RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 SHMT2P34897 504 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 ARFRP1Q13795 201 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 ZNF678Q5SXM1 525 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 ZNF227Q86WZ6 799 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 RELL1Q8IUW5 271 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 TMEM126BQ8IUX1 230 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 ZC3H3Q8IXZ2 948 aaKnown RBP6.29□□□□□ -1.4
LSAMP-207ENST00000539563 OR4K17Q8NGC6 315 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 IRF7Q92985 503 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 RDH12Q96NR8 316 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 PCDHB16Q9NRJ7 776 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 SNTG1Q9NSN8 517 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 OAZ3Q9UMX2 235 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 LEFTY2O00292 366 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 FAM189A1O60320 539 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 SIX3O95343 332 aaPredicted RBP6.29□□□□□ -1.4
LSAMP-207ENST00000539563 MAGP20916 626 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 NRIP1P48552 1158 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 SLC11A1P49279 550 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 ZNF234Q14588 700 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 TRAM1Q15629 374 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 ZBED5Q49AG3 693 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 GPRC6AQ5T6X5 926 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 RNF19BQ6ZMZ0 732 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 CMTM8Q8IZV2 173 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 ZNF461Q8TAF7 563 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 TAC3Q9UHF0 121 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 KLHL33A6NCF5 533 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 MANBAO00462 879 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 VEGFDO43915 354 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 MMP20O60882 483 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 DBIP07108 87 aaKnown RBP6.29□□□□□ -1.4
LSAMP-207ENST00000539563 PSKH1P11801 424 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 TCEA1P23193 301 aaKnown RBP6.29□□□□□ -1.4
LSAMP-207ENST00000539563 HRH2P25021 359 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 PDHA2P29803 388 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 WDR4P57081 412 aaKnown RBP6.29□□□□□ -1.4
LSAMP-207ENST00000539563 MC1RQ01726 317 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 SEMG2Q02383 582 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 OGFOD2Q6N063 350 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 SLC39A4Q6P5W5 647 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 ZNF613Q6PF04 617 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 PIM3Q86V86 326 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 ZDHHC12Q96GR4 267 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 FAM83CQ9BQN1 747 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 ORAI3Q9BRQ5 295 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 TRIM36Q9NQ86 728 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 PPM1HQ9ULR3 514 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 MGAT4BQ9UQ53 548 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 IFT52Q9Y366 437 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 TTC24A2A3L6 582 aaPredicted RBP6.29□□□□□ -1.4
LSAMP-207ENST00000539563 HK1P19367 917 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 UQCRC2P22695 453 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 KCNQ1P51787 676 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 ZNF763Q0D2J5 394 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 TMEM115Q12893 351 aaPredicted RBP6.29□□□□□ -1.4
LSAMP-207ENST00000539563 TUBA3EQ6PEY2 450 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 HFE2Q6ZVN8 426 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 OSTM1Q86WC4 334 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 NPAS3Q8IXF0 933 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 OR8H1Q8NGG4 311 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 GRHL3Q8TE85 626 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 RANBP9Q96S59 729 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 COMMD3Q9UBI1 195 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 MAU2Q9Y6X3 613 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 A0A075B6Q4 140 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 C9IYK1 514 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 L7N2F9 121 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 LATS1O95835 1130 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 CFIP05156 583 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 MPC1LP0DKB6 136 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 CREB1P16220 341 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 VAMP2P63027 116 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 RING1Q06587 406 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 UPP1Q16831 310 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 ZNF630Q2M218 657 aaPredicted RBP6.29□□□□□ -1.4
LSAMP-207ENST00000539563 PRAMEF17Q5VTA0 474 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 LMX1AQ8TE12 382 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 TMEM125Q96AQ2 219 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 TMEM80Q96HE8 168 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 CMKLR1Q99788 373 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 REEP4Q9H6H4 257 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 PCDHGA10Q9Y5H3 936 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 TRBC2A0A5B9 178 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 ARL6IP5O75915 188 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 CYP17A1P05093 508 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 UFM1P61960 85 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 CD47Q08722 323 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 TGFBIQ15582 683 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 CNPY1Q3B7I2 92 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 KCT2Q8NC54 265 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 BRD7Q9NPI1 651 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 GIN1Q9NXP7 522 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 ITGB4P16144 1822 aa6.29□□□□□ -1.4
LSAMP-207ENST00000539563 A0A0J9YVX5 310 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 C2orf74A8MZ97 194 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 MATN2O00339 956 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 MUSKO15146 869 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 DLX3O60479 287 aa6.28□□□□□ -1.4
LSAMP-207ENST00000539563 PRKD3O94806 890 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms