RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 ELP5Q8TE02 316 aa10.92□□□□□ -0.66
CLSTN3-209ENST00000539982 TMEM125Q96AQ2 219 aa10.92□□□□□ -0.66
CLSTN3-209ENST00000539982 PKP4Q99569 1192 aa10.92□□□□□ -0.66
CLSTN3-209ENST00000539982 FAM114A2Q9NRY5 505 aa10.92□□□□□ -0.66
CLSTN3-209ENST00000539982 HCN3Q9P1Z3 774 aa10.92□□□□□ -0.66
CLSTN3-209ENST00000539982 ST6GALNAC2Q9UJ37 374 aa10.92□□□□□ -0.66
CLSTN3-209ENST00000539982 TCAF1Q9Y4C2 921 aa10.92□□□□□ -0.66
CLSTN3-209ENST00000539982 KCNE1BA0A087WTH5 132 aa10.91□□□□□ -0.66
CLSTN3-209ENST00000539982 GOLGA6L9A6NEM1 432 aa10.91□□□□□ -0.66
CLSTN3-209ENST00000539982 ZNF839A8K0R7 811 aa10.91□□□□□ -0.66
CLSTN3-209ENST00000539982 ARHGEF33A8MVX0 844 aa10.91□□□□□ -0.66
CLSTN3-209ENST00000539982 MAGEB17A8MXT2 336 aa10.91□□□□□ -0.66
CLSTN3-209ENST00000539982 H7BY64 318 aa10.91□□□□□ -0.66
CLSTN3-209ENST00000539982 SGK494L7N484 410 aa10.91□□□□□ -0.66
CLSTN3-209ENST00000539982 NDUFS3O75489 264 aa10.91□□□□□ -0.66
CLSTN3-209ENST00000539982 CTAG2O75638 210 aa10.91□□□□□ -0.66
CLSTN3-209ENST00000539982 TFEBP19484 476 aa10.91□□□□□ -0.66
CLSTN3-209ENST00000539982 IL10P22301 178 aa10.91□□□□□ -0.66
CLSTN3-209ENST00000539982 TRHRP34981 398 aaPredicted RBP10.91□□□□□ -0.66
CLSTN3-209ENST00000539982 MEOX1P50221 254 aa10.91□□□□□ -0.66
CLSTN3-209ENST00000539982 HLCSP50747 726 aa10.91□□□□□ -0.66
CLSTN3-209ENST00000539982 SLC26A5P58743 744 aa10.91□□□□□ -0.66
CLSTN3-209ENST00000539982 RHAGQ02094 409 aa10.91□□□□□ -0.66
CLSTN3-209ENST00000539982 PMPCAQ10713 525 aa10.91□□□□□ -0.66
CLSTN3-209ENST00000539982 GBX1Q14549 363 aa10.91□□□□□ -0.66
CLSTN3-209ENST00000539982 ABRAXAS2Q15018 415 aa10.91□□□□□ -0.66
CLSTN3-209ENST00000539982 ARHGAP11AQ6P4F7 1023 aa10.91□□□□□ -0.66
CLSTN3-209ENST00000539982 ACAD11Q709F0 780 aa10.91□□□□□ -0.66
CLSTN3-209ENST00000539982 SULF2Q8IWU5 870 aa10.91□□□□□ -0.66
CLSTN3-209ENST00000539982 MPP5Q8N3R9 675 aa10.91□□□□□ -0.66
CLSTN3-209ENST00000539982 C16orf52Q8NHV5 167 aa10.91□□□□□ -0.66
CLSTN3-209ENST00000539982 PRAP1Q96NZ9 151 aa10.91□□□□□ -0.66
CLSTN3-209ENST00000539982 POLDIP3Q9BY77 421 aaKnown RBP10.91□□□□□ -0.66
CLSTN3-209ENST00000539982 ETNK1Q9HBU6 452 aa10.91□□□□□ -0.66
CLSTN3-209ENST00000539982 CHRAC1Q9NRG0 131 aa10.91□□□□□ -0.66
CLSTN3-209ENST00000539982 TSR3Q9UJK0 312 aaKnown RBP10.91□□□□□ -0.66
CLSTN3-209ENST00000539982 EDARQ9UNE0 448 aa10.91□□□□□ -0.66
CLSTN3-209ENST00000539982 TFR2Q9UP52 801 aa10.91□□□□□ -0.66
CLSTN3-209ENST00000539982 KLF13Q9Y2Y9 288 aaPredicted RBP10.91□□□□□ -0.66
CLSTN3-209ENST00000539982 PCDHA13Q9Y5I0 950 aa10.91□□□□□ -0.66
CLSTN3-209ENST00000539982 E7ENX8 843 aa10.9□□□□□ -0.66
CLSTN3-209ENST00000539982 CBFA2T2O43439 604 aa10.9□□□□□ -0.66
CLSTN3-209ENST00000539982 HS6ST1O60243 411 aa10.9□□□□□ -0.66
CLSTN3-209ENST00000539982 KIF5CO60282 957 aa10.9□□□□□ -0.66
CLSTN3-209ENST00000539982 CDC40O60508 579 aaKnown RBP eCLIP10.9□□□□□ -0.66
CLSTN3-209ENST00000539982 PSIP1O75475 530 aaKnown RBP10.9□□□□□ -0.66
CLSTN3-209ENST00000539982 SLC16A8O95907 504 aa10.9□□□□□ -0.66
CLSTN3-209ENST00000539982 STATHP02808 62 aa10.9□□□□□ -0.66
CLSTN3-209ENST00000539982 PTMAP06454 111 aaKnown RBP10.9□□□□□ -0.66
CLSTN3-209ENST00000539982 IL1RNP18510 177 aa10.9□□□□□ -0.66
CLSTN3-209ENST00000539982 ITGA8P53708 1063 aa10.9□□□□□ -0.66
CLSTN3-209ENST00000539982 EIF3BP55884 814 aaKnown RBP10.9□□□□□ -0.66
CLSTN3-209ENST00000539982 OR4D2P58180 307 aa10.9□□□□□ -0.66
CLSTN3-209ENST00000539982 MLF1P58340 268 aa10.9□□□□□ -0.66
CLSTN3-209ENST00000539982 MPP1Q00013 466 aa10.9□□□□□ -0.66
CLSTN3-209ENST00000539982 TAP2Q03519 686 aa10.9□□□□□ -0.66
CLSTN3-209ENST00000539982 CEBPEQ15744 281 aa10.9□□□□□ -0.66
CLSTN3-209ENST00000539982 CMPK2Q5EBM0 449 aa10.9□□□□□ -0.66
CLSTN3-209ENST00000539982 EMC4Q5J8M3 183 aa10.9□□□□□ -0.66
CLSTN3-209ENST00000539982 CTSL3PQ5NE16 218 aa10.9□□□□□ -0.66
CLSTN3-209ENST00000539982 TMEM214Q6NUQ4 689 aaKnown RBP10.9□□□□□ -0.66
CLSTN3-209ENST00000539982 VN1R4Q7Z5H5 301 aa10.9□□□□□ -0.66
CLSTN3-209ENST00000539982 VSTM4Q8IW00 320 aa10.9□□□□□ -0.66
CLSTN3-209ENST00000539982 RPRMLQ8N4K4 120 aa10.9□□□□□ -0.66
CLSTN3-209ENST00000539982 PPFIBP2Q8ND30 876 aa10.9□□□□□ -0.66
CLSTN3-209ENST00000539982 PPHLN1Q8NEY8 458 aaKnown RBP10.9□□□□□ -0.66
CLSTN3-209ENST00000539982 MYRIPQ8NFW9 859 aa10.9□□□□□ -0.66
CLSTN3-209ENST00000539982 SLC35B2Q8TB61 432 aa10.9□□□□□ -0.66
CLSTN3-209ENST00000539982 ZNF480Q8WV37 535 aa10.9□□□□□ -0.66
CLSTN3-209ENST00000539982 ALG3Q92685 438 aa10.9□□□□□ -0.66
CLSTN3-209ENST00000539982 SEC16BQ96JE7 1060 aa10.9□□□□□ -0.66
CLSTN3-209ENST00000539982 CALR3Q96L12 384 aaKnown RBP10.9□□□□□ -0.66
CLSTN3-209ENST00000539982 BIRC8Q96P09 236 aa10.9□□□□□ -0.66
CLSTN3-209ENST00000539982 MACROD1Q9BQ69 325 aa10.9□□□□□ -0.66
CLSTN3-209ENST00000539982 LIME1Q9H400 295 aa10.9□□□□□ -0.66
CLSTN3-209ENST00000539982 ANKHQ9HCJ1 492 aa10.9□□□□□ -0.66
CLSTN3-209ENST00000539982 PLSCR2Q9NRY7 297 aa10.9□□□□□ -0.66
CLSTN3-209ENST00000539982 ABCF3Q9NUQ8 709 aa10.9□□□□□ -0.66
CLSTN3-209ENST00000539982 TMEM184CQ9NVA4 438 aa10.9□□□□□ -0.66
CLSTN3-209ENST00000539982 ZNF358Q9NW07 568 aa10.9□□□□□ -0.66
CLSTN3-209ENST00000539982 AKAP6Q13023 2319 aa10.9□□□□□ -0.67
CLSTN3-209ENST00000539982 FLNAP21333 2647 aaKnown RBP10.89□□□□□ -0.67
CLSTN3-209ENST00000539982 FAM237BA0A1B0GVD1 139 aa10.89□□□□□ -0.67
CLSTN3-209ENST00000539982 H3BMM5 538 aa10.89□□□□□ -0.67
CLSTN3-209ENST00000539982 SMAPO00193 183 aa10.89□□□□□ -0.67
CLSTN3-209ENST00000539982 PROM1O43490 865 aa10.89□□□□□ -0.67
CLSTN3-209ENST00000539982 PEX1O43933 1283 aa10.89□□□□□ -0.67
CLSTN3-209ENST00000539982 PDE9AO76083 593 aa10.89□□□□□ -0.67
CLSTN3-209ENST00000539982 CATP04040 527 aaKnown RBP10.89□□□□□ -0.67
CLSTN3-209ENST00000539982 CHRM3P20309 590 aa10.89□□□□□ -0.67
CLSTN3-209ENST00000539982 DNASE1P24855 282 aa10.89□□□□□ -0.67
CLSTN3-209ENST00000539982 HRH2P25021 359 aa10.89□□□□□ -0.67
CLSTN3-209ENST00000539982 FMO4P31512 558 aa10.89□□□□□ -0.67
CLSTN3-209ENST00000539982 STIP1P31948 543 aaKnown RBP10.89□□□□□ -0.67
CLSTN3-209ENST00000539982 FDFT1P37268 417 aa10.89□□□□□ -0.67
CLSTN3-209ENST00000539982 RFC3P40938 356 aa10.89□□□□□ -0.67
CLSTN3-209ENST00000539982 NUP107P57740 925 aa10.89□□□□□ -0.67
CLSTN3-209ENST00000539982 RPS15AP62244 130 aaKnown RBP10.89□□□□□ -0.67
CLSTN3-209ENST00000539982 ADAM8P78325 824 aa10.89□□□□□ -0.67
CLSTN3-209ENST00000539982 LTBQ06643 244 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms