RNA–Protein interactions for RNA: ENST00000535900.5

UBE3B-205, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-205ENST00000535900 DMTNQ08495 405 aa10.35□□□□□ -0.75
UBE3B-205ENST00000535900 IFT88Q13099 833 aa10.35□□□□□ -0.75
UBE3B-205ENST00000535900 TSTA3Q13630 321 aaPredicted RBP10.35□□□□□ -0.75
UBE3B-205ENST00000535900 SF1Q15637 639 aaKnown RBP10.35□□□□□ -0.75
UBE3B-205ENST00000535900 UGT3A2Q3SY77 523 aa10.35□□□□□ -0.75
UBE3B-205ENST00000535900 LACTB2Q53H82 288 aaPredicted RBP10.35□□□□□ -0.75
UBE3B-205ENST00000535900 LETMD1Q6P1Q0 360 aa10.35□□□□□ -0.75
UBE3B-205ENST00000535900 EPGNQ6UW88 154 aa10.35□□□□□ -0.75
UBE3B-205ENST00000535900 SUSD1Q6UWL2 747 aa10.35□□□□□ -0.75
UBE3B-205ENST00000535900 PPFIBP2Q8ND30 876 aa10.35□□□□□ -0.75
UBE3B-205ENST00000535900 OR2L3Q8NG85 312 aa10.35□□□□□ -0.75
UBE3B-205ENST00000535900 RFWD2Q8NHY2 731 aa10.35□□□□□ -0.75
UBE3B-205ENST00000535900 SNRNP27Q8WVK2 155 aaKnown RBP10.35□□□□□ -0.75
UBE3B-205ENST00000535900 CCT6BQ92526 530 aa10.35□□□□□ -0.75
UBE3B-205ENST00000535900 TTC9Q92623 222 aa10.35□□□□□ -0.75
UBE3B-205ENST00000535900 NEIL2Q969S2 332 aa10.35□□□□□ -0.75
UBE3B-205ENST00000535900 THAP11Q96EK4 314 aa10.35□□□□□ -0.75
UBE3B-205ENST00000535900 ZDHHC12Q96GR4 267 aa10.35□□□□□ -0.75
UBE3B-205ENST00000535900 METTL2AQ96IZ6 378 aaKnown RBP10.35□□□□□ -0.75
UBE3B-205ENST00000535900 CMKLR1Q99788 373 aa10.35□□□□□ -0.75
UBE3B-205ENST00000535900 CCDC28BQ9BUN5 200 aa10.35□□□□□ -0.75
UBE3B-205ENST00000535900 SARGQ9BW04 601 aa10.35□□□□□ -0.75
UBE3B-205ENST00000535900 TMEM120AQ9BXJ8 343 aa10.35□□□□□ -0.75
UBE3B-205ENST00000535900 CHRNA10Q9GZZ6 450 aa10.35□□□□□ -0.75
UBE3B-205ENST00000535900 XKR8Q9H6D3 395 aa10.35□□□□□ -0.75
UBE3B-205ENST00000535900 ZNF395Q9H8N7 513 aaPredicted RBP10.35□□□□□ -0.75
UBE3B-205ENST00000535900 MEAF6Q9HAF1 191 aa10.35□□□□□ -0.75
UBE3B-205ENST00000535900 MRPS30Q9NP92 439 aaKnown RBP10.35□□□□□ -0.75
UBE3B-205ENST00000535900 SAR1AQ9NR31 198 aa10.35□□□□□ -0.75
UBE3B-205ENST00000535900 PNPOQ9NVS9 261 aa10.35□□□□□ -0.75
UBE3B-205ENST00000535900 NMRK1Q9NWW6 199 aa10.35□□□□□ -0.75
UBE3B-205ENST00000535900 HRASLS2Q9NWW9 162 aa10.35□□□□□ -0.75
UBE3B-205ENST00000535900 ACTR10Q9NZ32 417 aa10.35□□□□□ -0.75
UBE3B-205ENST00000535900 AKAP7Q9P0M2 348 aaPredicted RBP10.35□□□□□ -0.75
UBE3B-205ENST00000535900 LRIT1Q9P2V4 623 aa10.35□□□□□ -0.75
UBE3B-205ENST00000535900 TAC3Q9UHF0 121 aa10.35□□□□□ -0.75
UBE3B-205ENST00000535900 DCTN4Q9UJW0 460 aa10.35□□□□□ -0.75
UBE3B-205ENST00000535900 ZNF225Q9UK10 706 aa10.35□□□□□ -0.75
UBE3B-205ENST00000535900 KCNE1BA0A087WTH5 132 aa10.34□□□□□ -0.75
UBE3B-205ENST00000535900 KRT87PA6NCN2 255 aa10.34□□□□□ -0.75
UBE3B-205ENST00000535900 ISM1B1AKI9 464 aa10.34□□□□□ -0.75
UBE3B-205ENST00000535900 E7EQ34 232 aa10.34□□□□□ -0.75
UBE3B-205ENST00000535900 NPIPB8E9PQR5 432 aa10.34□□□□□ -0.75
UBE3B-205ENST00000535900 J3QKU1 62 aa10.34□□□□□ -0.75
UBE3B-205ENST00000535900 FOXE1O00358 373 aaPredicted RBP10.34□□□□□ -0.75
UBE3B-205ENST00000535900 BTN3A3O00478 584 aa10.34□□□□□ -0.75
UBE3B-205ENST00000535900 PPP6CO00743 305 aa10.34□□□□□ -0.75
UBE3B-205ENST00000535900 SLC22A2O15244 555 aa10.34□□□□□ -0.75
UBE3B-205ENST00000535900 DUX1O43812 170 aa10.34□□□□□ -0.75
UBE3B-205ENST00000535900 HNRNPCL1O60812 293 aaKnown RBP10.34□□□□□ -0.75
UBE3B-205ENST00000535900 ATP5HO75947 161 aa10.34□□□□□ -0.75
UBE3B-205ENST00000535900 OR4F21O95013 312 aa10.34□□□□□ -0.75
UBE3B-205ENST00000535900 CAPN1P07384 714 aa10.34□□□□□ -0.75
UBE3B-205ENST00000535900 PIK3CBP42338 1070 aa10.34□□□□□ -0.75
UBE3B-205ENST00000535900 PPM1FP49593 454 aaPredicted RBP10.34□□□□□ -0.75
UBE3B-205ENST00000535900 MAPK10P53779 464 aa10.34□□□□□ -0.75
UBE3B-205ENST00000535900 DOC2AQ14183 400 aa10.34□□□□□ -0.75
UBE3B-205ENST00000535900 SMU1Q2TAY7 513 aa10.34□□□□□ -0.75
UBE3B-205ENST00000535900 AMZ1Q400G9 498 aa10.34□□□□□ -0.75
UBE3B-205ENST00000535900 GALNTL6Q49A17 601 aa10.34□□□□□ -0.75
UBE3B-205ENST00000535900 FRG2Q64ET8 278 aa10.34□□□□□ -0.75
UBE3B-205ENST00000535900 MED27Q6P2C8 311 aa10.34□□□□□ -0.75
UBE3B-205ENST00000535900 SPESP1Q6UW49 350 aa10.34□□□□□ -0.75
UBE3B-205ENST00000535900 CCDC121Q6ZUS5 278 aa10.34□□□□□ -0.75
UBE3B-205ENST00000535900 ACAD11Q709F0 780 aa10.34□□□□□ -0.75
UBE3B-205ENST00000535900 RPS27LQ71UM5 84 aaKnown RBP10.34□□□□□ -0.75
UBE3B-205ENST00000535900 TRIM46Q7Z4K8 759 aa10.34□□□□□ -0.75
UBE3B-205ENST00000535900 TMPRSS11BQ86T26 416 aa10.34□□□□□ -0.75
UBE3B-205ENST00000535900 FAM129CQ86XR2 697 aa10.34□□□□□ -0.75
UBE3B-205ENST00000535900 PLXDC1Q8IUK5 500 aa10.34□□□□□ -0.75
UBE3B-205ENST00000535900 SFTPA2Q8IWL1 248 aa10.34□□□□□ -0.75
UBE3B-205ENST00000535900 PARP9Q8IXQ6 854 aa10.34□□□□□ -0.75
UBE3B-205ENST00000535900 LAS2Q8IYD9 372 aa10.34□□□□□ -0.75
UBE3B-205ENST00000535900 CDYL2Q8N8U2 506 aa10.34□□□□□ -0.75
UBE3B-205ENST00000535900 ACTRT2Q8TDY3 377 aa10.34□□□□□ -0.75
UBE3B-205ENST00000535900 USP7Q93009 1102 aa10.34□□□□□ -0.75
UBE3B-205ENST00000535900 MOCOSQ96EN8 888 aa10.34□□□□□ -0.75
UBE3B-205ENST00000535900 FRG2BQ96QU4 278 aa10.34□□□□□ -0.75
UBE3B-205ENST00000535900 OR2A14Q96R47 310 aa10.34□□□□□ -0.75
UBE3B-205ENST00000535900 SEMA4CQ9C0C4 833 aa10.34□□□□□ -0.75
UBE3B-205ENST00000535900 ELOVL6Q9H5J4 265 aa10.34□□□□□ -0.75
UBE3B-205ENST00000535900 BRF2Q9HAW0 419 aa10.34□□□□□ -0.75
UBE3B-205ENST00000535900 RIC8BQ9NVN3 520 aa10.34□□□□□ -0.75
UBE3B-205ENST00000535900 GEMIN8Q9NWZ8 242 aaKnown RBP10.34□□□□□ -0.75
UBE3B-205ENST00000535900 CIDEBQ9UHD4 219 aa10.34□□□□□ -0.75
UBE3B-205ENST00000535900 POMT2Q9UKY4 750 aa10.34□□□□□ -0.75
UBE3B-205ENST00000535900 TRIM33Q9UPN9 1127 aa10.34□□□□□ -0.75
UBE3B-205ENST00000535900 RNF11Q9Y3C5 154 aa10.34□□□□□ -0.75
UBE3B-205ENST00000535900 DNAJC15Q9Y5T4 150 aa10.34□□□□□ -0.75
UBE3B-205ENST00000535900 UNC13CQ8NB66 2214 aa10.34□□□□□ -0.75
UBE3B-205ENST00000535900 PRAMEF33A0A0G2JMD5 474 aa10.33□□□□□ -0.76
UBE3B-205ENST00000535900 GOLGA8QA0A0J9YX86 632 aa10.33□□□□□ -0.76
UBE3B-205ENST00000535900 A0A0J9YY10 115 aa10.33□□□□□ -0.76
UBE3B-205ENST00000535900 TRBC2A0A5B9 178 aa10.33□□□□□ -0.76
UBE3B-205ENST00000535900 GSAPA4D1B5 854 aa10.33□□□□□ -0.76
UBE3B-205ENST00000535900 GOLGA8OA6NCC3 632 aa10.33□□□□□ -0.76
UBE3B-205ENST00000535900 GOLGA8NF8WBI6 632 aa10.33□□□□□ -0.76
UBE3B-205ENST00000535900 SLC28A1O00337 649 aa10.33□□□□□ -0.76
UBE3B-205ENST00000535900 MANBAO00462 879 aa10.33□□□□□ -0.76
UBE3B-205ENST00000535900 TOX3O15405 576 aaPredicted RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms