RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 TCEAL8Q8IYN2 117 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 OR7G3Q8NG95 312 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 MAGED4Q96JG8 741 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 PKP4Q99569 1192 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 TRIT1Q9H3H1 467 aaKnown RBP13.16□□□□□ -0.3
BNIP3-202ENST00000540159 RERGLQ9H628 205 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 GPN2Q9H9Y4 310 aaPredicted RBP13.16□□□□□ -0.3
BNIP3-202ENST00000540159 CHCHD3Q9NX63 227 aaKnown RBP13.16□□□□□ -0.3
BNIP3-202ENST00000540159 PMF1-BGLAPU3KQ54 211 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 RTCAO00442 366 aaKnown RBP13.16□□□□□ -0.3
BNIP3-202ENST00000540159 GFRA2O00451 464 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 SCAMP1O15126 338 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 KPNA5O15131 536 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 RGS10O43665 173 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 ITGB8P26012 769 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 MAPK1P28482 360 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 CLK1P49759 484 aaKnown RBP13.16□□□□□ -0.3
BNIP3-202ENST00000540159 SLC35A2P78381 396 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 SPIBQ01892 262 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 NPRL3Q12980 569 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 OLIG3Q7RTU3 272 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 TRMT11Q7Z4G4 463 aaKnown RBP13.16□□□□□ -0.3
BNIP3-202ENST00000540159 TRIM73Q86UV7 250 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 TERB1Q8NA31 727 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 HTRA1Q92743 480 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 TESCQ96BS2 214 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 ABCB10Q9NRK6 738 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 GPR83Q9NYM4 423 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 MAN2B2Q9Y2E5 1009 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 ZNF510Q9Y2H8 683 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 RBMX2Q9Y388 322 aaKnown RBP13.16□□□□□ -0.3
BNIP3-202ENST00000540159 GMEB1Q9Y692 573 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 PCM1Q15154 2024 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 MICAL3Q7RTP6 2002 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 A8MU76 341 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 HIDE1A8MVS5 230 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 CLDN25C9JDP6 229 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 SUV39H1O43463 412 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 NUAK1O60285 661 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 UGT2B11O75310 529 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 CXCL14O95715 111 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 BMP4P12644 408 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 IMPA1P29218 277 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 MAPK8P45983 427 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 RAE1P78406 368 aaKnown RBP13.16□□□□□ -0.3
BNIP3-202ENST00000540159 RELAQ04206 551 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 EPS8Q12929 822 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 MAD2L1BPQ15013 274 aaPredicted RBP13.16□□□□□ -0.3
BNIP3-202ENST00000540159 PLPP4Q5VZY2 271 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 KDM4DQ6B0I6 523 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 HTR3DQ70Z44 454 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 PLD3Q8IV08 490 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 ENTHD1Q8IYW4 607 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 SLC5A8Q8N695 610 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 L3MBTL4Q8NA19 623 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 NFKBIDQ8NI38 313 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 WDR48Q8TAF3 677 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 CSGALNACT1Q8TDX6 532 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 ZFYVE19Q96K21 471 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 NIPSNAP1Q9BPW8 284 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 ERGIC3Q9Y282 383 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 AGAP14A8MT82 685 aa13.15□□□□□ -0.3
BNIP3-202ENST00000540159 GFYI3L273 518 aa13.15□□□□□ -0.3
BNIP3-202ENST00000540159 WBP4O75554 376 aaKnown RBP13.15□□□□□ -0.3
BNIP3-202ENST00000540159 DNTTP04053 509 aa13.15□□□□□ -0.3
BNIP3-202ENST00000540159 FPR1P21462 350 aa13.15□□□□□ -0.3
BNIP3-202ENST00000540159 CDH3P22223 829 aa13.15□□□□□ -0.3
BNIP3-202ENST00000540159 LIPAP38571 399 aa13.15□□□□□ -0.3
BNIP3-202ENST00000540159 FEN1P39748 380 aaKnown RBP13.15□□□□□ -0.3
BNIP3-202ENST00000540159 BCAP31P51572 246 aa13.15□□□□□ -0.3
BNIP3-202ENST00000540159 CBX3Q13185 183 aa13.15□□□□□ -0.3
BNIP3-202ENST00000540159 CBARPQ8N350 705 aaPredicted RBP13.15□□□□□ -0.3
BNIP3-202ENST00000540159 AP2M1Q96CW1 435 aa13.15□□□□□ -0.3
BNIP3-202ENST00000540159 TM9SF3Q9HD45 589 aa13.15□□□□□ -0.3
BNIP3-202ENST00000540159 TPRKBQ9Y3C4 175 aa13.15□□□□□ -0.3
BNIP3-202ENST00000540159 M0QX08 132 aa13.15□□□□□ -0.3
BNIP3-202ENST00000540159 RFXAPO00287 272 aa13.15□□□□□ -0.3
BNIP3-202ENST00000540159 MYO1DO94832 1006 aa13.15□□□□□ -0.3
BNIP3-202ENST00000540159 CHRM5P08912 532 aaPredicted RBP13.15□□□□□ -0.3
BNIP3-202ENST00000540159 HOXB9P17482 250 aaPredicted RBP13.15□□□□□ -0.3
BNIP3-202ENST00000540159 ALDH9A1P49189 494 aa13.15□□□□□ -0.3
BNIP3-202ENST00000540159 TMC8Q8IU68 726 aa13.15□□□□□ -0.3
BNIP3-202ENST00000540159 SFTPA1Q8IWL2 248 aa13.15□□□□□ -0.3
BNIP3-202ENST00000540159 ECHDC3Q96DC8 303 aa13.15□□□□□ -0.3
BNIP3-202ENST00000540159 APOL4Q9BPW4 351 aa13.15□□□□□ -0.3
BNIP3-202ENST00000540159 OR2AG1Q9H205 316 aa13.15□□□□□ -0.3
BNIP3-202ENST00000540159 ACOT13Q9NPJ3 140 aa13.15□□□□□ -0.3
BNIP3-202ENST00000540159 ASAH2Q9NR71 780 aa13.15□□□□□ -0.3
BNIP3-202ENST00000540159 TMEM39AQ9NV64 488 aa13.15□□□□□ -0.3
BNIP3-202ENST00000540159 WDR70Q9NW82 654 aa13.15□□□□□ -0.3
BNIP3-202ENST00000540159 RAB23Q9ULC3 237 aa13.15□□□□□ -0.3
BNIP3-202ENST00000540159 PLXNB3Q9ULL4 1909 aa13.15□□□□□ -0.3
BNIP3-202ENST00000540159 GRM6O15303 877 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 SLC16A6O15403 523 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 ADAM23O75077 832 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 FGF18O76093 207 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 OLFM2O95897 454 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 EFEMP2O95967 443 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 KLK1P06870 262 aa13.14□□□□□ -0.31
BNIP3-202ENST00000540159 ELFN1P0C7U0 828 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms