RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 SLC10A1Q14973 349 aa8.75□□□□□ -1.01
CPSF7-217ENST00000537162 ABRAXAS2Q15018 415 aa8.75□□□□□ -1.01
CPSF7-217ENST00000537162 KLHDC7AQ5VTJ3 777 aa8.75□□□□□ -1.01
CPSF7-217ENST00000537162 NCBP2-AS2Q69YL0 99 aa8.75□□□□□ -1.01
CPSF7-217ENST00000537162 ZNF677Q86XU0 584 aa8.75□□□□□ -1.01
CPSF7-217ENST00000537162 LRRC49Q8IUZ0 686 aa8.75□□□□□ -1.01
CPSF7-217ENST00000537162 LACC1Q8IV20 430 aa8.75□□□□□ -1.01
CPSF7-217ENST00000537162 PSTKQ8IV42 348 aaKnown RBP8.75□□□□□ -1.01
CPSF7-217ENST00000537162 RFLNBQ8N5W9 214 aa8.75□□□□□ -1.01
CPSF7-217ENST00000537162 CSNK1A1LQ8N752 337 aa8.75□□□□□ -1.01
CPSF7-217ENST00000537162 ZNF441Q8N8Z8 693 aa8.75□□□□□ -1.01
CPSF7-217ENST00000537162 FATE1Q969F0 183 aa8.75□□□□□ -1.01
CPSF7-217ENST00000537162 ZUFSPQ96AP4 578 aa8.75□□□□□ -1.01
CPSF7-217ENST00000537162 TSGA13Q96PP4 275 aa8.75□□□□□ -1.01
CPSF7-217ENST00000537162 RBCK1Q9BYM8 510 aa8.75□□□□□ -1.01
CPSF7-217ENST00000537162 DRC3Q9H069 523 aa8.75□□□□□ -1.01
CPSF7-217ENST00000537162 SLC6A15Q9H2J7 730 aa8.75□□□□□ -1.01
CPSF7-217ENST00000537162 PCDH18Q9HCL0 1135 aa8.75□□□□□ -1.01
CPSF7-217ENST00000537162 TIMMDC1Q9NPL8 285 aa8.75□□□□□ -1.01
CPSF7-217ENST00000537162 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.75□□□□□ -1.01
CPSF7-217ENST00000537162 UBP1Q9NZI7 540 aa8.75□□□□□ -1.01
CPSF7-217ENST00000537162 HCN3Q9P1Z3 774 aa8.75□□□□□ -1.01
CPSF7-217ENST00000537162 LAMP3Q9UQV4 416 aa8.75□□□□□ -1.01
CPSF7-217ENST00000537162 EPN1Q9Y6I3 576 aaPredicted RBP8.75□□□□□ -1.01
CPSF7-217ENST00000537162 SCINQ9Y6U3 715 aa8.75□□□□□ -1.01
CPSF7-217ENST00000537162 S1PR4O95977 384 aa8.74□□□□□ -1.01
CPSF7-217ENST00000537162 THBS1P07996 1170 aa8.74□□□□□ -1.01
CPSF7-217ENST00000537162 CD48P09326 243 aa8.74□□□□□ -1.01
CPSF7-217ENST00000537162 OPRM1P35372 400 aa8.74□□□□□ -1.01
CPSF7-217ENST00000537162 XCR1P46094 333 aa8.74□□□□□ -1.01
CPSF7-217ENST00000537162 CPA2P48052 419 aa8.74□□□□□ -1.01
CPSF7-217ENST00000537162 DNASE1L1P49184 302 aa8.74□□□□□ -1.01
CPSF7-217ENST00000537162 OR4D2P58180 307 aa8.74□□□□□ -1.01
CPSF7-217ENST00000537162 ACTG1P63261 375 aa8.74□□□□□ -1.01
CPSF7-217ENST00000537162 FAM27E3Q08E93 113 aa8.74□□□□□ -1.01
CPSF7-217ENST00000537162 SQLEQ14534 574 aa8.74□□□□□ -1.01
CPSF7-217ENST00000537162 NSDHLQ15738 373 aa8.74□□□□□ -1.01
CPSF7-217ENST00000537162 ETFDHQ16134 617 aa8.74□□□□□ -1.01
CPSF7-217ENST00000537162 IFI16Q16666 785 aaKnown RBP8.74□□□□□ -1.01
CPSF7-217ENST00000537162 NDUFAF5Q5TEU4 345 aa8.74□□□□□ -1.01
CPSF7-217ENST00000537162 ZDHHC20Q5W0Z9 365 aa8.74□□□□□ -1.01
CPSF7-217ENST00000537162 ABHD17CQ6PCB6 329 aa8.74□□□□□ -1.01
CPSF7-217ENST00000537162 TMEM156Q8N614 296 aa8.74□□□□□ -1.01
CPSF7-217ENST00000537162 CLDN19Q8N6F1 224 aa8.74□□□□□ -1.01
CPSF7-217ENST00000537162 OR51Q1Q8NH59 317 aa8.74□□□□□ -1.01
CPSF7-217ENST00000537162 DCUN1D1Q96GG9 259 aa8.74□□□□□ -1.01
CPSF7-217ENST00000537162 LIN28AQ9H9Z2 209 aaKnown RBP8.74□□□□□ -1.01
CPSF7-217ENST00000537162 IL1RL2Q9HB29 575 aa8.74□□□□□ -1.01
CPSF7-217ENST00000537162 TUBA8Q9NY65 449 aaPredicted RBP8.74□□□□□ -1.01
CPSF7-217ENST00000537162 FKBPLQ9UIM3 349 aa8.74□□□□□ -1.01
CPSF7-217ENST00000537162 GDF2Q9UK05 429 aaPredicted RBP8.74□□□□□ -1.01
CPSF7-217ENST00000537162 TMEM89A2RUT3 159 aa8.73□□□□□ -1.01
CPSF7-217ENST00000537162 OR2A25A4D2G3 310 aa8.73□□□□□ -1.01
CPSF7-217ENST00000537162 ESPNB1AK53 854 aa8.73□□□□□ -1.01
CPSF7-217ENST00000537162 HCN1O60741 890 aa8.73□□□□□ -1.01
CPSF7-217ENST00000537162 SRP72O76094 671 aaKnown RBP8.73□□□□□ -1.01
CPSF7-217ENST00000537162 NEFLP07196 543 aa8.73□□□□□ -1.01
CPSF7-217ENST00000537162 FREM3P0C091 2139 aa8.73□□□□□ -1.01
CPSF7-217ENST00000537162 RFPL3SP0C7P2 107 aa8.73□□□□□ -1.01
CPSF7-217ENST00000537162 RARAP10276 462 aa8.73□□□□□ -1.01
CPSF7-217ENST00000537162 CCKARP32238 428 aa8.73□□□□□ -1.01
CPSF7-217ENST00000537162 TRPC1P48995 793 aa8.73□□□□□ -1.01
CPSF7-217ENST00000537162 CDKN1CP49918 316 aaPredicted RBP8.73□□□□□ -1.01
CPSF7-217ENST00000537162 RPS4XP62701 263 aaKnown RBP8.73□□□□□ -1.01
CPSF7-217ENST00000537162 XIAPP98170 497 aa8.73□□□□□ -1.01
CPSF7-217ENST00000537162 SLC10A2Q12908 348 aaPredicted RBP8.73□□□□□ -1.01
CPSF7-217ENST00000537162 MAMLD1Q13495 774 aa8.73□□□□□ -1.01
CPSF7-217ENST00000537162 STIM1Q13586 685 aa8.73□□□□□ -1.01
CPSF7-217ENST00000537162 PTK6Q13882 451 aa8.73□□□□□ -1.01
CPSF7-217ENST00000537162 ZNF750Q32MQ0 723 aa8.73□□□□□ -1.01
CPSF7-217ENST00000537162 C8orf34Q49A92 452 aa8.73□□□□□ -1.01
CPSF7-217ENST00000537162 SIRPB2Q5JXA9 342 aa8.73□□□□□ -1.01
CPSF7-217ENST00000537162 CYB5R2Q6BCY4 276 aa8.73□□□□□ -1.01
CPSF7-217ENST00000537162 ZNF550Q7Z398 422 aa8.73□□□□□ -1.01
CPSF7-217ENST00000537162 ELOA2Q8IYF1 753 aaPredicted RBP8.73□□□□□ -1.01
CPSF7-217ENST00000537162 SLC25A41Q8N5S1 370 aa8.73□□□□□ -1.01
CPSF7-217ENST00000537162 C9orf106Q8NAJ2 232 aa8.73□□□□□ -1.01
CPSF7-217ENST00000537162 NFAM1Q8NET5 270 aaPredicted RBP8.73□□□□□ -1.01
CPSF7-217ENST00000537162 OR2L8Q8NGY9 312 aa8.73□□□□□ -1.01
CPSF7-217ENST00000537162 BLOC1S5Q8TDH9 187 aa8.73□□□□□ -1.01
CPSF7-217ENST00000537162 ANKRD9Q96BM1 317 aaPredicted RBP8.73□□□□□ -1.01
CPSF7-217ENST00000537162 ZC3HAV1LQ96H79 300 aaKnown RBP8.73□□□□□ -1.01
CPSF7-217ENST00000537162 CCDC138Q96M89 665 aa8.73□□□□□ -1.01
CPSF7-217ENST00000537162 RBSNQ9H1K0 784 aa8.73□□□□□ -1.01
CPSF7-217ENST00000537162 EML4Q9HC35 981 aaKnown RBP8.73□□□□□ -1.01
CPSF7-217ENST00000537162 MAN1B1Q9UKM7 699 aa8.73□□□□□ -1.01
CPSF7-217ENST00000537162 PCDHGB3Q9Y5G1 929 aa8.73□□□□□ -1.01
CPSF7-217ENST00000537162 KLK4Q9Y5K2 254 aa8.73□□□□□ -1.01
CPSF7-217ENST00000537162 FAM234BA2RU67 622 aa8.72□□□□□ -1.01
CPSF7-217ENST00000537162 MBD3L3A6NE82 208 aaPredicted RBP8.72□□□□□ -1.01
CPSF7-217ENST00000537162 AGAP14A8MT82 685 aa8.72□□□□□ -1.01
CPSF7-217ENST00000537162 AHRRA9YTQ3 701 aa8.72□□□□□ -1.01
CPSF7-217ENST00000537162 PRKNO60260 465 aaPredicted RBP8.72□□□□□ -1.01
CPSF7-217ENST00000537162 ERN1O75460 977 aaKnown RBP8.72□□□□□ -1.01
CPSF7-217ENST00000537162 RNF8O76064 485 aa8.72□□□□□ -1.01
CPSF7-217ENST00000537162 OR6B1O95007 311 aa8.72□□□□□ -1.01
CPSF7-217ENST00000537162 IL18BPO95998 194 aa8.72□□□□□ -1.01
CPSF7-217ENST00000537162 SOD3P08294 240 aa8.72□□□□□ -1.01
CPSF7-217ENST00000537162 CYC1P08574 325 aa8.72□□□□□ -1.01
CPSF7-217ENST00000537162 PRSS56P0CW18 603 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms