RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 LASP1Q14847 261 aaKnown RBP17■□□□□ 0.31
PHRF1-205ENST00000533464 TMEM44Q2T9K0 475 aa17■□□□□ 0.31
PHRF1-205ENST00000533464 TRAM1L1Q8N609 369 aa17■□□□□ 0.31
PHRF1-205ENST00000533464 AQP11Q8NBQ7 271 aa17■□□□□ 0.31
PHRF1-205ENST00000533464 OR6K6Q8NGW6 343 aa17■□□□□ 0.31
PHRF1-205ENST00000533464 MS4A4AQ96JQ5 239 aa17■□□□□ 0.31
PHRF1-205ENST00000533464 KCNH6Q9H252 994 aa17■□□□□ 0.31
PHRF1-205ENST00000533464 ADAMTS6Q9UKP5 1117 aa17■□□□□ 0.31
PHRF1-205ENST00000533464 HMGN1P05114 100 aa16.99■□□□□ 0.31
PHRF1-205ENST00000533464 FUT4P22083 530 aa16.99■□□□□ 0.31
PHRF1-205ENST00000533464 TCEA1P23193 301 aaKnown RBP16.99■□□□□ 0.31
PHRF1-205ENST00000533464 OR8J3Q8NGG0 315 aa16.99■□□□□ 0.31
PHRF1-205ENST00000533464 C9orf43Q8TAL5 461 aaPredicted RBP16.99■□□□□ 0.31
PHRF1-205ENST00000533464 LRIG1Q96JA1 1093 aa16.99■□□□□ 0.31
PHRF1-205ENST00000533464 C17orf62Q9BQA9 187 aa16.99■□□□□ 0.31
PHRF1-205ENST00000533464 GLOD5A6NK44 160 aa16.99■□□□□ 0.31
PHRF1-205ENST00000533464 MAGEB3O15480 346 aa16.99■□□□□ 0.31
PHRF1-205ENST00000533464 RFPL2O75678 378 aa16.99■□□□□ 0.31
PHRF1-205ENST00000533464 BNC1Q01954 994 aa16.99■□□□□ 0.31
PHRF1-205ENST00000533464 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.99■□□□□ 0.31
PHRF1-205ENST00000533464 CDH24Q86UP0 819 aa16.99■□□□□ 0.31
PHRF1-205ENST00000533464 TMEM126BQ8IUX1 230 aa16.99■□□□□ 0.31
PHRF1-205ENST00000533464 RAB8BQ92930 207 aa16.99■□□□□ 0.31
PHRF1-205ENST00000533464 ALPK1Q96QP1 1244 aa16.99■□□□□ 0.31
PHRF1-205ENST00000533464 REEP4Q9H6H4 257 aa16.99■□□□□ 0.31
PHRF1-205ENST00000533464 TM9SF3Q9HD45 589 aa16.99■□□□□ 0.31
PHRF1-205ENST00000533464 MTMR10Q9NXD2 777 aa16.99■□□□□ 0.31
PHRF1-205ENST00000533464 DHRS4L1P0CG22 281 aa16.99■□□□□ 0.31
PHRF1-205ENST00000533464 CLCN7P51798 805 aa16.99■□□□□ 0.31
PHRF1-205ENST00000533464 ARFIP1P53367 373 aa16.99■□□□□ 0.31
PHRF1-205ENST00000533464 MYBPC3Q14896 1274 aa16.99■□□□□ 0.31
PHRF1-205ENST00000533464 NRSN1Q8IZ57 195 aa16.99■□□□□ 0.31
PHRF1-205ENST00000533464 MAPK15Q8TD08 544 aa16.99■□□□□ 0.31
PHRF1-205ENST00000533464 TAPBPLQ9BX59 468 aa16.99■□□□□ 0.31
PHRF1-205ENST00000533464 MKKSQ9NPJ1 570 aaPredicted RBP16.99■□□□□ 0.31
PHRF1-205ENST00000533464 AGR2O95994 175 aa16.99■□□□□ 0.31
PHRF1-205ENST00000533464 TMCO2Q7Z6W1 182 aaPredicted RBP16.99■□□□□ 0.31
PHRF1-205ENST00000533464 ZFAND4Q86XD8 727 aa16.99■□□□□ 0.31
PHRF1-205ENST00000533464 GHDCQ8N2G8 530 aa16.99■□□□□ 0.31
PHRF1-205ENST00000533464 CDH7Q9ULB5 785 aa16.99■□□□□ 0.31
PHRF1-205ENST00000533464 REM1O75628 298 aa16.98■□□□□ 0.31
PHRF1-205ENST00000533464 NDUFA5Q16718 116 aa16.98■□□□□ 0.31
PHRF1-205ENST00000533464 SPRED3Q2MJR0 410 aa16.98■□□□□ 0.31
PHRF1-205ENST00000533464 UBE2J2Q8N2K1 259 aa16.98■□□□□ 0.31
PHRF1-205ENST00000533464 UCK2Q9BZX2 261 aa16.98■□□□□ 0.31
PHRF1-205ENST00000533464 CCM2LQ9NUG4 571 aaPredicted RBP16.98■□□□□ 0.31
PHRF1-205ENST00000533464 COMMD3Q9UBI1 195 aa16.98■□□□□ 0.31
PHRF1-205ENST00000533464 TTC34A8MYJ7 566 aa16.98■□□□□ 0.31
PHRF1-205ENST00000533464 TNFP01375 233 aa16.98■□□□□ 0.31
PHRF1-205ENST00000533464 GSTM3P21266 225 aa16.98■□□□□ 0.31
PHRF1-205ENST00000533464 APLP1P51693 650 aa16.98■□□□□ 0.31
PHRF1-205ENST00000533464 BLOC1S3Q6QNY0 202 aa16.98■□□□□ 0.31
PHRF1-205ENST00000533464 KLHL24Q6TFL4 600 aa16.98■□□□□ 0.31
PHRF1-205ENST00000533464 MEIOBQ8N635 442 aa16.98■□□□□ 0.31
PHRF1-205ENST00000533464 GRHL3Q8TE85 626 aa16.98■□□□□ 0.31
PHRF1-205ENST00000533464 SLC45A3Q96JT2 553 aa16.98■□□□□ 0.31
PHRF1-205ENST00000533464 PHF11Q9UIL8 331 aa16.98■□□□□ 0.31
PHRF1-205ENST00000533464 PTBP2Q9UKA9 531 aaKnown RBP16.98■□□□□ 0.31
PHRF1-205ENST00000533464 SPO11Q9Y5K1 396 aa16.98■□□□□ 0.31
PHRF1-205ENST00000533464 ZNF12P17014 697 aa16.98■□□□□ 0.31
PHRF1-205ENST00000533464 BPIP17213 487 aa16.98■□□□□ 0.31
PHRF1-205ENST00000533464 FAUP35544 74 aaKnown RBP16.98■□□□□ 0.31
PHRF1-205ENST00000533464 ARCN1P48444 511 aaKnown RBP16.98■□□□□ 0.31
PHRF1-205ENST00000533464 DPYSL5Q9BPU6 564 aa16.98■□□□□ 0.31
PHRF1-205ENST00000533464 XKR8Q9H6D3 395 aa16.98■□□□□ 0.31
PHRF1-205ENST00000533464 CLCA3PQ9Y6N3 262 aa16.98■□□□□ 0.31
PHRF1-205ENST00000533464 PKD1L3Q7Z443 1732 aa16.98■□□□□ 0.31
PHRF1-205ENST00000533464 LATS1O95835 1130 aa16.98■□□□□ 0.31
PHRF1-205ENST00000533464 CTSOP43234 321 aaPredicted RBP16.98■□□□□ 0.31
PHRF1-205ENST00000533464 MVKQ03426 396 aa16.98■□□□□ 0.31
PHRF1-205ENST00000533464 ITPRIPL2Q3MIP1 535 aa16.98■□□□□ 0.31
PHRF1-205ENST00000533464 TSPAN33Q86UF1 283 aa16.98■□□□□ 0.31
PHRF1-205ENST00000533464 CMTR2Q8IYT2 770 aaKnown RBP16.98■□□□□ 0.31
PHRF1-205ENST00000533464 KDM1BQ8NB78 822 aa16.98■□□□□ 0.31
PHRF1-205ENST00000533464 FUBP1Q96AE4 644 aaKnown RBP16.98■□□□□ 0.31
PHRF1-205ENST00000533464 DIABLOQ9NR28 239 aa16.98■□□□□ 0.31
PHRF1-205ENST00000533464 UBAP1Q9NZ09 502 aa16.98■□□□□ 0.31
PHRF1-205ENST00000533464 NFKBIL1Q9UBC1 381 aaPredicted RBP16.98■□□□□ 0.31
PHRF1-205ENST00000533464 FABP12A6NFH5 140 aa16.97■□□□□ 0.31
PHRF1-205ENST00000533464 MPC1LP0DKB6 136 aa16.97■□□□□ 0.31
PHRF1-205ENST00000533464 CD70P32970 193 aa16.97■□□□□ 0.31
PHRF1-205ENST00000533464 OR1E2P47887 323 aa16.97■□□□□ 0.31
PHRF1-205ENST00000533464 RAB33AQ14088 237 aa16.97■□□□□ 0.31
PHRF1-205ENST00000533464 RNF31Q96EP0 1072 aa16.97■□□□□ 0.31
PHRF1-205ENST00000533464 BOCQ9BWV1 1114 aa16.97■□□□□ 0.31
PHRF1-205ENST00000533464 LIN28AQ9H9Z2 209 aaKnown RBP16.97■□□□□ 0.31
PHRF1-205ENST00000533464 FARSBQ9NSD9 589 aaKnown RBP16.97■□□□□ 0.31
PHRF1-205ENST00000533464 TAS2R7Q9NYW3 318 aa16.97■□□□□ 0.31
PHRF1-205ENST00000533464 RHCGQ9UBD6 479 aa16.97■□□□□ 0.31
PHRF1-205ENST00000533464 URB1O60287 2271 aaKnown RBP16.97■□□□□ 0.31
PHRF1-205ENST00000533464 SLC16A5O15375 505 aa16.97■□□□□ 0.31
PHRF1-205ENST00000533464 SOX14O95416 240 aa16.97■□□□□ 0.31
PHRF1-205ENST00000533464 C1GALT1C1LP0DN25 315 aa16.97■□□□□ 0.31
PHRF1-205ENST00000533464 ATG9BQ674R7 924 aa16.97■□□□□ 0.31
PHRF1-205ENST00000533464 REEP3Q6NUK4 255 aa16.97■□□□□ 0.31
PHRF1-205ENST00000533464 KLHL6Q8WZ60 621 aa16.97■□□□□ 0.31
PHRF1-205ENST00000533464 TRIB3Q96RU7 358 aa16.97■□□□□ 0.31
PHRF1-205ENST00000533464 MAPKAP1Q9BPZ7 522 aa16.97■□□□□ 0.31
PHRF1-205ENST00000533464 DCSTAMPQ9H295 470 aa16.97■□□□□ 0.31
PHRF1-205ENST00000533464 ANKRA2Q9H9E1 313 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms