RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 UCK2Q9BZX2 261 aa6.48□□□□□ -1.37
USP28-207ENST00000538475 ARHGAP39Q9C0H5 1083 aa6.48□□□□□ -1.37
USP28-207ENST00000538475 SLC7A5P2Q9GIP4 190 aa6.48□□□□□ -1.37
USP28-207ENST00000538475 WNT10AQ9GZT5 417 aa6.48□□□□□ -1.37
USP28-207ENST00000538475 KCNH6Q9H252 994 aa6.48□□□□□ -1.37
USP28-207ENST00000538475 RIBC2Q9H4K1 309 aa6.48□□□□□ -1.37
USP28-207ENST00000538475 ALG9Q9H6U8 611 aa6.48□□□□□ -1.37
USP28-207ENST00000538475 IFT22Q9H7X7 185 aa6.48□□□□□ -1.37
USP28-207ENST00000538475 ATP13A1Q9HD20 1204 aa6.48□□□□□ -1.37
USP28-207ENST00000538475 EMC7Q9NPA0 242 aa6.48□□□□□ -1.37
USP28-207ENST00000538475 PLSCR3Q9NRY6 295 aa6.48□□□□□ -1.37
USP28-207ENST00000538475 ZNF275Q9NSD4 429 aaPredicted RBP6.48□□□□□ -1.37
USP28-207ENST00000538475 RBFOX1Q9NWB1 397 aaKnown RBP6.48□□□□□ -1.37
USP28-207ENST00000538475 PIH1D1Q9NWS0 290 aaKnown RBP6.48□□□□□ -1.37
USP28-207ENST00000538475 DPP3Q9NY33 737 aa6.48□□□□□ -1.37
USP28-207ENST00000538475 TAS2R7Q9NYW3 318 aa6.48□□□□□ -1.37
USP28-207ENST00000538475 EMC3Q9P0I2 261 aa6.48□□□□□ -1.37
USP28-207ENST00000538475 NUFIP1Q9UHK0 495 aaKnown RBP6.48□□□□□ -1.37
USP28-207ENST00000538475 KIF25Q9UIL4 384 aa6.48□□□□□ -1.37
USP28-207ENST00000538475 FBXW11Q9UKB1 542 aa6.48□□□□□ -1.37
USP28-207ENST00000538475 RAB23Q9ULC3 237 aa6.48□□□□□ -1.37
USP28-207ENST00000538475 PNMA8BQ9ULN7 279 aaPredicted RBP6.48□□□□□ -1.37
USP28-207ENST00000538475 RWDD3Q9Y3V2 267 aa6.48□□□□□ -1.37
USP28-207ENST00000538475 CMAHPQ9Y471 501 aa6.48□□□□□ -1.37
USP28-207ENST00000538475 ZNF175Q9Y473 711 aa6.48□□□□□ -1.37
USP28-207ENST00000538475 TNPO3Q9Y5L0 923 aaKnown RBP6.48□□□□□ -1.37
USP28-207ENST00000538475 KLF2Q9Y5W3 355 aaPredicted RBP6.48□□□□□ -1.37
USP28-207ENST00000538475 COMMD10Q9Y6G5 202 aa6.48□□□□□ -1.37
USP28-207ENST00000538475 CCDC88CQ9P219 2028 aa6.48□□□□□ -1.37
USP28-207ENST00000538475 TDRD15B5MCY1 1934 aaKnown RBP6.47□□□□□ -1.37
USP28-207ENST00000538475 NUP214P35658 2090 aaPredicted RBP6.47□□□□□ -1.37
USP28-207ENST00000538475 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 A0A1B0GVI7 797 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 A0A1W2PQ09 198 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 MROH6A6NGR9 719 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 ZNF670-ZNF695F2Z2N8 137 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 INO80B-WBP1J3KQ70 363 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 SGK494L7N484 410 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 SLC28A1O00337 649 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 MYL12BO14950 172 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 PER2O15055 1255 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 MATN3O15232 486 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 SH3BP5O60239 455 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 USP12O75317 370 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 RHOBTB1O94844 696 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 OR4F21O95013 312 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 JCHAINP01591 159 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 C9P02748 559 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 MT-ND1P03886 318 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 RAF1P04049 648 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 SEMG1P04279 462 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 LINC00032P0C843 101 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 STAG3L1P0CL83 205 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 CXCL8P10145 99 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 RRASP10301 218 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 MTHFD2P13995 350 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 MYL12AP19105 171 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 HK1P19367 917 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 PNPLA4P41247 253 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 DAPP51397 102 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 STAT5BP51692 787 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 BLVRAP53004 296 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 DIO3P55073 304 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 RAG2P55895 527 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 RPP38P78345 283 aaKnown RBP6.47□□□□□ -1.37
USP28-207ENST00000538475 SLAMF1Q13291 335 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 VEZF1Q14119 521 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 SF3A2Q15428 464 aaKnown RBP6.47□□□□□ -1.37
USP28-207ENST00000538475 STXBP2Q15833 593 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 NKG7Q16617 165 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 MAPKAPK3Q16644 382 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 SYT16Q17RD7 645 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 HKDC1Q2TB90 917 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 TRIM60Q495X7 471 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 PDZK1Q5T2W1 519 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 DDI2Q5TDH0 399 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 GPR139Q6DWJ6 353 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 PM20D1Q6GTS8 502 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 OR4F3Q6IEY1 312 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 MRNIPQ6NTE8 343 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 BRAT1Q6PJG6 821 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 TEX261Q6UWH6 196 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 ENPP6Q6UWR7 440 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 ARSKQ6UWY0 536 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 GPRIN3Q6ZVF9 776 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 PLEKHM3Q6ZWE6 761 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 ARMCX2Q7L311 632 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 DPH6Q7L8W6 267 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 ZNF605Q86T29 641 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 SERPINA11Q86U17 422 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 SLC44A2Q8IWA5 706 aaPredicted RBP6.47□□□□□ -1.37
USP28-207ENST00000538475 SLC22A15Q8IZD6 547 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 CYP4Z2PQ8N1L4 340 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 TMEM132CQ8N3T6 1108 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 PLA2G15Q8NCC3 412 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 ZNF680Q8NEM1 530 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 FBXO30Q8TB52 745 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 PPP1R13LQ8WUF5 828 aa6.47□□□□□ -1.37
USP28-207ENST00000538475 BCL7CQ8WUZ0 217 aaPredicted RBP6.47□□□□□ -1.37
USP28-207ENST00000538475 AKAP1Q92667 903 aaKnown RBP eCLIP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms