RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 KCNK6Q9Y257 313 aa12.87□□□□□ -0.35
BEST1-208ENST00000534553 WDR37Q9Y2I8 494 aa12.87□□□□□ -0.35
BEST1-208ENST00000534553 HS3ST3A1Q9Y663 406 aa12.87□□□□□ -0.35
BEST1-208ENST00000534553 F5P12259 2224 aa12.86□□□□□ -0.35
BEST1-208ENST00000534553 A0A1W2PPV9 198 aa12.86□□□□□ -0.35
BEST1-208ENST00000534553 LATO43561 262 aa12.86□□□□□ -0.35
BEST1-208ENST00000534553 IGLV3-19P01714 112 aa12.86□□□□□ -0.35
BEST1-208ENST00000534553 PIM1P11309 404 aaPredicted RBP12.86□□□□□ -0.35
BEST1-208ENST00000534553 SRFP11831 508 aa12.86□□□□□ -0.35
BEST1-208ENST00000534553 NCK1P16333 377 aa12.86□□□□□ -0.35
BEST1-208ENST00000534553 GPX2P18283 190 aa12.86□□□□□ -0.35
BEST1-208ENST00000534553 GRK3P35626 688 aa12.86□□□□□ -0.35
BEST1-208ENST00000534553 DGKEP52429 567 aa12.86□□□□□ -0.35
BEST1-208ENST00000534553 WNT3P56703 355 aa12.86□□□□□ -0.35
BEST1-208ENST00000534553 CHRNB3Q05901 458 aa12.86□□□□□ -0.35
BEST1-208ENST00000534553 PRDX1Q06830 199 aaKnown RBP12.86□□□□□ -0.35
BEST1-208ENST00000534553 PDE7AQ13946 482 aa12.86□□□□□ -0.35
BEST1-208ENST00000534553 RBBP5Q15291 538 aaKnown RBP12.86□□□□□ -0.35
BEST1-208ENST00000534553 MLF2Q15773 248 aaPredicted RBP12.86□□□□□ -0.35
BEST1-208ENST00000534553 ATP6AP1Q15904 470 aa12.86□□□□□ -0.35
BEST1-208ENST00000534553 HKDC1Q2TB90 917 aa12.86□□□□□ -0.35
BEST1-208ENST00000534553 ABRAXAS1Q6UWZ7 409 aa12.86□□□□□ -0.35
BEST1-208ENST00000534553 GCNT7Q6ZNI0 430 aa12.86□□□□□ -0.35
BEST1-208ENST00000534553 ZBTB49Q6ZSB9 765 aa12.86□□□□□ -0.35
BEST1-208ENST00000534553 ARMCX6Q7L4S7 300 aa12.86□□□□□ -0.35
BEST1-208ENST00000534553 PGBD3Q8N328 593 aa12.86□□□□□ -0.35
BEST1-208ENST00000534553 SYNPOQ8N3V7 929 aa12.86□□□□□ -0.35
BEST1-208ENST00000534553 TRIML2Q8N7C3 387 aa12.86□□□□□ -0.35
BEST1-208ENST00000534553 OR7A2PQ8NGA2 310 aa12.86□□□□□ -0.35
BEST1-208ENST00000534553 CDC26Q8NHZ8 85 aa12.86□□□□□ -0.35
BEST1-208ENST00000534553 NUDT8Q8WV74 236 aa12.86□□□□□ -0.35
BEST1-208ENST00000534553 GFM2Q969S9 779 aaKnown RBP12.86□□□□□ -0.35
BEST1-208ENST00000534553 TTYH1Q9H313 450 aaPredicted RBP12.86□□□□□ -0.35
BEST1-208ENST00000534553 MAGIXQ9H6Y5 334 aa12.86□□□□□ -0.35
BEST1-208ENST00000534553 FGF22Q9HCT0 170 aa12.86□□□□□ -0.35
BEST1-208ENST00000534553 USP36Q9P275 1121 aaKnown RBP12.86□□□□□ -0.35
BEST1-208ENST00000534553 PCOLCE2Q9UKZ9 415 aa12.86□□□□□ -0.35
BEST1-208ENST00000534553 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.86□□□□□ -0.35
BEST1-208ENST00000534553 CFAP20Q9Y6A4 193 aaKnown RBP12.86□□□□□ -0.35
BEST1-208ENST00000534553 REV3LO60673 3130 aa12.86□□□□□ -0.35
BEST1-208ENST00000534553 NUMA1Q14980 2115 aa12.86□□□□□ -0.35
BEST1-208ENST00000534553 SPTBN5Q9NRC6 3674 aaKnown RBP12.86□□□□□ -0.35
BEST1-208ENST00000534553 GABRR3A8MPY1 467 aa12.85□□□□□ -0.35
BEST1-208ENST00000534553 CLIC1O00299 241 aa12.85□□□□□ -0.35
BEST1-208ENST00000534553 CXCR6O00574 342 aa12.85□□□□□ -0.35
BEST1-208ENST00000534553 DEAF1O75398 565 aaPredicted RBP12.85□□□□□ -0.35
BEST1-208ENST00000534553 LDLRP01130 860 aa12.85□□□□□ -0.35
BEST1-208ENST00000534553 TGFB1P01137 390 aa12.85□□□□□ -0.35
BEST1-208ENST00000534553 ABCB1P08183 1280 aaPredicted RBP12.85□□□□□ -0.35
BEST1-208ENST00000534553 OXTRP30559 389 aa12.85□□□□□ -0.35
BEST1-208ENST00000534553 CCT8P50990 548 aa12.85□□□□□ -0.35
BEST1-208ENST00000534553 ARFIP1P53367 373 aa12.85□□□□□ -0.35
BEST1-208ENST00000534553 DEPDC1Q5TB30 811 aa12.85□□□□□ -0.35
BEST1-208ENST00000534553 KHDRBS2Q5VWX1 349 aaKnown RBP12.85□□□□□ -0.35
BEST1-208ENST00000534553 ADNP2Q6IQ32 1131 aa12.85□□□□□ -0.35
BEST1-208ENST00000534553 HMBOX1Q6NT76 420 aa12.85□□□□□ -0.35
BEST1-208ENST00000534553 TMEM92Q6UXU6 159 aa12.85□□□□□ -0.35
BEST1-208ENST00000534553 CHRDL2Q6WN34 429 aa12.85□□□□□ -0.35
BEST1-208ENST00000534553 SLC9B2Q86UD5 537 aa12.85□□□□□ -0.35
BEST1-208ENST00000534553 FAM124AQ86V42 546 aa12.85□□□□□ -0.35
BEST1-208ENST00000534553 ANKRD46Q86W74 232 aa12.85□□□□□ -0.35
BEST1-208ENST00000534553 FIG4Q92562 907 aa12.85□□□□□ -0.35
BEST1-208ENST00000534553 FAM162AQ96A26 154 aa12.85□□□□□ -0.35
BEST1-208ENST00000534553 INPP5KQ9BT40 448 aa12.85□□□□□ -0.35
BEST1-208ENST00000534553 SEMA6AQ9H2E6 1030 aa12.85□□□□□ -0.35
BEST1-208ENST00000534553 IKZF5Q9H5V7 419 aa12.85□□□□□ -0.35
BEST1-208ENST00000534553 FZD3Q9NPG1 666 aa12.85□□□□□ -0.35
BEST1-208ENST00000534553 OR6C2Q9NZP2 312 aa12.85□□□□□ -0.35
BEST1-208ENST00000534553 ADAM29Q9UKF5 820 aa12.85□□□□□ -0.35
BEST1-208ENST00000534553 VPS4AQ9UN37 437 aa12.85□□□□□ -0.35
BEST1-208ENST00000534553 PCDHGB4Q9UN71 923 aa12.85□□□□□ -0.35
BEST1-208ENST00000534553 AP4B1Q9Y6B7 739 aa12.85□□□□□ -0.35
BEST1-208ENST00000534553 XIRP2A4UGR9 3374 aa12.85□□□□□ -0.35
BEST1-208ENST00000534553 ARHGAP10A1A4S6 786 aa12.85□□□□□ -0.35
BEST1-208ENST00000534553 TXNDC9O14530 226 aa12.85□□□□□ -0.35
BEST1-208ENST00000534553 TBX19O60806 448 aa12.85□□□□□ -0.35
BEST1-208ENST00000534553 CLEC3AO75596 197 aa12.85□□□□□ -0.35
BEST1-208ENST00000534553 LAMP1P11279 417 aa12.85□□□□□ -0.35
BEST1-208ENST00000534553 GABRG2P18507 467 aa12.85□□□□□ -0.35
BEST1-208ENST00000534553 ACSL1P33121 698 aa12.85□□□□□ -0.35
BEST1-208ENST00000534553 SHMT2P34897 504 aa12.85□□□□□ -0.35
BEST1-208ENST00000534553 GZMMP51124 257 aa12.85□□□□□ -0.35
BEST1-208ENST00000534553 CCR5P51681 352 aa12.85□□□□□ -0.35
BEST1-208ENST00000534553 CLCA4Q14CN2 919 aa12.85□□□□□ -0.35
BEST1-208ENST00000534553 RPE65Q16518 533 aa12.85□□□□□ -0.35
BEST1-208ENST00000534553 LINC01555Q8NAE3 123 aa12.85□□□□□ -0.35
BEST1-208ENST00000534553 OR52E1Q8NGJ3 308 aa12.85□□□□□ -0.35
BEST1-208ENST00000534553 GOT1L1Q8NHS2 421 aaPredicted RBP12.85□□□□□ -0.35
BEST1-208ENST00000534553 FAM174AQ8TBP5 190 aa12.85□□□□□ -0.35
BEST1-208ENST00000534553 C16orf78Q8WTQ4 265 aa12.85□□□□□ -0.35
BEST1-208ENST00000534553 ZNF764Q96H86 408 aaPredicted RBP12.85□□□□□ -0.35
BEST1-208ENST00000534553 ACAT2Q9BWD1 397 aa12.85□□□□□ -0.35
BEST1-208ENST00000534553 MS4A8Q9BY19 250 aa12.85□□□□□ -0.35
BEST1-208ENST00000534553 SPNS1Q9H2V7 528 aa12.85□□□□□ -0.35
BEST1-208ENST00000534553 OR51B5Q9H339 312 aa12.85□□□□□ -0.35
BEST1-208ENST00000534553 PIF1Q9H611 641 aa12.85□□□□□ -0.35
BEST1-208ENST00000534553 UBE2ZQ9H832 354 aaPredicted RBP12.85□□□□□ -0.35
BEST1-208ENST00000534553 COQ10BQ9H8M1 238 aa12.85□□□□□ -0.35
BEST1-208ENST00000534553 TRNAU1APQ9NX07 287 aaKnown RBP12.85□□□□□ -0.35
BEST1-208ENST00000534553 PDP2Q9P2J9 529 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms