RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 PSMC3P17980 439 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 TCEA1P23193 301 aaKnown RBP3.12□□□□□ -1.91
SNHG1-202ENST00000535689 ANOS1P23352 680 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 HRH2P25021 359 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 AXLP30530 894 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 ATXN3P54252 364 aaPredicted RBP3.12□□□□□ -1.91
SNHG1-202ENST00000535689 IFI35P80217 286 aaPredicted RBP3.12□□□□□ -1.91
SNHG1-202ENST00000535689 BECN1Q14457 450 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 RASA2Q15283 850 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 CCDC6Q16204 474 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 ODF3L2Q3SX64 289 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 MCMDC2Q4G0Z9 681 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 FAM98BQ52LJ0 330 aaKnown RBP3.12□□□□□ -1.91
SNHG1-202ENST00000535689 CCDC184Q52MB2 194 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 SPDYCQ5MJ68 293 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 CYP4A22Q5TCH4 519 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 ZNF324BQ6AW86 544 aaPredicted RBP3.12□□□□□ -1.91
SNHG1-202ENST00000535689 KLC3Q6P597 504 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 ZNF534Q76KX8 674 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 DET1Q7L5Y6 550 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 PHLDB2Q86SQ0 1253 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 FAM228AQ86W67 206 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 TMEM173Q86WV6 379 aaPredicted RBP3.12□□□□□ -1.91
SNHG1-202ENST00000535689 RALGPS2Q86X27 583 aaPredicted RBP3.12□□□□□ -1.91
SNHG1-202ENST00000535689 NRROSQ86YC3 692 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 MFN1Q8IWA4 741 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 C1orf87Q8N0U7 546 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 RYBPQ8N488 228 aaPredicted RBP3.12□□□□□ -1.91
SNHG1-202ENST00000535689 LEMD2Q8NC56 503 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 DMBX1Q8NFW5 382 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 RND1Q92730 232 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 FGF13Q92913 245 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 FGF14Q92915 247 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 CD101Q93033 1021 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 ERP27Q96DN0 273 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 HES6Q96HZ4 224 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 PPP1R13BQ96KQ4 1090 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 PAFAH2Q99487 392 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 SRSF8Q9BRL6 282 aaKnown RBP3.12□□□□□ -1.91
SNHG1-202ENST00000535689 PI4K2AQ9BTU6 479 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 EDEM2Q9BV94 578 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 AP1M1Q9BXS5 423 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 MTMR12Q9C0I1 747 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 MIS12Q9H081 205 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 KCNN2Q9H2S1 579 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 RETREG1Q9H6L5 497 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 DDX31Q9H8H2 851 aaKnown RBP3.12□□□□□ -1.91
SNHG1-202ENST00000535689 PSTPIP2Q9H939 334 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 SEBOXQ9HB31 216 aaPredicted RBP3.12□□□□□ -1.91
SNHG1-202ENST00000535689 ZBTB20Q9HC78 741 aaPredicted RBP3.12□□□□□ -1.91
SNHG1-202ENST00000535689 ZNF334Q9HCZ1 680 aaPredicted RBP3.12□□□□□ -1.91
SNHG1-202ENST00000535689 ZNF302Q9NR11 478 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 HEBP1Q9NRV9 189 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 TBC1D13Q9NVG8 400 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 TAS2R14Q9NYV8 317 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 SLC24A2Q9UI40 661 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 NDRG2Q9UN36 371 aaKnown RBP3.12□□□□□ -1.91
SNHG1-202ENST00000535689 DLGAP4Q9Y2H0 992 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 PTRH2Q9Y3E5 179 aaKnown RBP3.12□□□□□ -1.91
SNHG1-202ENST00000535689 MTF2Q9Y483 593 aaPredicted RBP3.12□□□□□ -1.91
SNHG1-202ENST00000535689 MAGED1Q9Y5V3 778 aaPredicted RBP3.12□□□□□ -1.91
SNHG1-202ENST00000535689 MAST4O15021 2626 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 IGSF10Q6WRI0 2623 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 ZMYM6O95789 1325 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 GOLGA4Q13439 2230 aaKnown RBP3.12□□□□□ -1.91
SNHG1-202ENST00000535689 ZFYVE26Q68DK2 2539 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 PIEZO2Q9H5I5 2752 aa3.12□□□□□ -1.91
SNHG1-202ENST00000535689 SPEGQ15772 3267 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 ABCA7Q8IZY2 2146 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 TICRRQ7Z2Z1 1910 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 EML5Q05BV3 1969 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 ITPR1Q14643 2758 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 IGKV6D-21A0A0A0MT36 114 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 FAM172BPA6NC97 362 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 SHISA7A6NL88 538 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 C16orf97H3BN30 126 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 CLIC2O15247 247 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 CHADO15335 359 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 P4HA2O15460 535 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 RRP8O43159 456 aaKnown RBP3.11□□□□□ -1.91
SNHG1-202ENST00000535689 PAPSS1O43252 624 aaPredicted RBP3.11□□□□□ -1.91
SNHG1-202ENST00000535689 MED24O75448 989 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 TADA2AO75478 443 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 ZBTB11O95625 1053 aaPredicted RBP3.11□□□□□ -1.91
SNHG1-202ENST00000535689 FGF19O95750 216 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 TFAP2AP05549 437 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 CDH1P12830 882 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 TDGF1P13385 188 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 DARSP14868 501 aaKnown RBP3.11□□□□□ -1.91
SNHG1-202ENST00000535689 ZNF12P17014 697 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 AMD1P17707 334 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 GM2AP17900 193 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 TRIM21P19474 475 aaKnown RBP3.11□□□□□ -1.91
SNHG1-202ENST00000535689 IL11P20809 199 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 DGKAP23743 735 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 CORO1AP31146 461 aaKnown RBP3.11□□□□□ -1.91
SNHG1-202ENST00000535689 OR1G1P47890 313 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 LINC00205P59089 165 aa3.11□□□□□ -1.91
SNHG1-202ENST00000535689 RPL36AP83881 106 aaKnown RBP3.11□□□□□ -1.91
SNHG1-202ENST00000535689 BNC1Q01954 994 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms