RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 NR1D2Q14995 579 aa13.55□□□□□ -0.24
CD4-208ENST00000538827 LSM12Q3MHD2 195 aaKnown RBP13.55□□□□□ -0.24
CD4-208ENST00000538827 ZNF425Q6IV72 752 aa13.55□□□□□ -0.24
CD4-208ENST00000538827 NAXDQ8IW45 347 aa13.55□□□□□ -0.24
CD4-208ENST00000538827 HOMEZQ8IX15 550 aa13.55□□□□□ -0.24
CD4-208ENST00000538827 LAS2Q8IYD9 372 aa13.55□□□□□ -0.24
CD4-208ENST00000538827 OR4K1Q8NGD4 311 aa13.55□□□□□ -0.24
CD4-208ENST00000538827 RHBDD1Q8TEB9 315 aa13.55□□□□□ -0.24
CD4-208ENST00000538827 ZCCHC14Q8WYQ9 949 aaKnown RBP13.55□□□□□ -0.24
CD4-208ENST00000538827 GATA6Q92908 595 aa13.55□□□□□ -0.24
CD4-208ENST00000538827 MAP3K3Q99759 626 aa13.55□□□□□ -0.24
CD4-208ENST00000538827 C1orf50Q9BV19 199 aa13.55□□□□□ -0.24
CD4-208ENST00000538827 ACPTQ9BZG2 426 aa13.55□□□□□ -0.24
CD4-208ENST00000538827 TWSG1Q9GZX9 223 aa13.55□□□□□ -0.24
CD4-208ENST00000538827 SEMA6CQ9H3T2 930 aa13.55□□□□□ -0.24
CD4-208ENST00000538827 AKTIPQ9H8T0 292 aa13.55□□□□□ -0.24
CD4-208ENST00000538827 DMRT3Q9NQL9 472 aa13.55□□□□□ -0.24
CD4-208ENST00000538827 POLR3HQ9Y535 204 aaPredicted RBP13.55□□□□□ -0.24
CD4-208ENST00000538827 A0A0J9YVX5 310 aa13.54□□□□□ -0.24
CD4-208ENST00000538827 EME2A4GXA9 379 aaPredicted RBP13.54□□□□□ -0.24
CD4-208ENST00000538827 TLCD2A6NGC4 264 aa13.54□□□□□ -0.24
CD4-208ENST00000538827 SLC9B1P1A6NJY1 282 aa13.54□□□□□ -0.24
CD4-208ENST00000538827 MAGEB17A8MXT2 336 aa13.54□□□□□ -0.24
CD4-208ENST00000538827 B4GAT1O43505 415 aa13.54□□□□□ -0.24
CD4-208ENST00000538827 KIF1CO43896 1103 aaKnown RBP13.54□□□□□ -0.24
CD4-208ENST00000538827 CKMT1AP12532 417 aa13.54□□□□□ -0.24
CD4-208ENST00000538827 EZRP15311 586 aaKnown RBP13.54□□□□□ -0.24
CD4-208ENST00000538827 ST6GAL1P15907 406 aa13.54□□□□□ -0.24
CD4-208ENST00000538827 LBPP18428 481 aa13.54□□□□□ -0.24
CD4-208ENST00000538827 SERPINB1P30740 379 aa13.54□□□□□ -0.24
CD4-208ENST00000538827 SCTRP47872 440 aa13.54□□□□□ -0.24
CD4-208ENST00000538827 NOVA1P51513 510 aaKnown RBP13.54□□□□□ -0.24
CD4-208ENST00000538827 RPS15AP62244 130 aaKnown RBP13.54□□□□□ -0.24
CD4-208ENST00000538827 FOXC1Q12948 553 aa13.54□□□□□ -0.24
CD4-208ENST00000538827 TUBB3Q13509 450 aa13.54□□□□□ -0.24
CD4-208ENST00000538827 DEFB110Q30KQ9 67 aa13.54□□□□□ -0.24
CD4-208ENST00000538827 TMEM198Q66K66 360 aa13.54□□□□□ -0.24
CD4-208ENST00000538827 FCRL6Q6DN72 434 aa13.54□□□□□ -0.24
CD4-208ENST00000538827 USP53Q70EK8 1073 aa13.54□□□□□ -0.24
CD4-208ENST00000538827 ANKRD53Q8N9V6 530 aa13.54□□□□□ -0.24
CD4-208ENST00000538827 FNDC5Q8NAU1 212 aa13.54□□□□□ -0.24
CD4-208ENST00000538827 TTLQ8NG68 377 aa13.54□□□□□ -0.24
CD4-208ENST00000538827 CEP70Q8NHQ1 597 aa13.54□□□□□ -0.24
CD4-208ENST00000538827 BAHD1Q8TBE0 780 aaPredicted RBP13.54□□□□□ -0.24
CD4-208ENST00000538827 ACTRT2Q8TDY3 377 aa13.54□□□□□ -0.24
CD4-208ENST00000538827 ZDHHC12Q96GR4 267 aa13.54□□□□□ -0.24
CD4-208ENST00000538827 MAELQ96JY0 434 aaKnown RBP13.54□□□□□ -0.24
CD4-208ENST00000538827 PPP3R2Q96LZ3 170 aa13.54□□□□□ -0.24
CD4-208ENST00000538827 CD180Q99467 661 aa13.54□□□□□ -0.24
CD4-208ENST00000538827 CCT7Q99832 543 aa13.54□□□□□ -0.24
CD4-208ENST00000538827 NUDT22Q9BRQ3 303 aa13.54□□□□□ -0.24
CD4-208ENST00000538827 PITHD1Q9GZP4 211 aaPredicted RBP13.54□□□□□ -0.24
CD4-208ENST00000538827 LRTM1Q9HBL6 345 aa13.54□□□□□ -0.24
CD4-208ENST00000538827 TMEM9Q9P0T7 183 aa13.54□□□□□ -0.24
CD4-208ENST00000538827 ATXN7L1Q9ULK2 861 aaPredicted RBP13.54□□□□□ -0.24
CD4-208ENST00000538827 TRIM33Q9UPN9 1127 aa13.54□□□□□ -0.24
CD4-208ENST00000538827 ADAMTS20P59510 1910 aa13.54□□□□□ -0.24
CD4-208ENST00000538827 MAST4O15021 2626 aa13.53□□□□□ -0.24
CD4-208ENST00000538827 OR2A25A4D2G3 310 aa13.53□□□□□ -0.24
CD4-208ENST00000538827 SAP18O00422 153 aaKnown RBP13.53□□□□□ -0.24
CD4-208ENST00000538827 FCHO1O14526 889 aa13.53□□□□□ -0.24
CD4-208ENST00000538827 CDX4O14627 284 aaPredicted RBP13.53□□□□□ -0.24
CD4-208ENST00000538827 CASC3O15234 703 aaKnown RBP13.53□□□□□ -0.24
CD4-208ENST00000538827 PRAMEF10O60809 474 aa13.53□□□□□ -0.24
CD4-208ENST00000538827 RSL1D1O76021 490 aaKnown RBP13.53□□□□□ -0.24
CD4-208ENST00000538827 TGFB1P01137 390 aa13.53□□□□□ -0.24
CD4-208ENST00000538827 HSD3B1P14060 373 aa13.53□□□□□ -0.24
CD4-208ENST00000538827 PNLIPP16233 465 aa13.53□□□□□ -0.24
CD4-208ENST00000538827 HSD3B2P26439 372 aa13.53□□□□□ -0.24
CD4-208ENST00000538827 ARL4DP49703 201 aa13.53□□□□□ -0.24
CD4-208ENST00000538827 RAP1GDS1P52306 607 aa13.53□□□□□ -0.24
CD4-208ENST00000538827 CCL7P80098 99 aa13.53□□□□□ -0.24
CD4-208ENST00000538827 CCDC157Q569K6 752 aa13.53□□□□□ -0.24
CD4-208ENST00000538827 TOR1AIP1Q5JTV8 583 aa13.53□□□□□ -0.24
CD4-208ENST00000538827 C10orf62Q5T681 223 aaPredicted RBP13.53□□□□□ -0.24
CD4-208ENST00000538827 CACHD1Q5VU97 1274 aa13.53□□□□□ -0.24
CD4-208ENST00000538827 RNF165Q6ZSG1 346 aa13.53□□□□□ -0.24
CD4-208ENST00000538827 TRIM46Q7Z4K8 759 aa13.53□□□□□ -0.24
CD4-208ENST00000538827 VN1R5Q7Z5H4 357 aa13.53□□□□□ -0.24
CD4-208ENST00000538827 PLXDC1Q8IUK5 500 aa13.53□□□□□ -0.24
CD4-208ENST00000538827 GBP7Q8N8V2 638 aaPredicted RBP13.53□□□□□ -0.24
CD4-208ENST00000538827 MFSD9Q8NBP5 474 aa13.53□□□□□ -0.24
CD4-208ENST00000538827 STON2Q8WXE9 905 aa13.53□□□□□ -0.24
CD4-208ENST00000538827 FCRL4Q96PJ5 515 aa13.53□□□□□ -0.24
CD4-208ENST00000538827 TRAPPC9Q96Q05 1148 aa13.53□□□□□ -0.24
CD4-208ENST00000538827 LRRN3Q9H3W5 708 aa13.53□□□□□ -0.24
CD4-208ENST00000538827 NT5DC2Q9H857 520 aa13.53□□□□□ -0.24
CD4-208ENST00000538827 BRF2Q9HAW0 419 aa13.53□□□□□ -0.24
CD4-208ENST00000538827 C1GALT1Q9NS00 363 aa13.53□□□□□ -0.24
CD4-208ENST00000538827 ADGRE2Q9UHX3 823 aa13.53□□□□□ -0.24
CD4-208ENST00000538827 ZFP69BQ9UJL9 534 aa13.53□□□□□ -0.24
CD4-208ENST00000538827 MN1Q10571 1320 aaPredicted RBP13.53□□□□□ -0.24
CD4-208ENST00000538827 ASXL3Q9C0F0 2248 aa13.53□□□□□ -0.24
CD4-208ENST00000538827 HELZ2Q9BYK8 2649 aaKnown RBP13.53□□□□□ -0.24
CD4-208ENST00000538827 C4orf47A7E2U8 309 aa13.52□□□□□ -0.25
CD4-208ENST00000538827 A8MU76 341 aa13.52□□□□□ -0.25
CD4-208ENST00000538827 LSM1O15116 133 aaKnown RBP13.52□□□□□ -0.25
CD4-208ENST00000538827 UBDO15205 165 aa13.52□□□□□ -0.25
CD4-208ENST00000538827 NDUFS4O43181 175 aa13.52□□□□□ -0.25
CD4-208ENST00000538827 TNFSF14O43557 240 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms