RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 SLC39A8Q9C0K1 460 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 LSG1Q9H089 658 aaKnown RBP0.96□□□□□ -2.26
HIF1A-204ENST00000539097 TAS2R3Q9NYW6 316 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 PTTG2Q9NZH5 202 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 MTUS1Q9ULD2 1270 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 ABCA7Q8IZY2 2146 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 PCDH11YQ9BZA8 1340 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 EDDM13A0A1B0GTR0 161 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 B4DXG7 233 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 F8VVB4 439 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 F8VWA3 439 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 DDX39AO00148 427 aaKnown RBP0.96□□□□□ -2.26
HIF1A-204ENST00000539097 TLX2O43763 284 aaPredicted RBP0.96□□□□□ -2.26
HIF1A-204ENST00000539097 PPFIA2O75334 1257 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 BAG4O95429 457 aaKnown RBP0.96□□□□□ -2.26
HIF1A-204ENST00000539097 SNRNP70P08621 437 aaKnown RBP0.96□□□□□ -2.26
HIF1A-204ENST00000539097 B4GALT1P15291 398 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 PDGFRAP16234 1089 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 ACAT1P24752 427 aaKnown RBP0.96□□□□□ -2.26
HIF1A-204ENST00000539097 PTPN4P29074 926 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 PRPHP41219 470 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 SLC6A8P48029 635 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 EFNA3P52797 238 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 CAPZA1P52907 286 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 CRYBB1P53674 252 aaPredicted RBP0.96□□□□□ -2.26
HIF1A-204ENST00000539097 C21orf58P58505 322 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 BTG1P62324 171 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 MAB21L1Q13394 359 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 RBMS2Q15434 407 aaKnown RBP0.96□□□□□ -2.26
HIF1A-204ENST00000539097 ZSCAN23Q3MJ62 389 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 NHSL2Q5HYW2 709 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 RIPPLY2Q5TAB7 128 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 ALKBH5Q6P6C2 394 aaKnown RBP0.96□□□□□ -2.26
HIF1A-204ENST00000539097 RHBDF2Q6PJF5 856 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 FIP1L1Q6UN15 594 aaKnown RBP0.96□□□□□ -2.26
HIF1A-204ENST00000539097 DLEU7Q6UYE1 221 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 LEKR1Q6ZMV7 388 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 ZNF771Q7L3S4 317 aaPredicted RBP0.96□□□□□ -2.26
HIF1A-204ENST00000539097 SHFQ7M4L6 423 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 BHLHA15Q7RTS1 189 aaPredicted RBP0.96□□□□□ -2.26
HIF1A-204ENST00000539097 GPR142Q7Z601 462 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 ZNF554Q86TJ5 538 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 NT5DC3Q86UY8 548 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 AMIGO1Q86WK6 493 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 SERPINA12Q8IW75 414 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 ZC3H3Q8IXZ2 948 aaKnown RBP0.96□□□□□ -2.26
HIF1A-204ENST00000539097 SYCP3Q8IZU3 236 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 CLYBLQ8N0X4 340 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 TRIML1Q8N9V2 468 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 WDSUB1Q8N9V3 476 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 RNF149Q8NC42 400 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 IPMKQ8NFU5 416 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 OR10G7Q8NGN6 311 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 OR52I2Q8NH67 350 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 FBXO30Q8TB52 745 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 GANCQ8TET4 914 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 CHPT1Q8WUD6 406 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 OIT3Q8WWZ8 545 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 TAF4BQ92750 862 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 C16orf58Q96GQ5 468 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 SENP5Q96HI0 755 aaPredicted RBP0.96□□□□□ -2.26
HIF1A-204ENST00000539097 S1PR3Q99500 378 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 PKP4Q99569 1192 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 CPNE1Q99829 537 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 ZPBPQ9BS86 351 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 UTP14AQ9BVJ6 771 aaKnown RBP0.96□□□□□ -2.26
HIF1A-204ENST00000539097 TDRD1Q9BXT4 1180 aaKnown RBP0.96□□□□□ -2.26
HIF1A-204ENST00000539097 ZMYND12Q9H0C1 365 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 FN3KQ9H479 309 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 HPF1Q9NWY4 346 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 OR6C3Q9NZP0 311 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 SIX4Q9UIU6 781 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 ZNF490Q9ULM2 529 aaPredicted RBP0.96□□□□□ -2.26
HIF1A-204ENST00000539097 TMCC3Q9ULS5 477 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 SLC8A2Q9UPR5 921 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 RNF115Q9Y4L5 304 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 PIK3R4Q99570 1358 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 COL5A2P05997 1499 aaPredicted RBP0.96□□□□□ -2.26
HIF1A-204ENST00000539097 ATP6AP2A0A1C7CYW4 349 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 RPS10-NUDT3A0A1W2PQS6 291 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 OR5K3A6NET4 321 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 TRIM64A6NGJ6 449 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 TRIM64BA6NI03 449 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 MYMKA6NI61 221 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 SMTNL1A8MU46 457 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 PRSS46E5RG02 174 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 NPIPA2E9PIF3 369 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 PDLIM1O00151 329 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 PPEF2O14830 753 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 MLNRO43193 412 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 ZBTB43O43298 467 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 TSPAN2O60636 221 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 WDR1O75083 606 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 AKAP3O75969 853 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 FSHBP01225 129 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 F7P08709 466 aaPredicted RBP0.96□□□□□ -2.26
HIF1A-204ENST00000539097 PRSS56P0CW18 603 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 IGHV4-31P0DP07 118 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 PDHBP11177 359 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 CYP11B1P15538 503 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms