RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 EIF3KQ9UBQ5 218 aaKnown RBP17.63■□□□□ 0.41
SFSWAP-203ENST00000535236 MAU2Q9Y6X3 613 aa17.63■□□□□ 0.41
SFSWAP-203ENST00000535236 TCRBV7S3A2A0A539 114 aa17.63■□□□□ 0.41
SFSWAP-203ENST00000535236 CLPXO76031 633 aa17.63■□□□□ 0.41
SFSWAP-203ENST00000535236 PRKD3O94806 890 aa17.63■□□□□ 0.41
SFSWAP-203ENST00000535236 OR2T5Q6IEZ7 315 aa17.63■□□□□ 0.41
SFSWAP-203ENST00000535236 OR2T29Q8NH02 315 aa17.63■□□□□ 0.41
SFSWAP-203ENST00000535236 ORAI3Q9BRQ5 295 aa17.63■□□□□ 0.41
SFSWAP-203ENST00000535236 SLC6A15Q9H2J7 730 aa17.63■□□□□ 0.41
SFSWAP-203ENST00000535236 PLEKHA6Q9Y2H5 1048 aa17.63■□□□□ 0.41
SFSWAP-203ENST00000535236 TEX13CA0A0J9YWL9 993 aa17.62■□□□□ 0.41
SFSWAP-203ENST00000535236 ACOX3O15254 700 aa17.62■□□□□ 0.41
SFSWAP-203ENST00000535236 ENTPD6O75354 484 aa17.62■□□□□ 0.41
SFSWAP-203ENST00000535236 RAB36O95755 333 aa17.62■□□□□ 0.41
SFSWAP-203ENST00000535236 RPL26P61254 145 aaKnown RBP17.62■□□□□ 0.41
SFSWAP-203ENST00000535236 DLK2Q6UY11 383 aa17.62■□□□□ 0.41
SFSWAP-203ENST00000535236 OSTM1Q86WC4 334 aa17.62■□□□□ 0.41
SFSWAP-203ENST00000535236 C15orf40Q8WUR7 153 aa17.62■□□□□ 0.41
SFSWAP-203ENST00000535236 ADGRB2O60241 1585 aa17.62■□□□□ 0.41
SFSWAP-203ENST00000535236 J3QLW9 94 aa17.62■□□□□ 0.41
SFSWAP-203ENST00000535236 KLF8O95600 359 aaPredicted RBP17.62■□□□□ 0.41
SFSWAP-203ENST00000535236 ZNF19P17023 458 aa17.62■□□□□ 0.41
SFSWAP-203ENST00000535236 POLR2CP19387 275 aaPredicted RBP17.62■□□□□ 0.41
SFSWAP-203ENST00000535236 CREB5Q02930 508 aa17.62■□□□□ 0.41
SFSWAP-203ENST00000535236 MAD2L1BPQ15013 274 aaPredicted RBP17.62■□□□□ 0.41
SFSWAP-203ENST00000535236 GPRC6AQ5T6X5 926 aa17.62■□□□□ 0.41
SFSWAP-203ENST00000535236 TTYH2Q9BSA4 534 aa17.62■□□□□ 0.41
SFSWAP-203ENST00000535236 NPLQ9BXD5 320 aaPredicted RBP17.62■□□□□ 0.41
SFSWAP-203ENST00000535236 OR8D2Q9GZM6 311 aa17.62■□□□□ 0.41
SFSWAP-203ENST00000535236 DERL2Q9GZP9 239 aa17.62■□□□□ 0.41
SFSWAP-203ENST00000535236 TMEM248Q9NWD8 314 aa17.62■□□□□ 0.41
SFSWAP-203ENST00000535236 MAFFQ9ULX9 164 aa17.62■□□□□ 0.41
SFSWAP-203ENST00000535236 H0YJX3 145 aa17.62■□□□□ 0.41
SFSWAP-203ENST00000535236 TOR1BO14657 336 aa17.62■□□□□ 0.41
SFSWAP-203ENST00000535236 LDB2O43679 373 aa17.62■□□□□ 0.41
SFSWAP-203ENST00000535236 VEGFDO43915 354 aa17.62■□□□□ 0.41
SFSWAP-203ENST00000535236 F7P08709 466 aaPredicted RBP17.62■□□□□ 0.41
SFSWAP-203ENST00000535236 NPTX1Q15818 432 aa17.62■□□□□ 0.41
SFSWAP-203ENST00000535236 NIPAL1Q6NVV3 410 aa17.62■□□□□ 0.41
SFSWAP-203ENST00000535236 NOXRED1Q6NXP6 359 aa17.62■□□□□ 0.41
SFSWAP-203ENST00000535236 SLC2A7Q6PXP3 512 aa17.62■□□□□ 0.41
SFSWAP-203ENST00000535236 CTU1Q7Z7A3 348 aaKnown RBP17.62■□□□□ 0.41
SFSWAP-203ENST00000535236 CLDN19Q8N6F1 224 aa17.62■□□□□ 0.41
SFSWAP-203ENST00000535236 ZSCAN1Q8NBB4 408 aa17.62■□□□□ 0.41
SFSWAP-203ENST00000535236 TUBGCP5Q96RT8 1024 aa17.62■□□□□ 0.41
SFSWAP-203ENST00000535236 MND1Q9BWT6 205 aa17.62■□□□□ 0.41
SFSWAP-203ENST00000535236 GMEB1Q9Y692 573 aa17.62■□□□□ 0.41
SFSWAP-203ENST00000535236 UNCXA6NJT0 531 aa17.62■□□□□ 0.41
SFSWAP-203ENST00000535236 ITM2AO43736 263 aa17.62■□□□□ 0.41
SFSWAP-203ENST00000535236 SYNGR4O95473 234 aa17.62■□□□□ 0.41
SFSWAP-203ENST00000535236 SCGB1D2O95969 90 aa17.62■□□□□ 0.41
SFSWAP-203ENST00000535236 ZNF806P0C7X5 589 aa17.62■□□□□ 0.41
SFSWAP-203ENST00000535236 GDF5P43026 501 aa17.62■□□□□ 0.41
SFSWAP-203ENST00000535236 SERINC3Q13530 473 aa17.62■□□□□ 0.41
SFSWAP-203ENST00000535236 HSDL2Q6YN16 418 aa17.62■□□□□ 0.41
SFSWAP-203ENST00000535236 INO80EQ8NBZ0 244 aaPredicted RBP17.62■□□□□ 0.41
SFSWAP-203ENST00000535236 RBP7Q96R05 134 aa17.62■□□□□ 0.41
SFSWAP-203ENST00000535236 FAM120CQ9NX05 1096 aaKnown RBP17.62■□□□□ 0.41
SFSWAP-203ENST00000535236 A0A1B0GVI7 797 aa17.61■□□□□ 0.41
SFSWAP-203ENST00000535236 EBLN1P0CF75 366 aa17.61■□□□□ 0.41
SFSWAP-203ENST00000535236 SLC3A1Q07837 685 aa17.61■□□□□ 0.41
SFSWAP-203ENST00000535236 RAB39AQ14964 217 aa17.61■□□□□ 0.41
SFSWAP-203ENST00000535236 TULP2O00295 520 aa17.61■□□□□ 0.41
SFSWAP-203ENST00000535236 PVALBP20472 110 aaPredicted RBP17.61■□□□□ 0.41
SFSWAP-203ENST00000535236 SHMT2P34897 504 aa17.61■□□□□ 0.41
SFSWAP-203ENST00000535236 AP2S1P53680 142 aaPredicted RBP17.61■□□□□ 0.41
SFSWAP-203ENST00000535236 ELOAQ14241 798 aaKnown RBP17.61■□□□□ 0.41
SFSWAP-203ENST00000535236 SPATC1Q76KD6 591 aa17.61■□□□□ 0.41
SFSWAP-203ENST00000535236 SLC35F5Q8WV83 523 aa17.61■□□□□ 0.41
SFSWAP-203ENST00000535236 ASB9Q96DX5 294 aa17.61■□□□□ 0.41
SFSWAP-203ENST00000535236 MAPKAP1Q9BPZ7 522 aa17.61■□□□□ 0.41
SFSWAP-203ENST00000535236 HTR3EA5X5Y0 456 aa17.61■□□□□ 0.41
SFSWAP-203ENST00000535236 M0QX08 132 aa17.61■□□□□ 0.41
SFSWAP-203ENST00000535236 ARL6IP5O75915 188 aa17.61■□□□□ 0.41
SFSWAP-203ENST00000535236 CH25HO95992 272 aa17.61■□□□□ 0.41
SFSWAP-203ENST00000535236 GALTP07902 379 aa17.61■□□□□ 0.41
SFSWAP-203ENST00000535236 SLC2A2P11168 524 aaPredicted RBP17.61■□□□□ 0.41
SFSWAP-203ENST00000535236 ZNF630Q2M218 657 aaPredicted RBP17.61■□□□□ 0.41
SFSWAP-203ENST00000535236 CWF19L1Q69YN2 538 aaKnown RBP17.61■□□□□ 0.41
SFSWAP-203ENST00000535236 FAM86B1Q8N7N1 296 aa17.61■□□□□ 0.41
SFSWAP-203ENST00000535236 ENY2Q9NPA8 101 aa17.61■□□□□ 0.41
SFSWAP-203ENST00000535236 CD320Q9NPF0 282 aa17.61■□□□□ 0.41
SFSWAP-203ENST00000535236 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.61■□□□□ 0.41
SFSWAP-203ENST00000535236 B4GALT6Q9UBX8 382 aa17.61■□□□□ 0.41
SFSWAP-203ENST00000535236 GNG8Q9UK08 70 aa17.61■□□□□ 0.41
SFSWAP-203ENST00000535236 FAM159BA6NKW6 160 aa17.61■□□□□ 0.41
SFSWAP-203ENST00000535236 SLC33A1O00400 549 aaPredicted RBP17.61■□□□□ 0.41
SFSWAP-203ENST00000535236 HSPA12AO43301 675 aa17.61■□□□□ 0.41
SFSWAP-203ENST00000535236 AHSGP02765 367 aa17.61■□□□□ 0.41
SFSWAP-203ENST00000535236 ZC3HC1Q86WB0 502 aaKnown RBP17.61■□□□□ 0.41
SFSWAP-203ENST00000535236 ZNF227Q86WZ6 799 aa17.61■□□□□ 0.41
SFSWAP-203ENST00000535236 P2RY13Q9BPV8 354 aa17.61■□□□□ 0.41
SFSWAP-203ENST00000535236 CYP8B1Q9UNU6 501 aa17.61■□□□□ 0.41
SFSWAP-203ENST00000535236 ZSCAN5BA6NJL1 495 aa17.61■□□□□ 0.41
SFSWAP-203ENST00000535236 PRAMEF11O60813 436 aa17.61■□□□□ 0.41
SFSWAP-203ENST00000535236 ATF6P18850 670 aa17.61■□□□□ 0.41
SFSWAP-203ENST00000535236 ZNF267Q14586 743 aaPredicted RBP17.61■□□□□ 0.41
SFSWAP-203ENST00000535236 PAFAH1B3Q15102 231 aaKnown RBP17.61■□□□□ 0.41
SFSWAP-203ENST00000535236 TICAM1Q8IUC6 712 aa17.61■□□□□ 0.41
SFSWAP-203ENST00000535236 NPAS3Q8IXF0 933 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms