RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 BPIFA1Q9NP55 256 aa17.96■□□□□ 0.47
SFSWAP-207ENST00000538548 FPGTO14772 594 aa17.95■□□□□ 0.46
SFSWAP-207ENST00000538548 SEC14L5O43304 696 aa17.95■□□□□ 0.46
SFSWAP-207ENST00000538548 LRATO95237 230 aa17.95■□□□□ 0.46
SFSWAP-207ENST00000538548 PCSK2P16519 638 aa17.95■□□□□ 0.46
SFSWAP-207ENST00000538548 MAPK1P28482 360 aa17.95■□□□□ 0.46
SFSWAP-207ENST00000538548 PCDH1Q08174 1060 aa17.95■□□□□ 0.46
SFSWAP-207ENST00000538548 GLYR1Q49A26 553 aaPredicted RBP17.95■□□□□ 0.46
SFSWAP-207ENST00000538548 CCDC149Q6ZUS6 474 aa17.95■□□□□ 0.46
SFSWAP-207ENST00000538548 GPR155Q7Z3F1 870 aa17.95■□□□□ 0.46
SFSWAP-207ENST00000538548 FAM20CQ8IXL6 584 aa17.95■□□□□ 0.46
SFSWAP-207ENST00000538548 TP53I13Q8NBR0 393 aaPredicted RBP17.95■□□□□ 0.46
SFSWAP-207ENST00000538548 MAP6Q96JE9 813 aa17.95■□□□□ 0.46
SFSWAP-207ENST00000538548 MS4A4AQ96JQ5 239 aa17.95■□□□□ 0.46
SFSWAP-207ENST00000538548 PTPN18Q99952 460 aa17.95■□□□□ 0.46
SFSWAP-207ENST00000538548 TMEM245Q9H330 911 aa17.95■□□□□ 0.46
SFSWAP-207ENST00000538548 NIPAL2Q9H841 368 aa17.95■□□□□ 0.46
SFSWAP-207ENST00000538548 GABRQQ9UN88 632 aa17.95■□□□□ 0.46
SFSWAP-207ENST00000538548 PCDHB1Q9Y5F3 818 aa17.95■□□□□ 0.46
SFSWAP-207ENST00000538548 IQCMA0A1B0GVH7 501 aa17.95■□□□□ 0.46
SFSWAP-207ENST00000538548 TREHO43280 583 aa17.95■□□□□ 0.46
SFSWAP-207ENST00000538548 PDYNP01213 254 aa17.95■□□□□ 0.46
SFSWAP-207ENST00000538548 BRCC3P46736 316 aa17.95■□□□□ 0.46
SFSWAP-207ENST00000538548 RGS4P49798 205 aa17.95■□□□□ 0.46
SFSWAP-207ENST00000538548 KCNQ1P51787 676 aa17.95■□□□□ 0.46
SFSWAP-207ENST00000538548 MTAPQ13126 283 aa17.95■□□□□ 0.46
SFSWAP-207ENST00000538548 FAM214AQ32MH5 1076 aa17.95■□□□□ 0.46
SFSWAP-207ENST00000538548 CDONQ4KMG0 1287 aa17.95■□□□□ 0.46
SFSWAP-207ENST00000538548 DPY19L3Q6ZPD9 716 aa17.95■□□□□ 0.46
SFSWAP-207ENST00000538548 IDO2Q6ZQW0 420 aa17.95■□□□□ 0.46
SFSWAP-207ENST00000538548 TRIM48Q8IWZ4 208 aa17.95■□□□□ 0.46
SFSWAP-207ENST00000538548 SYNPOQ8N3V7 929 aa17.95■□□□□ 0.46
SFSWAP-207ENST00000538548 YIPF7Q8N8F6 280 aa17.95■□□□□ 0.46
SFSWAP-207ENST00000538548 LPCAT1Q8NF37 534 aa17.95■□□□□ 0.46
SFSWAP-207ENST00000538548 DEDD2Q8WXF8 326 aa17.95■□□□□ 0.46
SFSWAP-207ENST00000538548 OPALINQ96PE5 141 aa17.95■□□□□ 0.46
SFSWAP-207ENST00000538548 PSKH2Q96QS6 385 aa17.95■□□□□ 0.46
SFSWAP-207ENST00000538548 CMAHPQ9Y471 501 aa17.95■□□□□ 0.46
SFSWAP-207ENST00000538548 SH3D21A4FU49 640 aa17.94■□□□□ 0.46
SFSWAP-207ENST00000538548 ARL5CA6NH57 179 aa17.94■□□□□ 0.46
SFSWAP-207ENST00000538548 MAGEB17A8MXT2 336 aa17.94■□□□□ 0.46
SFSWAP-207ENST00000538548 H7C0S8 307 aa17.94■□□□□ 0.46
SFSWAP-207ENST00000538548 INSIG1O15503 277 aa17.94■□□□□ 0.46
SFSWAP-207ENST00000538548 TSPAN3O60637 253 aa17.94■□□□□ 0.46
SFSWAP-207ENST00000538548 B3GAT3O94766 335 aa17.94■□□□□ 0.46
SFSWAP-207ENST00000538548 CLDN9O95484 217 aa17.94■□□□□ 0.46
SFSWAP-207ENST00000538548 SCG5P05408 212 aa17.94■□□□□ 0.46
SFSWAP-207ENST00000538548 ADRA2AP08913 450 aa17.94■□□□□ 0.46
SFSWAP-207ENST00000538548 RGRP47804 291 aa17.94■□□□□ 0.46
SFSWAP-207ENST00000538548 EFEMP1Q12805 493 aa17.94■□□□□ 0.46
SFSWAP-207ENST00000538548 CPSF6Q16630 551 aaKnown RBP eCLIP17.94■□□□□ 0.46
SFSWAP-207ENST00000538548 NATD1Q8N6N6 113 aa17.94■□□□□ 0.46
SFSWAP-207ENST00000538548 WDR36Q8NI36 951 aaKnown RBP17.94■□□□□ 0.46
SFSWAP-207ENST00000538548 LPPQ93052 612 aa17.94■□□□□ 0.46
SFSWAP-207ENST00000538548 REPS1Q96D71 796 aa17.94■□□□□ 0.46
SFSWAP-207ENST00000538548 FAM105AQ9NUU6 356 aa17.94■□□□□ 0.46
SFSWAP-207ENST00000538548 SPEF1Q9Y4P9 236 aa17.94■□□□□ 0.46
SFSWAP-207ENST00000538548 AP1M2Q9Y6Q5 423 aa17.94■□□□□ 0.46
SFSWAP-207ENST00000538548 H3BM21 787 aa17.94■□□□□ 0.46
SFSWAP-207ENST00000538548 SHOXO15266 292 aa17.94■□□□□ 0.46
SFSWAP-207ENST00000538548 TRIM3O75382 744 aaPredicted RBP17.94■□□□□ 0.46
SFSWAP-207ENST00000538548 PTX3P26022 381 aaPredicted RBP17.94■□□□□ 0.46
SFSWAP-207ENST00000538548 ALDH9A1P49189 494 aa17.94■□□□□ 0.46
SFSWAP-207ENST00000538548 CRYBA2P53672 197 aa17.94■□□□□ 0.46
SFSWAP-207ENST00000538548 AP2S1P53680 142 aaPredicted RBP17.94■□□□□ 0.46
SFSWAP-207ENST00000538548 PLAG1Q6DJT9 500 aa17.94■□□□□ 0.46
SFSWAP-207ENST00000538548 FAM131AQ6UXB0 335 aa17.94■□□□□ 0.46
SFSWAP-207ENST00000538548 ZNF621Q6ZSS3 439 aa17.94■□□□□ 0.46
SFSWAP-207ENST00000538548 TRAF4Q9BUZ4 470 aaPredicted RBP17.94■□□□□ 0.46
SFSWAP-207ENST00000538548 CINPQ9BW66 212 aaPredicted RBP17.94■□□□□ 0.46
SFSWAP-207ENST00000538548 CIPCQ9C0C6 399 aa17.94■□□□□ 0.46
SFSWAP-207ENST00000538548 FAM83DQ9H4H8 585 aa17.94■□□□□ 0.46
SFSWAP-207ENST00000538548 HHATLQ9HCP6 504 aa17.94■□□□□ 0.46
SFSWAP-207ENST00000538548 TLR8Q9NR97 1041 aaKnown RBP17.94■□□□□ 0.46
SFSWAP-207ENST00000538548 RLIMQ9NVW2 624 aa17.94■□□□□ 0.46
SFSWAP-207ENST00000538548 MOSPD1Q9UJG1 213 aa17.94■□□□□ 0.46
SFSWAP-207ENST00000538548 SCML2Q9UQR0 700 aa17.94■□□□□ 0.46
SFSWAP-207ENST00000538548 ACTL7AQ9Y615 435 aa17.94■□□□□ 0.46
SFSWAP-207ENST00000538548 TRIP12Q14669 1992 aaPredicted RBP17.94■□□□□ 0.46
SFSWAP-207ENST00000538548 PCM1Q15154 2024 aa17.93■□□□□ 0.46
SFSWAP-207ENST00000538548 SCAMP3O14828 347 aaKnown RBP17.93■□□□□ 0.46
SFSWAP-207ENST00000538548 NOS1APO75052 506 aaPredicted RBP17.93■□□□□ 0.46
SFSWAP-207ENST00000538548 CSF3P09919 207 aa17.93■□□□□ 0.46
SFSWAP-207ENST00000538548 CTPS1P17812 591 aa17.93■□□□□ 0.46
SFSWAP-207ENST00000538548 CPN2P22792 545 aa17.93■□□□□ 0.46
SFSWAP-207ENST00000538548 DOC2BQ14184 412 aa17.93■□□□□ 0.46
SFSWAP-207ENST00000538548 QPRTQ15274 297 aa17.93■□□□□ 0.46
SFSWAP-207ENST00000538548 ESCO2Q56NI9 601 aa17.93■□□□□ 0.46
SFSWAP-207ENST00000538548 CREB3L2Q70SY1 520 aa17.93■□□□□ 0.46
SFSWAP-207ENST00000538548 SCN4BQ8IWT1 228 aa17.93■□□□□ 0.46
SFSWAP-207ENST00000538548 THEM5Q8N1Q8 247 aa17.93■□□□□ 0.46
SFSWAP-207ENST00000538548 VANGL1Q8TAA9 524 aaPredicted RBP17.93■□□□□ 0.46
SFSWAP-207ENST00000538548 SELENOMQ8WWX9 145 aa17.93■□□□□ 0.46
SFSWAP-207ENST00000538548 DOHHQ9BU89 302 aa17.93■□□□□ 0.46
SFSWAP-207ENST00000538548 SNTG1Q9NSN8 517 aa17.93■□□□□ 0.46
SFSWAP-207ENST00000538548 M0R129 80 aa17.93■□□□□ 0.46
SFSWAP-207ENST00000538548 GPR39O43194 453 aa17.93■□□□□ 0.46
SFSWAP-207ENST00000538548 C1QBP02746 253 aa17.93■□□□□ 0.46
SFSWAP-207ENST00000538548 CCNYL3P0C7X3 344 aa17.93■□□□□ 0.46
SFSWAP-207ENST00000538548 CDC42P60953 191 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms