RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 GOLGA6L6A8MZA4 724 aa11.31□□□□□ -0.6
CBX3P4-202ENST00000540428 SGK494L7N484 410 aa11.31□□□□□ -0.6
CBX3P4-202ENST00000540428 C8GP07360 202 aa11.31□□□□□ -0.6
CBX3P4-202ENST00000540428 SLC35G6P0C7Q6 338 aa11.31□□□□□ -0.6
CBX3P4-202ENST00000540428 ESRRAP11474 423 aaPredicted RBP11.31□□□□□ -0.6
CBX3P4-202ENST00000540428 CD46P15529 392 aa11.31□□□□□ -0.6
CBX3P4-202ENST00000540428 EEF1DP29692 281 aaKnown RBP11.31□□□□□ -0.6
CBX3P4-202ENST00000540428 GRK3P35626 688 aa11.31□□□□□ -0.6
CBX3P4-202ENST00000540428 CD96P40200 585 aa11.31□□□□□ -0.6
CBX3P4-202ENST00000540428 SLC1A2P43004 574 aa11.31□□□□□ -0.6
CBX3P4-202ENST00000540428 TAS2R50P59544 299 aa11.31□□□□□ -0.6
CBX3P4-202ENST00000540428 ADORA2A-AS1P86434 159 aa11.31□□□□□ -0.6
CBX3P4-202ENST00000540428 ALDH6A1Q02252 535 aaKnown RBP11.31□□□□□ -0.6
CBX3P4-202ENST00000540428 SRSF11Q05519 484 aaKnown RBP11.31□□□□□ -0.6
CBX3P4-202ENST00000540428 SP140Q13342 867 aa11.31□□□□□ -0.6
CBX3P4-202ENST00000540428 OR1C1Q15619 314 aa11.31□□□□□ -0.6
CBX3P4-202ENST00000540428 TRIP13Q15645 432 aaPredicted RBP11.31□□□□□ -0.6
CBX3P4-202ENST00000540428 ANKRD22Q5VYY1 191 aa11.31□□□□□ -0.6
CBX3P4-202ENST00000540428 FCRLBQ6BAA4 426 aa11.31□□□□□ -0.6
CBX3P4-202ENST00000540428 UGT3A1Q6NUS8 523 aa11.31□□□□□ -0.6
CBX3P4-202ENST00000540428 NIPAL1Q6NVV3 410 aa11.31□□□□□ -0.6
CBX3P4-202ENST00000540428 PAPD4Q6PIY7 484 aaKnown RBP11.31□□□□□ -0.6
CBX3P4-202ENST00000540428 PIWIL4Q7Z3Z4 852 aaKnown RBP11.31□□□□□ -0.6
CBX3P4-202ENST00000540428 C17orf64Q86WR6 236 aa11.31□□□□□ -0.6
CBX3P4-202ENST00000540428 SPPL2CQ8IUH8 684 aa11.31□□□□□ -0.6
CBX3P4-202ENST00000540428 CRLF3Q8IUI8 442 aa11.31□□□□□ -0.6
CBX3P4-202ENST00000540428 CPNE9Q8IYJ1 553 aa11.31□□□□□ -0.6
CBX3P4-202ENST00000540428 SPC24Q8NBT2 197 aa11.31□□□□□ -0.6
CBX3P4-202ENST00000540428 FAM98AQ8NCA5 519 aaKnown RBP11.31□□□□□ -0.6
CBX3P4-202ENST00000540428 SLC13A3Q8WWT9 602 aa11.31□□□□□ -0.6
CBX3P4-202ENST00000540428 LURAP1Q96LR2 239 aa11.31□□□□□ -0.6
CBX3P4-202ENST00000540428 SERPINB12Q96P63 405 aa11.31□□□□□ -0.6
CBX3P4-202ENST00000540428 SIGLEC12Q96PQ1 595 aa11.31□□□□□ -0.6
CBX3P4-202ENST00000540428 NPAS2Q99743 824 aa11.31□□□□□ -0.6
CBX3P4-202ENST00000540428 AARSD1Q9BTE6 412 aaKnown RBP11.31□□□□□ -0.6
CBX3P4-202ENST00000540428 SARGQ9BW04 601 aa11.31□□□□□ -0.6
CBX3P4-202ENST00000540428 TRIM8Q9BZR9 551 aa11.31□□□□□ -0.6
CBX3P4-202ENST00000540428 HEATR5BQ9P2D3 2071 aa11.31□□□□□ -0.6
CBX3P4-202ENST00000540428 APCP25054 2843 aa11.3□□□□□ -0.6
CBX3P4-202ENST00000540428 GABRR3A8MPY1 467 aa11.3□□□□□ -0.6
CBX3P4-202ENST00000540428 MAGEB17A8MXT2 336 aa11.3□□□□□ -0.6
CBX3P4-202ENST00000540428 SLC16A5O15375 505 aa11.3□□□□□ -0.6
CBX3P4-202ENST00000540428 CEP104O60308 925 aa11.3□□□□□ -0.6
CBX3P4-202ENST00000540428 KRT14P02533 472 aa11.3□□□□□ -0.6
CBX3P4-202ENST00000540428 STATHP02808 62 aa11.3□□□□□ -0.6
CBX3P4-202ENST00000540428 COILP38432 576 aaPredicted RBP11.3□□□□□ -0.6
CBX3P4-202ENST00000540428 MAGEA3P43357 314 aa11.3□□□□□ -0.6
CBX3P4-202ENST00000540428 VPS41P49754 854 aa11.3□□□□□ -0.6
CBX3P4-202ENST00000540428 RGS4P49798 205 aa11.3□□□□□ -0.6
CBX3P4-202ENST00000540428 SKP1P63208 163 aa11.3□□□□□ -0.6
CBX3P4-202ENST00000540428 RHAGQ02094 409 aa11.3□□□□□ -0.6
CBX3P4-202ENST00000540428 ACTN3Q08043 901 aaPredicted RBP11.3□□□□□ -0.6
CBX3P4-202ENST00000540428 USP10Q14694 798 aaKnown RBP11.3□□□□□ -0.6
CBX3P4-202ENST00000540428 ABRAXAS2Q15018 415 aa11.3□□□□□ -0.6
CBX3P4-202ENST00000540428 HERC3Q15034 1050 aa11.3□□□□□ -0.6
CBX3P4-202ENST00000540428 NSDHLQ15738 373 aa11.3□□□□□ -0.6
CBX3P4-202ENST00000540428 SFT2D3Q587I9 215 aa11.3□□□□□ -0.6
CBX3P4-202ENST00000540428 CAPN13Q6MZZ7 669 aaPredicted RBP11.3□□□□□ -0.6
CBX3P4-202ENST00000540428 AGTRAPQ6RW13 159 aa11.3□□□□□ -0.6
CBX3P4-202ENST00000540428 LCTLQ6UWM7 567 aa11.3□□□□□ -0.6
CBX3P4-202ENST00000540428 SLC26A11Q86WA9 606 aa11.3□□□□□ -0.6
CBX3P4-202ENST00000540428 PDSS2Q86YH6 399 aa11.3□□□□□ -0.6
CBX3P4-202ENST00000540428 AFAP1L2Q8N4X5 818 aa11.3□□□□□ -0.6
CBX3P4-202ENST00000540428 MFSD9Q8NBP5 474 aa11.3□□□□□ -0.6
CBX3P4-202ENST00000540428 KCT2Q8NC54 265 aa11.3□□□□□ -0.6
CBX3P4-202ENST00000540428 TRIM58Q8NG06 486 aa11.3□□□□□ -0.6
CBX3P4-202ENST00000540428 ADAMTS18Q8TE60 1221 aa11.3□□□□□ -0.6
CBX3P4-202ENST00000540428 MTFMTQ96DP5 389 aaKnown RBP11.3□□□□□ -0.6
CBX3P4-202ENST00000540428 FRMD6Q96NE9 622 aa11.3□□□□□ -0.6
CBX3P4-202ENST00000540428 MACROD1Q9BQ69 325 aa11.3□□□□□ -0.6
CBX3P4-202ENST00000540428 HAUS8Q9BT25 410 aa11.3□□□□□ -0.6
CBX3P4-202ENST00000540428 FAM167BQ9BTA0 163 aa11.3□□□□□ -0.6
CBX3P4-202ENST00000540428 SGPP1Q9BX95 441 aa11.3□□□□□ -0.6
CBX3P4-202ENST00000540428 PARVBQ9HBI1 364 aa11.3□□□□□ -0.6
CBX3P4-202ENST00000540428 KLHL1Q9NR64 748 aa11.3□□□□□ -0.6
CBX3P4-202ENST00000540428 LANCL2Q9NS86 450 aa11.3□□□□□ -0.6
CBX3P4-202ENST00000540428 C20orf96Q9NUD7 363 aaPredicted RBP11.3□□□□□ -0.6
CBX3P4-202ENST00000540428 TRMT6Q9UJA5 497 aaKnown RBP11.3□□□□□ -0.6
CBX3P4-202ENST00000540428 TINAGQ9UJW2 476 aa11.3□□□□□ -0.6
CBX3P4-202ENST00000540428 FBXO5Q9UKT4 447 aa11.3□□□□□ -0.6
CBX3P4-202ENST00000540428 PDE10AQ9Y233 779 aa11.3□□□□□ -0.6
CBX3P4-202ENST00000540428 MEMO1Q9Y316 297 aa11.3□□□□□ -0.6
CBX3P4-202ENST00000540428 FEZF1A0PJY2 475 aa11.29□□□□□ -0.6
CBX3P4-202ENST00000540428 OR2W5A6NFC9 320 aa11.29□□□□□ -0.6
CBX3P4-202ENST00000540428 NPIPA5E9PKD4 350 aa11.29□□□□□ -0.6
CBX3P4-202ENST00000540428 FAM227AF5H4B4 570 aa11.29□□□□□ -0.6
CBX3P4-202ENST00000540428 ASNA1O43681 348 aa11.29□□□□□ -0.6
CBX3P4-202ENST00000540428 LCMT2O60294 686 aaKnown RBP11.29□□□□□ -0.6
CBX3P4-202ENST00000540428 RDH16O75452 317 aa11.29□□□□□ -0.6
CBX3P4-202ENST00000540428 NEURL1O76050 574 aa11.29□□□□□ -0.6
CBX3P4-202ENST00000540428 WISP2O76076 250 aa11.29□□□□□ -0.6
CBX3P4-202ENST00000540428 HAUS5O94927 633 aa11.29□□□□□ -0.6
CBX3P4-202ENST00000540428 CLDN14O95500 239 aa11.29□□□□□ -0.6
CBX3P4-202ENST00000540428 SP1P08047 785 aa11.29□□□□□ -0.6
CBX3P4-202ENST00000540428 JAK1P23458 1154 aa11.29□□□□□ -0.6
CBX3P4-202ENST00000540428 SSTR2P30874 369 aa11.29□□□□□ -0.6
CBX3P4-202ENST00000540428 TERF1P54274 439 aa11.29□□□□□ -0.6
CBX3P4-202ENST00000540428 RIPPLY3P57055 190 aa11.29□□□□□ -0.6
CBX3P4-202ENST00000540428 SLC26A5P58743 744 aa11.29□□□□□ -0.6
CBX3P4-202ENST00000540428 MPP1Q00013 466 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms