RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 IGHV4-30-2A0A087WSY4 118 aa4.14□□□□□ -1.75
PRKDC-205ENST00000535375 SRSF10O75494 262 aaKnown RBP4.14□□□□□ -1.75
PRKDC-205ENST00000535375 DNTTP04053 509 aa4.14□□□□□ -1.75
PRKDC-205ENST00000535375 F3P13726 295 aa4.14□□□□□ -1.75
PRKDC-205ENST00000535375 PSMA3P25788 255 aa4.14□□□□□ -1.75
PRKDC-205ENST00000535375 PIK3R1P27986 724 aa4.14□□□□□ -1.75
PRKDC-205ENST00000535375 KRT20P35900 424 aa4.14□□□□□ -1.75
PRKDC-205ENST00000535375 SULT2A1Q06520 285 aa4.14□□□□□ -1.75
PRKDC-205ENST00000535375 MZT1Q08AG7 82 aa4.14□□□□□ -1.75
PRKDC-205ENST00000535375 CAMK2DQ13557 499 aa4.14□□□□□ -1.75
PRKDC-205ENST00000535375 ALDH1L2Q3SY69 923 aa4.14□□□□□ -1.75
PRKDC-205ENST00000535375 TTC27Q6P3X3 843 aa4.14□□□□□ -1.75
PRKDC-205ENST00000535375 FUT10Q6P4F1 479 aa4.14□□□□□ -1.75
PRKDC-205ENST00000535375 C3P1Q6ZMU1 363 aa4.14□□□□□ -1.75
PRKDC-205ENST00000535375 SH2D6Q7Z4S9 175 aa4.14□□□□□ -1.75
PRKDC-205ENST00000535375 SLC26A7Q8TE54 656 aa4.14□□□□□ -1.75
PRKDC-205ENST00000535375 RMDN2Q96LZ7 410 aa4.14□□□□□ -1.75
PRKDC-205ENST00000535375 CHCHD5Q9BSY4 110 aa4.14□□□□□ -1.75
PRKDC-205ENST00000535375 SLC25A23Q9BV35 468 aa4.14□□□□□ -1.75
PRKDC-205ENST00000535375 PARLQ9H300 379 aa4.14□□□□□ -1.75
PRKDC-205ENST00000535375 TUBB1Q9H4B7 451 aa4.14□□□□□ -1.75
PRKDC-205ENST00000535375 HEXA-AS1Q9H8Q6 139 aa4.14□□□□□ -1.75
PRKDC-205ENST00000535375 CTSZQ9UBR2 303 aa4.14□□□□□ -1.75
PRKDC-205ENST00000535375 ACOD1A6NK06 481 aa4.13□□□□□ -1.75
PRKDC-205ENST00000535375 C17orf105B2RV13 164 aa4.13□□□□□ -1.75
PRKDC-205ENST00000535375 UBE2CO00762 179 aa4.13□□□□□ -1.75
PRKDC-205ENST00000535375 YES1P07947 543 aa4.13□□□□□ -1.75
PRKDC-205ENST00000535375 CDC25CP30307 473 aa4.13□□□□□ -1.75
PRKDC-205ENST00000535375 PPP5CP53041 499 aa4.13□□□□□ -1.75
PRKDC-205ENST00000535375 ERVK-16P61578 105 aa4.13□□□□□ -1.75
PRKDC-205ENST00000535375 CD300CQ08708 224 aa4.13□□□□□ -1.75
PRKDC-205ENST00000535375 COG2Q14746 738 aa4.13□□□□□ -1.75
PRKDC-205ENST00000535375 DUSP5Q16690 384 aa4.13□□□□□ -1.75
PRKDC-205ENST00000535375 FAM133BQ5BKY9 247 aaKnown RBP4.13□□□□□ -1.75
PRKDC-205ENST00000535375 LRRC73Q5JTD7 316 aa4.13□□□□□ -1.75
PRKDC-205ENST00000535375 SLC25A30Q5SVS4 291 aa4.13□□□□□ -1.75
PRKDC-205ENST00000535375 RPUSD3Q6P087 351 aaKnown RBP4.13□□□□□ -1.75
PRKDC-205ENST00000535375 PPP1R21Q6ZMI0 780 aa4.13□□□□□ -1.75
PRKDC-205ENST00000535375 ADCK2Q7Z695 626 aa4.13□□□□□ -1.75
PRKDC-205ENST00000535375 SLC47A2Q86VL8 602 aa4.13□□□□□ -1.75
PRKDC-205ENST00000535375 TOMM40LQ969M1 308 aa4.13□□□□□ -1.75
PRKDC-205ENST00000535375 PSMB7Q99436 277 aa4.13□□□□□ -1.75
PRKDC-205ENST00000535375 IL12RB2Q99665 862 aa4.13□□□□□ -1.75
PRKDC-205ENST00000535375 PI4K2AQ9BTU6 479 aa4.13□□□□□ -1.75
PRKDC-205ENST00000535375 DNAI2Q9GZS0 605 aa4.13□□□□□ -1.75
PRKDC-205ENST00000535375 FZD8Q9H461 694 aa4.13□□□□□ -1.75
PRKDC-205ENST00000535375 GTSE1Q9NYZ3 720 aa4.13□□□□□ -1.75
PRKDC-205ENST00000535375 NFKBIL1Q9UBC1 381 aaPredicted RBP4.13□□□□□ -1.75
PRKDC-205ENST00000535375 FBXL4Q9UKA2 621 aa4.13□□□□□ -1.75
PRKDC-205ENST00000535375 COLEC10Q9Y6Z7 277 aa4.13□□□□□ -1.75
PRKDC-205ENST00000535375 TP53BP1Q12888 1972 aaPredicted RBP4.13□□□□□ -1.75
PRKDC-205ENST00000535375 ARID2Q68CP9 1835 aa4.12□□□□□ -1.75
PRKDC-205ENST00000535375 IGKV6D-41A0A0C4DH26 115 aa4.12□□□□□ -1.75
PRKDC-205ENST00000535375 MTMR11A4FU01 709 aa4.12□□□□□ -1.75
PRKDC-205ENST00000535375 A8MVM7 634 aa4.12□□□□□ -1.75
PRKDC-205ENST00000535375 TRAFD1O14545 582 aaPredicted RBP4.12□□□□□ -1.75
PRKDC-205ENST00000535375 CCDC175P0C221 793 aa4.12□□□□□ -1.75
PRKDC-205ENST00000535375 MYOGP15173 224 aa4.12□□□□□ -1.75
PRKDC-205ENST00000535375 ITIH1P19827 911 aa4.12□□□□□ -1.75
PRKDC-205ENST00000535375 OR1D5P58170 312 aa4.12□□□□□ -1.75
PRKDC-205ENST00000535375 FAM106AQ4KMX7 169 aa4.12□□□□□ -1.75
PRKDC-205ENST00000535375 ZNF841Q6ZN19 808 aa4.12□□□□□ -1.75
PRKDC-205ENST00000535375 C11orf57Q6ZUT1 292 aaPredicted RBP4.12□□□□□ -1.75
PRKDC-205ENST00000535375 CPEB2Q7Z5Q1 589 aaKnown RBP4.12□□□□□ -1.75
PRKDC-205ENST00000535375 RNF130Q86XS8 419 aa4.12□□□□□ -1.75
PRKDC-205ENST00000535375 NKAIN3Q8N8D7 197 aa4.12□□□□□ -1.75
PRKDC-205ENST00000535375 RPLP0P6Q8NHW5 317 aa4.12□□□□□ -1.75
PRKDC-205ENST00000535375 VPS33AQ96AX1 596 aa4.12□□□□□ -1.75
PRKDC-205ENST00000535375 NXPE2Q96DL1 559 aa4.12□□□□□ -1.75
PRKDC-205ENST00000535375 NEDD4LQ96PU5 975 aa4.12□□□□□ -1.75
PRKDC-205ENST00000535375 NAA11Q9BSU3 229 aaPredicted RBP4.12□□□□□ -1.75
PRKDC-205ENST00000535375 POLKQ9UBT6 870 aa4.12□□□□□ -1.75
PRKDC-205ENST00000535375 PILRBQ9UKJ0 227 aa4.12□□□□□ -1.75
PRKDC-205ENST00000535375 POMT2Q9UKY4 750 aa4.12□□□□□ -1.75
PRKDC-205ENST00000535375 TDRD15B5MCY1 1934 aaKnown RBP4.12□□□□□ -1.75
PRKDC-205ENST00000535375 RNF123Q5XPI4 1314 aa4.12□□□□□ -1.75
PRKDC-205ENST00000535375 A0A087WZ39 114 aa4.11□□□□□ -1.75
PRKDC-205ENST00000535375 hCG_38984A0A1B0GV85 526 aa4.11□□□□□ -1.75
PRKDC-205ENST00000535375 MTRF1O75570 445 aaKnown RBP4.11□□□□□ -1.75
PRKDC-205ENST00000535375 PKLRP30613 574 aa4.11□□□□□ -1.75
PRKDC-205ENST00000535375 RGS7P49802 495 aa4.11□□□□□ -1.75
PRKDC-205ENST00000535375 SPECC1Q5M775 1068 aa4.11□□□□□ -1.75
PRKDC-205ENST00000535375 NRARPQ7Z6K4 114 aa4.11□□□□□ -1.75
PRKDC-205ENST00000535375 PIGWQ7Z7B1 504 aa4.11□□□□□ -1.75
PRKDC-205ENST00000535375 SLC25A42Q86VD7 318 aa4.11□□□□□ -1.75
PRKDC-205ENST00000535375 OR4N5Q8IXE1 308 aa4.11□□□□□ -1.75
PRKDC-205ENST00000535375 PRSS35Q8N3Z0 413 aa4.11□□□□□ -1.75
PRKDC-205ENST00000535375 GRK7Q8WTQ7 553 aa4.11□□□□□ -1.75
PRKDC-205ENST00000535375 CNDP2Q96KP4 475 aaKnown RBP4.11□□□□□ -1.75
PRKDC-205ENST00000535375 ZNF597Q96LX8 424 aa4.11□□□□□ -1.75
PRKDC-205ENST00000535375 GDAP1L1Q96MZ0 367 aa4.11□□□□□ -1.75
PRKDC-205ENST00000535375 ATF6BQ99941 703 aa4.11□□□□□ -1.75
PRKDC-205ENST00000535375 KATNB1Q9BVA0 655 aa4.11□□□□□ -1.75
PRKDC-205ENST00000535375 FAM120CQ9NX05 1096 aaKnown RBP4.11□□□□□ -1.75
PRKDC-205ENST00000535375 C5AR2Q9P296 337 aa4.11□□□□□ -1.75
PRKDC-205ENST00000535375 THAP10Q9P2Z0 257 aaPredicted RBP4.11□□□□□ -1.75
PRKDC-205ENST00000535375 GIMAP2Q9UG22 337 aa4.11□□□□□ -1.75
PRKDC-205ENST00000535375 SNX7Q9UNH6 387 aa4.11□□□□□ -1.75
PRKDC-205ENST00000535375 IGLV4-3A0A075B6K6 122 aa4.1□□□□□ -1.75
PRKDC-205ENST00000535375 A8MXE2 369 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms