RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 UBAP2LQ14157 1087 aaKnown RBP9.11□□□□□ -0.95
SSBP3-215ENST00000533946 FRG1Q14331 258 aaKnown RBP9.11□□□□□ -0.95
SSBP3-215ENST00000533946 NR6A1Q15406 480 aa9.11□□□□□ -0.95
SSBP3-215ENST00000533946 KBTBD12Q3ZCT8 623 aa9.11□□□□□ -0.95
SSBP3-215ENST00000533946 VWA5B1Q5TIE3 1220 aa9.11□□□□□ -0.95
SSBP3-215ENST00000533946 CAPN13Q6MZZ7 669 aaPredicted RBP9.11□□□□□ -0.95
SSBP3-215ENST00000533946 FAM45BPQ6NSW5 357 aa9.11□□□□□ -0.95
SSBP3-215ENST00000533946 LCTLQ6UWM7 567 aa9.11□□□□□ -0.95
SSBP3-215ENST00000533946 VN1R5Q7Z5H4 357 aa9.11□□□□□ -0.95
SSBP3-215ENST00000533946 GALNT7Q86SF2 657 aa9.11□□□□□ -0.95
SSBP3-215ENST00000533946 THOC6Q86W42 341 aaKnown RBP9.11□□□□□ -0.95
SSBP3-215ENST00000533946 RAB42Q8N4Z0 105 aa9.11□□□□□ -0.95
SSBP3-215ENST00000533946 MFSD9Q8NBP5 474 aa9.11□□□□□ -0.95
SSBP3-215ENST00000533946 LRRN4CLQ8ND94 238 aa9.11□□□□□ -0.95
SSBP3-215ENST00000533946 TMEM52Q8NDY8 209 aa9.11□□□□□ -0.95
SSBP3-215ENST00000533946 OR51Q1Q8NH59 317 aa9.11□□□□□ -0.95
SSBP3-215ENST00000533946 FAM45AQ8TCE6 357 aa9.11□□□□□ -0.95
SSBP3-215ENST00000533946 SEC14L1Q92503 715 aa9.11□□□□□ -0.95
SSBP3-215ENST00000533946 C16orf45Q96MC5 204 aaPredicted RBP9.11□□□□□ -0.95
SSBP3-215ENST00000533946 NAT9Q9BTE0 207 aa9.11□□□□□ -0.95
SSBP3-215ENST00000533946 DRC3Q9H069 523 aa9.11□□□□□ -0.95
SSBP3-215ENST00000533946 ATP13A2Q9NQ11 1180 aa9.11□□□□□ -0.95
SSBP3-215ENST00000533946 LANCL2Q9NS86 450 aa9.11□□□□□ -0.95
SSBP3-215ENST00000533946 ZDHHC18Q9NUE0 388 aa9.11□□□□□ -0.95
SSBP3-215ENST00000533946 ZFATQ9P243 1243 aa9.11□□□□□ -0.95
SSBP3-215ENST00000533946 PTGFRNQ9P2B2 879 aa9.11□□□□□ -0.95
SSBP3-215ENST00000533946 MAP10Q9P2G4 905 aa9.11□□□□□ -0.95
SSBP3-215ENST00000533946 DMGDHQ9UI17 866 aaKnown RBP9.11□□□□□ -0.95
SSBP3-215ENST00000533946 MKL2Q9ULH7 1088 aa9.11□□□□□ -0.95
SSBP3-215ENST00000533946 NAALAD2Q9Y3Q0 740 aa9.11□□□□□ -0.95
SSBP3-215ENST00000533946 LRBAP50851 2863 aa9.1□□□□□ -0.95
SSBP3-215ENST00000533946 DCHS2Q6V1P9 2916 aa9.1□□□□□ -0.95
SSBP3-215ENST00000533946 KCNE1BA0A087WTH5 132 aa9.1□□□□□ -0.95
SSBP3-215ENST00000533946 IGHV1-45A0A0A0MS14 117 aa9.1□□□□□ -0.95
SSBP3-215ENST00000533946 BLACEA4D250 179 aa9.1□□□□□ -0.95
SSBP3-215ENST00000533946 EIF3FO00303 357 aaPredicted RBP9.1□□□□□ -0.95
SSBP3-215ENST00000533946 SLC16A5O15375 505 aa9.1□□□□□ -0.95
SSBP3-215ENST00000533946 SH3BGRLO75368 114 aa9.1□□□□□ -0.95
SSBP3-215ENST00000533946 PRR35P0CG20 571 aa9.1□□□□□ -0.95
SSBP3-215ENST00000533946 ZNF888P0CJ79 500 aaPredicted RBP9.1□□□□□ -0.95
SSBP3-215ENST00000533946 ACPPP15309 386 aa9.1□□□□□ -0.95
SSBP3-215ENST00000533946 CD22P20273 847 aa9.1□□□□□ -0.95
SSBP3-215ENST00000533946 COL8A1P27658 744 aa9.1□□□□□ -0.95
SSBP3-215ENST00000533946 HSD17B2P37059 387 aa9.1□□□□□ -0.95
SSBP3-215ENST00000533946 MAGEA4P43358 317 aa9.1□□□□□ -0.95
SSBP3-215ENST00000533946 XCR1P46094 333 aa9.1□□□□□ -0.95
SSBP3-215ENST00000533946 RGS4P49798 205 aa9.1□□□□□ -0.95
SSBP3-215ENST00000533946 HNRNPFP52597 415 aaKnown RBP9.1□□□□□ -0.95
SSBP3-215ENST00000533946 RRADP55042 308 aa9.1□□□□□ -0.95
SSBP3-215ENST00000533946 OCA2Q04671 838 aa9.1□□□□□ -0.95
SSBP3-215ENST00000533946 TUBB8Q3ZCM7 444 aa9.1□□□□□ -0.95
SSBP3-215ENST00000533946 DEFB134Q4QY38 66 aa9.1□□□□□ -0.95
SSBP3-215ENST00000533946 YOD1Q5VVQ6 348 aaPredicted RBP9.1□□□□□ -0.95
SSBP3-215ENST00000533946 PRMT9Q6P2P2 845 aa9.1□□□□□ -0.95
SSBP3-215ENST00000533946 TMEM205Q6UW68 189 aa9.1□□□□□ -0.95
SSBP3-215ENST00000533946 Q6ZS92 163 aa9.1□□□□□ -0.95
SSBP3-215ENST00000533946 C3orf62Q6ZUJ4 267 aa9.1□□□□□ -0.95
SSBP3-215ENST00000533946 ASPGQ86U10 573 aa9.1□□□□□ -0.95
SSBP3-215ENST00000533946 C17orf64Q86WR6 236 aa9.1□□□□□ -0.95
SSBP3-215ENST00000533946 KIF2BQ8N4N8 673 aa9.1□□□□□ -0.95
SSBP3-215ENST00000533946 AFAP1L2Q8N4X5 818 aa9.1□□□□□ -0.95
SSBP3-215ENST00000533946 CLEC1AQ8NC01 280 aa9.1□□□□□ -0.95
SSBP3-215ENST00000533946 ABHD11Q8NFV4 315 aa9.1□□□□□ -0.95
SSBP3-215ENST00000533946 FBF1Q8TES7 1133 aa9.1□□□□□ -0.95
SSBP3-215ENST00000533946 CREB3L4Q8TEY5 395 aa9.1□□□□□ -0.95
SSBP3-215ENST00000533946 PYROXD1Q8WU10 500 aa9.1□□□□□ -0.95
SSBP3-215ENST00000533946 SLC13A3Q8WWT9 602 aa9.1□□□□□ -0.95
SSBP3-215ENST00000533946 EXT2Q93063 718 aa9.1□□□□□ -0.95
SSBP3-215ENST00000533946 RERGQ96A58 199 aaPredicted RBP9.1□□□□□ -0.95
SSBP3-215ENST00000533946 PNPLA2Q96AD5 504 aa9.1□□□□□ -0.95
SSBP3-215ENST00000533946 RHBDF1Q96CC6 855 aa9.1□□□□□ -0.95
SSBP3-215ENST00000533946 LRRC39Q96DD0 335 aa9.1□□□□□ -0.95
SSBP3-215ENST00000533946 PEX11GQ96HA9 241 aa9.1□□□□□ -0.95
SSBP3-215ENST00000533946 PDLIM5Q96HC4 596 aaKnown RBP9.1□□□□□ -0.95
SSBP3-215ENST00000533946 IMMP1LQ96LU5 166 aa9.1□□□□□ -0.95
SSBP3-215ENST00000533946 FER1L6-AS2Q96M78 137 aa9.1□□□□□ -0.95
SSBP3-215ENST00000533946 TAAR6Q96RI8 345 aa9.1□□□□□ -0.95
SSBP3-215ENST00000533946 HES7Q9BYE0 225 aa9.1□□□□□ -0.95
SSBP3-215ENST00000533946 RHOJQ9H4E5 214 aa9.1□□□□□ -0.95
SSBP3-215ENST00000533946 SEMA3GQ9NS98 782 aa9.1□□□□□ -0.95
SSBP3-215ENST00000533946 WHRNQ9P202 907 aa9.1□□□□□ -0.95
SSBP3-215ENST00000533946 ANKMY1Q9P2S6 941 aa9.1□□□□□ -0.95
SSBP3-215ENST00000533946 NOVA2Q9UNW9 492 aaKnown RBP9.1□□□□□ -0.95
SSBP3-215ENST00000533946 PCDHGA10Q9Y5H3 936 aa9.1□□□□□ -0.95
SSBP3-215ENST00000533946 POLEQ07864 2286 aa9.09□□□□□ -0.95
SSBP3-215ENST00000533946 FAM187AA6NFU0 413 aa9.09□□□□□ -0.95
SSBP3-215ENST00000533946 NDUFS4O43181 175 aa9.09□□□□□ -0.95
SSBP3-215ENST00000533946 CHST10O43529 356 aa9.09□□□□□ -0.95
SSBP3-215ENST00000533946 CCNDBP1O95273 360 aa9.09□□□□□ -0.95
SSBP3-215ENST00000533946 HEXBP07686 556 aa9.09□□□□□ -0.95
SSBP3-215ENST00000533946 CCDC166P0CW27 439 aa9.09□□□□□ -0.95
SSBP3-215ENST00000533946 CD1DP15813 335 aa9.09□□□□□ -0.95
SSBP3-215ENST00000533946 ECHS1P30084 290 aa9.09□□□□□ -0.95
SSBP3-215ENST00000533946 PPP2R1BP30154 601 aa9.09□□□□□ -0.95
SSBP3-215ENST00000533946 HNRNPH1P31943 449 aaKnown RBP9.09□□□□□ -0.95
SSBP3-215ENST00000533946 SOX11P35716 441 aa9.09□□□□□ -0.95
SSBP3-215ENST00000533946 SCTRP47872 440 aa9.09□□□□□ -0.95
SSBP3-215ENST00000533946 SLC6A12P48065 614 aa9.09□□□□□ -0.95
SSBP3-215ENST00000533946 GLRBP48167 497 aa9.09□□□□□ -0.95
SSBP3-215ENST00000533946 HSPA7P48741 367 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms