RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 PLEKHS1Q5SXH7 462 aa11.86□□□□□ -0.51
NPC1-202ENST00000540608 DEPDC1Q5TB30 811 aa11.86□□□□□ -0.51
NPC1-202ENST00000540608 Q6ZNB5 142 aa11.86□□□□□ -0.51
NPC1-202ENST00000540608 POC5Q8NA72 575 aa11.86□□□□□ -0.51
NPC1-202ENST00000540608 ZNF461Q8TAF7 563 aa11.86□□□□□ -0.51
NPC1-202ENST00000540608 ZNF675Q8TD23 568 aa11.86□□□□□ -0.51
NPC1-202ENST00000540608 C11orf24Q96F05 449 aaPredicted RBP11.86□□□□□ -0.51
NPC1-202ENST00000540608 METTL2AQ96IZ6 378 aaKnown RBP11.86□□□□□ -0.51
NPC1-202ENST00000540608 CORO1BQ9BR76 489 aa11.86□□□□□ -0.51
NPC1-202ENST00000540608 CDADC1Q9BWV3 514 aa11.86□□□□□ -0.51
NPC1-202ENST00000540608 C6orf62Q9GZU0 229 aaPredicted RBP11.86□□□□□ -0.51
NPC1-202ENST00000540608 TMEM184CQ9NVA4 438 aa11.86□□□□□ -0.51
NPC1-202ENST00000540608 ATP11BQ9Y2G3 1177 aa11.86□□□□□ -0.51
NPC1-202ENST00000540608 TSC22D4Q9Y3Q8 395 aa11.86□□□□□ -0.51
NPC1-202ENST00000540608 LYVE1Q9Y5Y7 322 aa11.86□□□□□ -0.51
NPC1-202ENST00000540608 NUP214P35658 2090 aaPredicted RBP11.86□□□□□ -0.51
NPC1-202ENST00000540608 GABRR3A8MPY1 467 aa11.85□□□□□ -0.51
NPC1-202ENST00000540608 SCAMP2O15127 329 aaKnown RBP11.85□□□□□ -0.51
NPC1-202ENST00000540608 GCM2O75603 506 aaPredicted RBP11.85□□□□□ -0.51
NPC1-202ENST00000540608 DBTP11182 482 aaKnown RBP11.85□□□□□ -0.51
NPC1-202ENST00000540608 CD22P20273 847 aa11.85□□□□□ -0.51
NPC1-202ENST00000540608 SELENOWP63302 87 aa11.85□□□□□ -0.51
NPC1-202ENST00000540608 TEKQ02763 1124 aa11.85□□□□□ -0.51
NPC1-202ENST00000540608 PRKCDQ05655 676 aa11.85□□□□□ -0.51
NPC1-202ENST00000540608 TPRG1LQ5T0D9 272 aa11.85□□□□□ -0.51
NPC1-202ENST00000540608 CPTPQ5TA50 214 aa11.85□□□□□ -0.51
NPC1-202ENST00000540608 RFLNAQ6ZTI6 216 aa11.85□□□□□ -0.51
NPC1-202ENST00000540608 TMEM150AQ86TG1 271 aa11.85□□□□□ -0.51
NPC1-202ENST00000540608 METTL3Q86U44 580 aaKnown RBP11.85□□□□□ -0.51
NPC1-202ENST00000540608 CCDC103Q8IW40 242 aa11.85□□□□□ -0.51
NPC1-202ENST00000540608 VPS37AQ8NEZ2 397 aa11.85□□□□□ -0.51
NPC1-202ENST00000540608 VOPP1Q96AW1 172 aa11.85□□□□□ -0.51
NPC1-202ENST00000540608 SCLYQ96I15 445 aa11.85□□□□□ -0.51
NPC1-202ENST00000540608 CCDC59Q9P031 241 aaKnown RBP11.85□□□□□ -0.51
NPC1-202ENST00000540608 NDUFAF4Q9P032 175 aa11.85□□□□□ -0.51
NPC1-202ENST00000540608 VPS4AQ9UN37 437 aa11.85□□□□□ -0.51
NPC1-202ENST00000540608 PPIL1Q9Y3C6 166 aa11.85□□□□□ -0.51
NPC1-202ENST00000540608 YIPF1Q9Y548 306 aa11.85□□□□□ -0.51
NPC1-202ENST00000540608 ANAPC1Q9H1A4 1944 aa11.85□□□□□ -0.51
NPC1-202ENST00000540608 PLXNB3Q9ULL4 1909 aa11.85□□□□□ -0.51
NPC1-202ENST00000540608 ADAMDEC1O15204 470 aa11.85□□□□□ -0.51
NPC1-202ENST00000540608 HOXA2O43364 376 aa11.85□□□□□ -0.51
NPC1-202ENST00000540608 ABLIM3O94929 683 aa11.85□□□□□ -0.51
NPC1-202ENST00000540608 PTTG1O95997 202 aa11.85□□□□□ -0.51
NPC1-202ENST00000540608 ALDH1A1P00352 501 aa11.85□□□□□ -0.51
NPC1-202ENST00000540608 GSSP48637 474 aa11.85□□□□□ -0.51
NPC1-202ENST00000540608 SEPHS1P49903 392 aa11.85□□□□□ -0.51
NPC1-202ENST00000540608 LIMK1P53667 647 aa11.85□□□□□ -0.51
NPC1-202ENST00000540608 ACSM2AQ08AH3 577 aa11.85□□□□□ -0.51
NPC1-202ENST00000540608 PPIGQ13427 754 aaKnown RBP eCLIP11.85□□□□□ -0.512e-6■■□□□ 12.2
NPC1-202ENST00000540608 KCNC3Q14003 757 aa11.85□□□□□ -0.51
NPC1-202ENST00000540608 TEAD4Q15561 434 aa11.85□□□□□ -0.51
NPC1-202ENST00000540608 SF1Q15637 639 aaKnown RBP11.85□□□□□ -0.51
NPC1-202ENST00000540608 XKR6Q5GH73 641 aa11.85□□□□□ -0.51
NPC1-202ENST00000540608 ATAD3BQ5T9A4 648 aa11.85□□□□□ -0.51
NPC1-202ENST00000540608 ACSM2BQ68CK6 577 aa11.85□□□□□ -0.51
NPC1-202ENST00000540608 KIAA1841Q6NSI8 718 aa11.85□□□□□ -0.51
NPC1-202ENST00000540608 SLC5A8Q8N695 610 aa11.85□□□□□ -0.51
NPC1-202ENST00000540608 KBTBD8Q8NFY9 601 aa11.85□□□□□ -0.51
NPC1-202ENST00000540608 OR2AP1Q8NGE2 309 aa11.85□□□□□ -0.51
NPC1-202ENST00000540608 CDC26Q8NHZ8 85 aa11.85□□□□□ -0.51
NPC1-202ENST00000540608 MAL2Q969L2 176 aa11.85□□□□□ -0.51
NPC1-202ENST00000540608 COL21A1Q96P44 957 aa11.85□□□□□ -0.51
NPC1-202ENST00000540608 MTERF1Q99551 399 aaKnown RBP11.85□□□□□ -0.51
NPC1-202ENST00000540608 BBS2Q9BXC9 721 aa11.85□□□□□ -0.51
NPC1-202ENST00000540608 AMBNQ9NP70 447 aa11.85□□□□□ -0.51
NPC1-202ENST00000540608 ABCB8Q9NUT2 735 aa11.85□□□□□ -0.51
NPC1-202ENST00000540608 TESMINQ9Y4I5 508 aa11.85□□□□□ -0.51
NPC1-202ENST00000540608 PCDHGA3Q9Y5H0 932 aa11.85□□□□□ -0.51
NPC1-202ENST00000540608 PCDHGA2Q9Y5H1 932 aa11.85□□□□□ -0.51
NPC1-202ENST00000540608 KRT87PA6NCN2 255 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 TTC36A6NLP5 189 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 SNPHO15079 494 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 KCNK2O95069 426 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 OXSR1O95747 527 aaPredicted RBP11.84□□□□□ -0.51
NPC1-202ENST00000540608 ANXA8P13928 327 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 ATP1B2P14415 290 aaPredicted RBP11.84□□□□□ -0.51
NPC1-202ENST00000540608 PTX3P26022 381 aaPredicted RBP11.84□□□□□ -0.51
NPC1-202ENST00000540608 AQP1P29972 269 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 S100A5P33763 92 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 GRK5P34947 590 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 ASMTP46597 345 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 ANXA8L1Q5VT79 327 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 USP45Q70EL2 814 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 CAMKMTQ7Z624 323 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 AKAP14Q86UN6 197 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 FAM217AQ8IXS0 508 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 REM2Q8IYK8 340 aaPredicted RBP11.84□□□□□ -0.51
NPC1-202ENST00000540608 NAGSQ8N159 534 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 PARP16Q8N5Y8 322 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 C11orf65Q8NCR3 313 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 FAM83FQ8NEG4 500 aaPredicted RBP11.84□□□□□ -0.51
NPC1-202ENST00000540608 DENND6BQ8NEG7 585 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 OR10G2Q8NGC3 310 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 OR4C15Q8NGM1 316 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 SPPL2AQ8TCT8 520 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 CD99L2Q8TCZ2 262 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 RAET1EQ8TD07 263 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 CTRCQ99895 268 aa11.84□□□□□ -0.51
NPC1-202ENST00000540608 ZNF226Q9NYT6 803 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms