000540747 MINDY4Q4G0A6 757 aa6.86□□□□□ -1.31
YBX3-209ENST00000540747 SFT2D3Q587I9 215 aa6.86□□□□□ -1.31
YBX3-209ENST00000540747 SLC25A25Q6KCM7 469 aa6.86□□□□□ -1.31
YBX3-209ENST00000540747 PAPD4Q6PIY7 484 aaKnown RBP6.86□□□□□ -1.31
YBX3-209ENST00000540747 RAD9BQ6WBX8 426 aa6.86□□□□□ -1.31
YBX3-209ENST00000540747 CYHR1Q6ZMK1 362 aa6.86□□□□□ -1.31
YBX3-209ENST00000540747 C3P1Q6ZMU1 363 aa6.86□□□□□ -1.31
YBX3-209ENST00000540747 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.86□□□□□ -1.31
YBX3-209ENST00000540747 REXO1L1PQ8IX06 675 aa6.86□□□□□ -1.31
YBX3-209ENST00000540747 DMRTC2Q8IXT2 367 aaPredicted RBP6.86□□□□□ -1.31
YBX3-209ENST00000540747 CPSF7Q8N684 471 aaKnown RBP6.86□□□□□ -1.31
YBX3-209ENST00000540747 SLC5A8Q8N695 610 aa6.86□□□□□ -1.31
YBX3-209ENST00000540747 PPFIBP2Q8ND30 876 aa6.86□□□□□ -1.31
YBX3-209ENST00000540747 MNS1Q8NEH6 495 aa6.86□□□□□ -1.31
YBX3-209ENST00000540747 LILRB4Q8NHJ6 448 aa6.86□□□□□ -1.31
YBX3-209ENST00000540747 GSDMBQ8TAX9 411 aa6.86□□□□□ -1.31
YBX3-209ENST00000540747 FAM57AQ8TBR7 257 aa6.86□□□□□ -1.31
YBX3-209ENST00000540747 SKA2Q8WVK7 121 aaPredicted RBP6.86□□□□□ -1.31
YBX3-209ENST00000540747 ASB11Q8WXH4 323 aa6.86□□□□□ -1.31
YBX3-209ENST00000540747 TSLPQ969D9 159 aa6.86□□□□□ -1.31
YBX3-209ENST00000540747 SDCCAG3Q96C92 435 aa6.86□□□□□ -1.31
YBX3-209ENST00000540747 CCDC138Q96M89 665 aa6.86□□□□□ -1.31
YBX3-209ENST00000540747 PANX2Q96RD6 677 aa6.86□□□□□ -1.31
YBX3-209ENST00000540747 TCF12Q99081 682 aa6.86□□□□□ -1.31
YBX3-209ENST00000540747 FRMD8P1Q9BZ68 369 aaPredicted RBP6.86□□□□□ -1.31
YBX3-209ENST00000540747 KCNK13Q9HB14 408 aa6.86□□□□□ -1.31
YBX3-209ENST00000540747 RAB6BQ9NRW1 208 aa6.86□□□□□ -1.31
YBX3-209ENST00000540747 FAM114A2Q9NRY5 505 aa6.86□□□□□ -1.31
YBX3-209ENST00000540747 UTP6Q9NYH9 597 aaKnown RBP6.86□□□□□ -1.31
YBX3-209ENST00000540747 HCN3Q9P1Z3 774 aa6.86□□□□□ -1.31
YBX3-209ENST00000540747 KLHL42Q9P2K6 505 aa6.86□□□□□ -1.31
YBX3-209ENST00000540747 ANAPC5Q9UJX4 755 aa6.86□□□□□ -1.31
YBX3-209ENST00000540747 PPT2Q9UMR5 302 aa6.86□□□□□ -1.31
YBX3-209ENST00000540747 PACSIN2Q9UNF0 486 aaPredicted RBP6.86□□□□□ -1.31
YBX3-209ENST00000540747 SH2B3Q9UQQ2 575 aa6.86□□□□□ -1.31
YBX3-209ENST00000540747 HCFC1P51610 2035 aa6.86□□□□□ -1.31
YBX3-209ENST00000540747 ZNF407Q9C0G0 2248 aa6.85□□□□□ -1.31
YBX3-209ENST00000540747 IGKV3D-11A0A0A0MRZ8 115 aa6.85□□□□□ -1.31
YBX3-209ENST00000540747 ZNF839A8K0R7 811 aa6.85□□□□□ -1.31
YBX3-209ENST00000540747 H7BY64 318 aa6.85□□□□□ -1.31
YBX3-209ENST00000540747 SGK494L7N484 410 aa6.85□□□□□ -1.31
YBX3-209ENST00000540747 PRRG2O14669 202 aa6.85□□□□□ -1.31
YBX3-209ENST00000540747 RDH16O75452 317 aa6.85□□□□□ -1.31
YBX3-209ENST00000540747 FTCDO95954 541 aa6.85□□□□□ -1.31
YBX3-209ENST00000540747 CATP04040 527 aaKnown RBP6.85□□□□□ -1.31
YBX3-209ENST00000540747 APRTP07741 180 aa6.85□□□□□ -1.31
YBX3-209ENST00000540747 ABOP16442 354 aa6.85□□□□□ -1.31
YBX3-209ENST00000540747 OGNP20774 298 aaKnown RBP6.85□□□□□ -1.31
YBX3-209ENST00000540747 IL10P22301 178 aa6.85□□□□□ -1.31
YBX3-209ENST00000540747 HRH2P25021 359 aa6.85□□□□□ -1.31
YBX3-209ENST00000540747 TPP2P29144 1249 aaPredicted RBP6.85□□□□□ -1.31
YBX3-209ENST00000540747 FMO4P31512 558 aa6.85□□□□□ -1.31
YBX3-209ENST00000540747 DNAJA1P31689 397 aaKnown RBP6.85□□□□□ -1.31
YBX3-209ENST00000540747 RPL22P35268 128 aaKnown RBP6.85□□□□□ -1.31
YBX3-209ENST00000540747 COILP38432 576 aaPredicted RBP6.85□□□□□ -1.31
YBX3-209ENST00000540747 ART1P52961 327 aa6.85□□□□□ -1.31
YBX3-209ENST00000540747 SESN2P58004 480 aaPredicted RBP6.85□□□□□ -1.31
YBX3-209ENST00000540747 MLF1P58340 268 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms