RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 LRBAP50851 2863 aa11.82□□□□□ -0.52
PRKDC-207ENST00000536483 DOCK10Q96BY6 2186 aa11.81□□□□□ -0.52
PRKDC-207ENST00000536483 PCM1Q15154 2024 aa11.81□□□□□ -0.52
PRKDC-207ENST00000536483 E2F3O00716 465 aa11.81□□□□□ -0.52
PRKDC-207ENST00000536483 HAT1O14929 419 aa11.81□□□□□ -0.52
PRKDC-207ENST00000536483 PRPF4O43172 522 aaKnown RBP eCLIP11.81□□□□□ -0.52
PRKDC-207ENST00000536483 FOXS1O43638 330 aa11.81□□□□□ -0.52
PRKDC-207ENST00000536483 SLU7O95391 586 aaKnown RBP11.81□□□□□ -0.52
PRKDC-207ENST00000536483 CYC1P08574 325 aa11.81□□□□□ -0.52
PRKDC-207ENST00000536483 GP5P40197 560 aa11.81□□□□□ -0.52
PRKDC-207ENST00000536483 MAGEA4P43358 317 aa11.81□□□□□ -0.52
PRKDC-207ENST00000536483 HNMTP50135 292 aa11.81□□□□□ -0.52
PRKDC-207ENST00000536483 NAB1Q13506 487 aa11.81□□□□□ -0.52
PRKDC-207ENST00000536483 THEMIS2Q5TEJ8 643 aa11.81□□□□□ -0.52
PRKDC-207ENST00000536483 KIRREL2Q6UWL6 708 aa11.81□□□□□ -0.52
PRKDC-207ENST00000536483 C17orf64Q86WR6 236 aa11.81□□□□□ -0.52
PRKDC-207ENST00000536483 CEP97Q8IW35 865 aa11.81□□□□□ -0.52
PRKDC-207ENST00000536483 SRRM1Q8IYB3 904 aaKnown RBP11.81□□□□□ -0.52
PRKDC-207ENST00000536483 METTL27Q8N6F8 245 aaPredicted RBP11.81□□□□□ -0.52
PRKDC-207ENST00000536483 GRHL3Q8TE85 626 aa11.81□□□□□ -0.52
PRKDC-207ENST00000536483 RERGQ96A58 199 aaPredicted RBP11.81□□□□□ -0.52
PRKDC-207ENST00000536483 CNDP1Q96KN2 507 aa11.81□□□□□ -0.52
PRKDC-207ENST00000536483 UBXN10Q96LJ8 280 aa11.81□□□□□ -0.52
PRKDC-207ENST00000536483 OR4K3Q96R72 315 aa11.81□□□□□ -0.52
PRKDC-207ENST00000536483 RBBP8Q99708 897 aa11.81□□□□□ -0.52
PRKDC-207ENST00000536483 LRRC1Q9BTT6 524 aa11.81□□□□□ -0.52
PRKDC-207ENST00000536483 DERL2Q9GZP9 239 aa11.81□□□□□ -0.52
PRKDC-207ENST00000536483 SEMA3GQ9NS98 782 aa11.81□□□□□ -0.52
PRKDC-207ENST00000536483 ARL15Q9NXU5 204 aa11.81□□□□□ -0.52
PRKDC-207ENST00000536483 OSGIN2Q9Y236 505 aa11.81□□□□□ -0.52
PRKDC-207ENST00000536483 MTO1Q9Y2Z2 717 aaKnown RBP11.81□□□□□ -0.52
PRKDC-207ENST00000536483 SVILO95425 2214 aa11.8□□□□□ -0.52
PRKDC-207ENST00000536483 ABCA12Q86UK0 2595 aa11.8□□□□□ -0.52
PRKDC-207ENST00000536483 H0YIG0 161 aa11.8□□□□□ -0.52
PRKDC-207ENST00000536483 EIF2S1P05198 315 aaKnown RBP11.8□□□□□ -0.52
PRKDC-207ENST00000536483 ZGLP1P0C6A0 271 aa11.8□□□□□ -0.52
PRKDC-207ENST00000536483 GGT5P36269 586 aa11.8□□□□□ -0.52
PRKDC-207ENST00000536483 TSFMP43897 325 aaKnown RBP11.8□□□□□ -0.52
PRKDC-207ENST00000536483 OR1D4P47884 311 aa11.8□□□□□ -0.52
PRKDC-207ENST00000536483 PGGT1BP53609 377 aa11.8□□□□□ -0.52
PRKDC-207ENST00000536483 CDC16Q13042 620 aa11.8□□□□□ -0.52
PRKDC-207ENST00000536483 ZNF169Q14929 603 aaPredicted RBP11.8□□□□□ -0.52
PRKDC-207ENST00000536483 HKDC1Q2TB90 917 aa11.8□□□□□ -0.52
PRKDC-207ENST00000536483 GRTP1Q5TC63 336 aa11.8□□□□□ -0.52
PRKDC-207ENST00000536483 IRAK1BP1Q5VVH5 260 aa11.8□□□□□ -0.52
PRKDC-207ENST00000536483 ATG9BQ674R7 924 aa11.8□□□□□ -0.52
PRKDC-207ENST00000536483 MBOAT1Q6ZNC8 495 aa11.8□□□□□ -0.52
PRKDC-207ENST00000536483 ADAMTSL2Q86TH1 951 aa11.8□□□□□ -0.52
PRKDC-207ENST00000536483 DTWD1Q8N5C7 304 aa11.8□□□□□ -0.52
PRKDC-207ENST00000536483 AMER3Q8N944 861 aa11.8□□□□□ -0.52
PRKDC-207ENST00000536483 STT3BQ8TCJ2 826 aa11.8□□□□□ -0.52
PRKDC-207ENST00000536483 ANKRD49Q8WVL7 239 aa11.8□□□□□ -0.52
PRKDC-207ENST00000536483 FAR1Q8WVX9 515 aa11.8□□□□□ -0.52
PRKDC-207ENST00000536483 ZNF592Q92610 1267 aa11.8□□□□□ -0.52
PRKDC-207ENST00000536483 TSPAN17Q96FV3 270 aa11.8□□□□□ -0.52
PRKDC-207ENST00000536483 FUT8Q9BYC5 575 aa11.8□□□□□ -0.52
PRKDC-207ENST00000536483 LHPPQ9H008 270 aa11.8□□□□□ -0.52
PRKDC-207ENST00000536483 ATG10Q9H0Y0 220 aa11.8□□□□□ -0.52
PRKDC-207ENST00000536483 GPAMQ9HCL2 828 aa11.8□□□□□ -0.52
PRKDC-207ENST00000536483 CTSFQ9UBX1 484 aa11.8□□□□□ -0.52
PRKDC-207ENST00000536483 ZNF282Q9UDV7 671 aaPredicted RBP11.8□□□□□ -0.52
PRKDC-207ENST00000536483 SH2B3Q9UQQ2 575 aa11.8□□□□□ -0.52
PRKDC-207ENST00000536483 OARD1Q9Y530 152 aa11.8□□□□□ -0.52
PRKDC-207ENST00000536483 SLC22A7Q9Y694 548 aa11.8□□□□□ -0.52
PRKDC-207ENST00000536483 CROCCQ5TZA2 2017 aa11.8□□□□□ -0.52
PRKDC-207ENST00000536483 HEATR5BQ9P2D3 2071 aa11.8□□□□□ -0.52
PRKDC-207ENST00000536483 CDC7O00311 574 aa11.79□□□□□ -0.52
PRKDC-207ENST00000536483 P2RX6O15547 441 aa11.79□□□□□ -0.52
PRKDC-207ENST00000536483 URI1O94763 535 aaPredicted RBP11.79□□□□□ -0.52
PRKDC-207ENST00000536483 NSA2O95478 260 aaKnown RBP11.79□□□□□ -0.52
PRKDC-207ENST00000536483 EDN3P14138 238 aa11.79□□□□□ -0.52
PRKDC-207ENST00000536483 TNFRSF8P28908 595 aa11.79□□□□□ -0.52
PRKDC-207ENST00000536483 STX2P32856 288 aa11.79□□□□□ -0.52
PRKDC-207ENST00000536483 SPRP35270 261 aaPredicted RBP11.79□□□□□ -0.52
PRKDC-207ENST00000536483 CCR8P51685 355 aa11.79□□□□□ -0.52
PRKDC-207ENST00000536483 ATP6V0D1P61421 351 aa11.79□□□□□ -0.52
PRKDC-207ENST00000536483 OCA2Q04671 838 aa11.79□□□□□ -0.52
PRKDC-207ENST00000536483 Q0VFX4 171 aa11.79□□□□□ -0.52
PRKDC-207ENST00000536483 PWP1Q13610 501 aa11.79□□□□□ -0.52
PRKDC-207ENST00000536483 TSTA3Q13630 321 aaPredicted RBP11.79□□□□□ -0.52
PRKDC-207ENST00000536483 TLR1Q15399 786 aa11.79□□□□□ -0.52
PRKDC-207ENST00000536483 RBBP7Q16576 425 aa11.79□□□□□ -0.52
PRKDC-207ENST00000536483 NDUFA9Q16795 377 aa11.79□□□□□ -0.52
PRKDC-207ENST00000536483 TUBB8Q3ZCM7 444 aa11.79□□□□□ -0.52
PRKDC-207ENST00000536483 GLE1Q53GS7 698 aaKnown RBP11.79□□□□□ -0.52
PRKDC-207ENST00000536483 TMEM214Q6NUQ4 689 aaKnown RBP11.79□□□□□ -0.52
PRKDC-207ENST00000536483 LINC00696Q6ZRV3 163 aa11.79□□□□□ -0.52
PRKDC-207ENST00000536483 ZGRF1Q86YA3 2104 aa11.79□□□□□ -0.52
PRKDC-207ENST00000536483 AFAP1L2Q8N4X5 818 aa11.79□□□□□ -0.52
PRKDC-207ENST00000536483 MFSD9Q8NBP5 474 aa11.79□□□□□ -0.52
PRKDC-207ENST00000536483 CAMKVQ8NCB2 501 aa11.79□□□□□ -0.52
PRKDC-207ENST00000536483 CATSPER1Q8NEC5 780 aa11.79□□□□□ -0.52
PRKDC-207ENST00000536483 OR11G2Q8NGC1 345 aa11.79□□□□□ -0.52
PRKDC-207ENST00000536483 THOC3Q96J01 351 aaKnown RBP11.79□□□□□ -0.52
PRKDC-207ENST00000536483 VPS50Q96JG6 964 aa11.79□□□□□ -0.52
PRKDC-207ENST00000536483 CABS1Q96KC9 395 aa11.79□□□□□ -0.52
PRKDC-207ENST00000536483 MESP1Q9BRJ9 268 aa11.79□□□□□ -0.52
PRKDC-207ENST00000536483 DRC3Q9H069 523 aa11.79□□□□□ -0.52
PRKDC-207ENST00000536483 TSPYL1Q9H0U9 437 aa11.79□□□□□ -0.52
PRKDC-207ENST00000536483 EPS8L2Q9H6S3 715 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms