RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 HORMAD2Q8N7B1 307 aa13.18□□□□□ -0.3
SMARCA4-206ENST00000538456 CCDC89Q8N998 374 aa13.18□□□□□ -0.3
SMARCA4-206ENST00000538456 ACRBPQ8NEB7 543 aa13.18□□□□□ -0.3
SMARCA4-206ENST00000538456 PRAP1Q96NZ9 151 aa13.18□□□□□ -0.3
SMARCA4-206ENST00000538456 EBNA1BP2Q99848 306 aaKnown RBP13.18□□□□□ -0.3
SMARCA4-206ENST00000538456 CDCP1Q9H5V8 836 aa13.18□□□□□ -0.3
SMARCA4-206ENST00000538456 ASB1Q9Y576 335 aa13.18□□□□□ -0.3
SMARCA4-206ENST00000538456 FAM90A27PA6NNH2 459 aa13.17□□□□□ -0.3
SMARCA4-206ENST00000538456 E5RI56 91 aa13.17□□□□□ -0.3
SMARCA4-206ENST00000538456 H3BMM5 538 aa13.17□□□□□ -0.3
SMARCA4-206ENST00000538456 NDC80O14777 642 aa13.17□□□□□ -0.3
SMARCA4-206ENST00000538456 NME2P1O60361 137 aa13.17□□□□□ -0.3
SMARCA4-206ENST00000538456 ESR1P03372 595 aa13.17□□□□□ -0.3
SMARCA4-206ENST00000538456 TPOP07202 933 aa13.17□□□□□ -0.3
SMARCA4-206ENST00000538456 ZSCAN5DPP0CG00 497 aa13.17□□□□□ -0.3
SMARCA4-206ENST00000538456 NME2P22392 152 aa13.17□□□□□ -0.3
SMARCA4-206ENST00000538456 BCL6P41182 706 aa13.17□□□□□ -0.3
SMARCA4-206ENST00000538456 TAS2R50P59544 299 aa13.17□□□□□ -0.3
SMARCA4-206ENST00000538456 RELAQ04206 551 aa13.17□□□□□ -0.3
SMARCA4-206ENST00000538456 CUL1Q13616 776 aa13.17□□□□□ -0.3
SMARCA4-206ENST00000538456 USP10Q14694 798 aaKnown RBP13.17□□□□□ -0.3
SMARCA4-206ENST00000538456 RNF187Q5TA31 235 aaPredicted RBP13.17□□□□□ -0.3
SMARCA4-206ENST00000538456 SDCCAG8Q86SQ7 713 aaPredicted RBP13.17□□□□□ -0.3
SMARCA4-206ENST00000538456 CD163Q86VB7 1156 aa13.17□□□□□ -0.3
SMARCA4-206ENST00000538456 TMEM200AQ86VY9 491 aa13.17□□□□□ -0.3
SMARCA4-206ENST00000538456 REXO1L1PQ8IX06 675 aa13.17□□□□□ -0.3
SMARCA4-206ENST00000538456 EID3Q8N140 333 aa13.17□□□□□ -0.3
SMARCA4-206ENST00000538456 KIF2BQ8N4N8 673 aa13.17□□□□□ -0.3
SMARCA4-206ENST00000538456 C1orf54Q8WWF1 131 aa13.17□□□□□ -0.3
SMARCA4-206ENST00000538456 TSLPQ969D9 159 aa13.17□□□□□ -0.3
SMARCA4-206ENST00000538456 MFSD3Q96ES6 412 aa13.17□□□□□ -0.3
SMARCA4-206ENST00000538456 CCDC138Q96M89 665 aa13.17□□□□□ -0.3
SMARCA4-206ENST00000538456 LPAR4Q99677 370 aa13.17□□□□□ -0.3
SMARCA4-206ENST00000538456 TREX2Q9BQ50 279 aaPredicted RBP13.17□□□□□ -0.3
SMARCA4-206ENST00000538456 ANKHQ9HCJ1 492 aa13.17□□□□□ -0.3
SMARCA4-206ENST00000538456 ZNF469Q96JG9 3925 aaPredicted RBP13.17□□□□□ -0.3
SMARCA4-206ENST00000538456 AKAP6Q13023 2319 aa13.17□□□□□ -0.3
SMARCA4-206ENST00000538456 ANKHD1Q8IWZ3 2542 aaKnown RBP13.16□□□□□ -0.3
SMARCA4-206ENST00000538456 NKX2-6A6NCS4 301 aa13.16□□□□□ -0.3
SMARCA4-206ENST00000538456 ZNF860A6NHJ4 632 aa13.16□□□□□ -0.3
SMARCA4-206ENST00000538456 TFECO14948 347 aaPredicted RBP13.16□□□□□ -0.3
SMARCA4-206ENST00000538456 F7P08709 466 aaPredicted RBP13.16□□□□□ -0.3
SMARCA4-206ENST00000538456 MGAT1P26572 445 aa13.16□□□□□ -0.3
SMARCA4-206ENST00000538456 TPP2P29144 1249 aaPredicted RBP13.16□□□□□ -0.3
SMARCA4-206ENST00000538456 RFC3P40938 356 aa13.16□□□□□ -0.3
SMARCA4-206ENST00000538456 TYSND1Q2T9J0 566 aa13.16□□□□□ -0.3
SMARCA4-206ENST00000538456 MEI1Q5TIA1 1274 aa13.16□□□□□ -0.3
SMARCA4-206ENST00000538456 TMEM214Q6NUQ4 689 aaKnown RBP13.16□□□□□ -0.3
SMARCA4-206ENST00000538456 KIAA1328Q86T90 577 aa13.16□□□□□ -0.3
SMARCA4-206ENST00000538456 PDSS2Q86YH6 399 aa13.16□□□□□ -0.3
SMARCA4-206ENST00000538456 MARVELD2Q8N4S9 558 aa13.16□□□□□ -0.3
SMARCA4-206ENST00000538456 KCT2Q8NC54 265 aa13.16□□□□□ -0.3
SMARCA4-206ENST00000538456 NRGNQ92686 78 aa13.16□□□□□ -0.3
SMARCA4-206ENST00000538456 PEX11GQ96HA9 241 aa13.16□□□□□ -0.3
SMARCA4-206ENST00000538456 SLC30A3Q99726 388 aa13.16□□□□□ -0.3
SMARCA4-206ENST00000538456 TRIM5Q9C035 493 aa13.16□□□□□ -0.3
SMARCA4-206ENST00000538456 IL22Q9GZX6 179 aa13.16□□□□□ -0.3
SMARCA4-206ENST00000538456 TSPY26PQ9H489 355 aa13.16□□□□□ -0.3
SMARCA4-206ENST00000538456 NPDC1Q9NQX5 325 aaPredicted RBP13.16□□□□□ -0.3
SMARCA4-206ENST00000538456 SYBUQ9NX95 663 aa13.16□□□□□ -0.3
SMARCA4-206ENST00000538456 PAK5Q9P286 719 aa13.16□□□□□ -0.3
SMARCA4-206ENST00000538456 NAALAD2Q9Y3Q0 740 aa13.16□□□□□ -0.3
SMARCA4-206ENST00000538456 ACANP16112 2415 aa13.15□□□□□ -0.3
SMARCA4-206ENST00000538456 DNAJC13O75165 2243 aa13.15□□□□□ -0.3
SMARCA4-206ENST00000538456 A0A1B0GTH9 108 aa13.15□□□□□ -0.3
SMARCA4-206ENST00000538456 FEZF1A0PJY2 475 aa13.15□□□□□ -0.3
SMARCA4-206ENST00000538456 PFDN6O15212 129 aa13.15□□□□□ -0.3
SMARCA4-206ENST00000538456 CDC40O60508 579 aaKnown RBP eCLIP13.15□□□□□ -0.3
SMARCA4-206ENST00000538456 RPL22P35268 128 aaKnown RBP13.15□□□□□ -0.3
SMARCA4-206ENST00000538456 PTGS2P35354 604 aa13.15□□□□□ -0.3
SMARCA4-206ENST00000538456 COILP38432 576 aaPredicted RBP13.15□□□□□ -0.3
SMARCA4-206ENST00000538456 OR4D2P58180 307 aa13.15□□□□□ -0.3
SMARCA4-206ENST00000538456 SLC26A5P58743 744 aa13.15□□□□□ -0.3
SMARCA4-206ENST00000538456 RPS15AP62244 130 aaKnown RBP13.15□□□□□ -0.3
SMARCA4-206ENST00000538456 BASP1P80723 227 aaKnown RBP13.15□□□□□ -0.3
SMARCA4-206ENST00000538456 RHAGQ02094 409 aa13.15□□□□□ -0.3
SMARCA4-206ENST00000538456 RAD9BQ6WBX8 426 aa13.15□□□□□ -0.3
SMARCA4-206ENST00000538456 RPS19BP1Q86WX3 136 aaKnown RBP13.15□□□□□ -0.3
SMARCA4-206ENST00000538456 SYCE1Q8N0S2 351 aa13.15□□□□□ -0.3
SMARCA4-206ENST00000538456 OR5T3Q8NGG3 340 aa13.15□□□□□ -0.3
SMARCA4-206ENST00000538456 GIMAP7Q8NHV1 300 aa13.15□□□□□ -0.3
SMARCA4-206ENST00000538456 FAM57AQ8TBR7 257 aa13.15□□□□□ -0.3
SMARCA4-206ENST00000538456 OLFM1Q99784 485 aa13.15□□□□□ -0.3
SMARCA4-206ENST00000538456 UCK2Q9BZX2 261 aa13.15□□□□□ -0.3
SMARCA4-206ENST00000538456 TMEM184CQ9NVA4 438 aa13.15□□□□□ -0.3
SMARCA4-206ENST00000538456 BFARQ9NZS9 450 aa13.15□□□□□ -0.3
SMARCA4-206ENST00000538456 SH2B3Q9UQQ2 575 aa13.15□□□□□ -0.3
SMARCA4-206ENST00000538456 PRRC2AP48634 2157 aaKnown RBP13.14□□□□□ -0.31
SMARCA4-206ENST00000538456 MAGEB17A8MXT2 336 aa13.14□□□□□ -0.31
SMARCA4-206ENST00000538456 KIF5CO60282 957 aa13.14□□□□□ -0.31
SMARCA4-206ENST00000538456 IGFBP2P18065 325 aa13.14□□□□□ -0.31
SMARCA4-206ENST00000538456 IMPA1P29218 277 aa13.14□□□□□ -0.31
SMARCA4-206ENST00000538456 CYB561P49447 251 aa13.14□□□□□ -0.31
SMARCA4-206ENST00000538456 MEOX1P50221 254 aa13.14□□□□□ -0.31
SMARCA4-206ENST00000538456 CLCN7P51798 805 aa13.14□□□□□ -0.31
SMARCA4-206ENST00000538456 ITGA8P53708 1063 aa13.14□□□□□ -0.31
SMARCA4-206ENST00000538456 ADARP55265 1226 aaKnown RBP13.14□□□□□ -0.31
SMARCA4-206ENST00000538456 TBPL1P62380 186 aa13.14□□□□□ -0.31
SMARCA4-206ENST00000538456 KCTD19Q17RG1 926 aaPredicted RBP13.14□□□□□ -0.31
SMARCA4-206ENST00000538456 SEL1L2Q5TEA6 688 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms