RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 NRSN2Q9GZP1 204 aa16.67■□□□□ 0.26
NXF1-216ENST00000533499 ELOVL6Q9H5J4 265 aa16.67■□□□□ 0.26
NXF1-216ENST00000533499 ACTR5Q9H9F9 607 aaPredicted RBP16.67■□□□□ 0.26
NXF1-216ENST00000533499 EML4Q9HC35 981 aaKnown RBP16.67■□□□□ 0.26
NXF1-216ENST00000533499 TXLNGQ9NUQ3 528 aa16.67■□□□□ 0.26
NXF1-216ENST00000533499 INTS9Q9NV88 658 aaKnown RBP16.67■□□□□ 0.26
NXF1-216ENST00000533499 FOXJ2Q9P0K8 574 aa16.67■□□□□ 0.26
NXF1-216ENST00000533499 ZFP69BQ9UJL9 534 aa16.67■□□□□ 0.26
NXF1-216ENST00000533499 ANGPTL2Q9UKU9 493 aa16.67■□□□□ 0.26
NXF1-216ENST00000533499 ZNF490Q9ULM2 529 aaPredicted RBP16.67■□□□□ 0.26
NXF1-216ENST00000533499 MSRB2Q9Y3D2 182 aa16.67■□□□□ 0.26
NXF1-216ENST00000533499 PCDHGA8Q9Y5G5 932 aa16.67■□□□□ 0.26
NXF1-216ENST00000533499 HYKKA2RU49 373 aa16.66■□□□□ 0.26
NXF1-216ENST00000533499 C9orf172C9J069 976 aa16.66■□□□□ 0.26
NXF1-216ENST00000533499 P2RX6O15547 441 aa16.66■□□□□ 0.26
NXF1-216ENST00000533499 NPHS1O60500 1241 aa16.66■□□□□ 0.26
NXF1-216ENST00000533499 UGDHO60701 494 aa16.66■□□□□ 0.26
NXF1-216ENST00000533499 LYPLA1O75608 230 aaPredicted RBP16.66■□□□□ 0.26
NXF1-216ENST00000533499 CAPN1P07384 714 aa16.66■□□□□ 0.26
NXF1-216ENST00000533499 CHRNGP07510 517 aa16.66■□□□□ 0.26
NXF1-216ENST00000533499 SLC5A2P31639 672 aa16.66■□□□□ 0.26
NXF1-216ENST00000533499 AHRP35869 848 aa16.66■□□□□ 0.26
NXF1-216ENST00000533499 NEK2P51955 445 aa16.66■□□□□ 0.26
NXF1-216ENST00000533499 PKNOX1P55347 436 aa16.66■□□□□ 0.26
NXF1-216ENST00000533499 PHEXP78562 749 aa16.66■□□□□ 0.26
NXF1-216ENST00000533499 RELAQ04206 551 aa16.66■□□□□ 0.26
NXF1-216ENST00000533499 IFT88Q13099 833 aa16.66■□□□□ 0.26
NXF1-216ENST00000533499 STX3Q13277 289 aa16.66■□□□□ 0.26
NXF1-216ENST00000533499 CAMK2BQ13554 666 aa16.66■□□□□ 0.26
NXF1-216ENST00000533499 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.66■□□□□ 0.26
NXF1-216ENST00000533499 ARL13AQ5H913 290 aaPredicted RBP16.66■□□□□ 0.26
NXF1-216ENST00000533499 TOR1AIP1Q5JTV8 583 aa16.66■□□□□ 0.26
NXF1-216ENST00000533499 C1orf189Q5VU69 101 aa16.66■□□□□ 0.26
NXF1-216ENST00000533499 TLDC1Q6P9B6 456 aa16.66■□□□□ 0.26
NXF1-216ENST00000533499 CUZD1Q86UP6 607 aa16.66■□□□□ 0.26
NXF1-216ENST00000533499 LSMEM2Q8N112 164 aa16.66■□□□□ 0.26
NXF1-216ENST00000533499 METTL27Q8N6F8 245 aaPredicted RBP16.66■□□□□ 0.26
NXF1-216ENST00000533499 L3MBTL4Q8NA19 623 aa16.66■□□□□ 0.26
NXF1-216ENST00000533499 TTLQ8NG68 377 aa16.66■□□□□ 0.26
NXF1-216ENST00000533499 OR7G3Q8NG95 312 aa16.66■□□□□ 0.26
NXF1-216ENST00000533499 AGAP11Q8TF27 550 aa16.66■□□□□ 0.26
NXF1-216ENST00000533499 MAGEB10Q96LZ2 347 aaPredicted RBP16.66■□□□□ 0.26
NXF1-216ENST00000533499 SLC46A1Q96NT5 459 aa16.66■□□□□ 0.26
NXF1-216ENST00000533499 TEFMQ96QE5 360 aaKnown RBP16.66■□□□□ 0.26
NXF1-216ENST00000533499 MTERF1Q99551 399 aaKnown RBP16.66■□□□□ 0.26
NXF1-216ENST00000533499 DDA1Q9BW61 102 aa16.66■□□□□ 0.26
NXF1-216ENST00000533499 NT5DC2Q9H857 520 aa16.66■□□□□ 0.26
NXF1-216ENST00000533499 TRPS1Q9UHF7 1281 aa16.66■□□□□ 0.26
NXF1-216ENST00000533499 RUVBL1Q9Y265 456 aaKnown RBP16.66■□□□□ 0.26
NXF1-216ENST00000533499 TIMM22Q9Y584 194 aa16.66■□□□□ 0.26
NXF1-216ENST00000533499 PCDHGA11Q9Y5H2 935 aa16.66■□□□□ 0.26
NXF1-216ENST00000533499 AP1M2Q9Y6Q5 423 aa16.66■□□□□ 0.26
NXF1-216ENST00000533499 SPEGQ15772 3267 aa16.66■□□□□ 0.26
NXF1-216ENST00000533499 KCNE1BA0A087WTH5 132 aa16.65■□□□□ 0.26
NXF1-216ENST00000533499 TXNDC9O14530 226 aa16.65■□□□□ 0.26
NXF1-216ENST00000533499 UBFD1O14562 309 aaKnown RBP16.65■□□□□ 0.26
NXF1-216ENST00000533499 ZNF28P17035 718 aa16.65■□□□□ 0.26
NXF1-216ENST00000533499 TCHHL1Q5QJ38 904 aaPredicted RBP16.65■□□□□ 0.26
NXF1-216ENST00000533499 TTLL10Q6ZVT0 673 aa16.65■□□□□ 0.26
NXF1-216ENST00000533499 ZFAND4Q86XD8 727 aa16.65■□□□□ 0.26
NXF1-216ENST00000533499 TRIM42Q8IWZ5 723 aa16.65■□□□□ 0.26
NXF1-216ENST00000533499 RNF175Q8N4F7 328 aa16.65■□□□□ 0.26
NXF1-216ENST00000533499 KCT2Q8NC54 265 aa16.65■□□□□ 0.26
NXF1-216ENST00000533499 TRPV3Q8NET8 790 aa16.65■□□□□ 0.26
NXF1-216ENST00000533499 SELENOMQ8WWX9 145 aa16.65■□□□□ 0.26
NXF1-216ENST00000533499 ZPBPQ9BS86 351 aa16.65■□□□□ 0.26
NXF1-216ENST00000533499 TRMOQ9BU70 441 aa16.65■□□□□ 0.26
NXF1-216ENST00000533499 PITHD1Q9GZP4 211 aaPredicted RBP16.65■□□□□ 0.26
NXF1-216ENST00000533499 THSD1Q9NS62 852 aa16.65■□□□□ 0.26
NXF1-216ENST00000533499 CUTCQ9NTM9 273 aa16.65■□□□□ 0.26
NXF1-216ENST00000533499 DHCR7Q9UBM7 475 aaKnown RBP16.65■□□□□ 0.26
NXF1-216ENST00000533499 SNX6Q9UNH7 406 aa16.65■□□□□ 0.26
NXF1-216ENST00000533499 WASF3Q9UPY6 502 aa16.65■□□□□ 0.26
NXF1-216ENST00000533499 TMEM114B3SHH9 223 aa16.64■□□□□ 0.25
NXF1-216ENST00000533499 ITM2AO43736 263 aa16.64■□□□□ 0.25
NXF1-216ENST00000533499 STK17BO94768 372 aa16.64■□□□□ 0.25
NXF1-216ENST00000533499 ESRRBO95718 433 aa16.64■□□□□ 0.25
NXF1-216ENST00000533499 KRT6AP02538 564 aa16.64■□□□□ 0.25
NXF1-216ENST00000533499 KRT6BP04259 564 aa16.64■□□□□ 0.25
NXF1-216ENST00000533499 ENO1P06733 434 aaKnown RBP16.64■□□□□ 0.25
NXF1-216ENST00000533499 MSL3P1P0C860 447 aa16.64■□□□□ 0.25
NXF1-216ENST00000533499 GRK2P25098 689 aa16.64■□□□□ 0.25
NXF1-216ENST00000533499 SERPINB3P29508 390 aa16.64■□□□□ 0.25
NXF1-216ENST00000533499 SLC1A6P48664 564 aa16.64■□□□□ 0.25
NXF1-216ENST00000533499 KRT6CP48668 564 aa16.64■□□□□ 0.25
NXF1-216ENST00000533499 ABCE1P61221 599 aaKnown RBP16.64■□□□□ 0.25
NXF1-216ENST00000533499 RTP5Q14D33 572 aa16.64■□□□□ 0.25
NXF1-216ENST00000533499 NDUFA9Q16795 377 aa16.64■□□□□ 0.25
NXF1-216ENST00000533499 FAM214AQ32MH5 1076 aa16.64■□□□□ 0.25
NXF1-216ENST00000533499 FRG2Q64ET8 278 aa16.64■□□□□ 0.25
NXF1-216ENST00000533499 ATG16L1Q676U5 607 aa16.64■□□□□ 0.25
NXF1-216ENST00000533499 CLEC6AQ6EIG7 209 aa16.64■□□□□ 0.25
NXF1-216ENST00000533499 SCIMPQ6UWF3 145 aa16.64■□□□□ 0.25
NXF1-216ENST00000533499 LAS2Q8IYD9 372 aa16.64■□□□□ 0.25
NXF1-216ENST00000533499 ARFGAP2Q8N6H7 521 aa16.64■□□□□ 0.25
NXF1-216ENST00000533499 GALNT6Q8NCL4 622 aa16.64■□□□□ 0.25
NXF1-216ENST00000533499 HUS1BQ8NHY5 278 aa16.64■□□□□ 0.25
NXF1-216ENST00000533499 FRG2BQ96QU4 278 aa16.64■□□□□ 0.25
NXF1-216ENST00000533499 HBEGFQ99075 208 aa16.64■□□□□ 0.25
NXF1-216ENST00000533499 MANSC1Q9H8J5 431 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms