RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 VPS11Q9H270 941 aa19.43■□□□□ 0.7
CCS-208ENST00000533244 EHD1Q9H4M9 534 aa19.43■□□□□ 0.7
CCS-208ENST00000533244 ZFP69BQ9UJL9 534 aa19.43■□□□□ 0.7
CCS-208ENST00000533244 BSNQ9UPA5 3926 aa19.43■□□□□ 0.7
CCS-208ENST00000533244 COL6A6A6NMZ7 2263 aa19.43■□□□□ 0.7
CCS-208ENST00000533244 A0A0A6YYC8 382 aaPredicted RBP19.42■□□□□ 0.7
CCS-208ENST00000533244 SYCE1LA8MT33 242 aa19.42■□□□□ 0.7
CCS-208ENST00000533244 SUPT3HB4E1H0 165 aa19.42■□□□□ 0.7
CCS-208ENST00000533244 I3L1I5 382 aaPredicted RBP19.42■□□□□ 0.7
CCS-208ENST00000533244 KLK8O60259 260 aa19.42■□□□□ 0.7
CCS-208ENST00000533244 PRAMEF4O60810 478 aa19.42■□□□□ 0.7
CCS-208ENST00000533244 SUPT3HO75486 399 aa19.42■□□□□ 0.7
CCS-208ENST00000533244 C1QL1O75973 258 aa19.42■□□□□ 0.7
CCS-208ENST00000533244 NSA2O95478 260 aaKnown RBP19.42■□□□□ 0.7
CCS-208ENST00000533244 SLC35G6P0C7Q6 338 aa19.42■□□□□ 0.7
CCS-208ENST00000533244 ATXN8OSP0DMR3 200 aa19.42■□□□□ 0.7
CCS-208ENST00000533244 C1GALT1C1LP0DN25 315 aa19.42■□□□□ 0.7
CCS-208ENST00000533244 COL6A2P12110 1019 aa19.42■□□□□ 0.7
CCS-208ENST00000533244 EPORP19235 508 aa19.42■□□□□ 0.7
CCS-208ENST00000533244 FBLP22087 321 aaKnown RBP19.42■□□□□ 0.7
CCS-208ENST00000533244 VARSP26640 1264 aaKnown RBP19.42■□□□□ 0.7
CCS-208ENST00000533244 GLRBP48167 497 aa19.42■□□□□ 0.7
CCS-208ENST00000533244 PWP1Q13610 501 aa19.42■□□□□ 0.7
CCS-208ENST00000533244 E2F2Q14209 437 aa19.42■□□□□ 0.7
CCS-208ENST00000533244 TECRLQ5HYJ1 363 aa19.42■□□□□ 0.7
CCS-208ENST00000533244 PRAMEF9Q5VWM5 478 aa19.42■□□□□ 0.7
CCS-208ENST00000533244 TIFABQ6ZNK6 161 aa19.42■□□□□ 0.7
CCS-208ENST00000533244 MRGPREQ86SM8 312 aa19.42■□□□□ 0.7
CCS-208ENST00000533244 KCT2Q8NC54 265 aa19.42■□□□□ 0.7
CCS-208ENST00000533244 NT5CQ8TCD5 201 aa19.42■□□□□ 0.7
CCS-208ENST00000533244 COL26A1Q96A83 441 aa19.42■□□□□ 0.7
CCS-208ENST00000533244 NACC2Q96BF6 587 aa19.42■□□□□ 0.7
CCS-208ENST00000533244 WDR34Q96EX3 536 aa19.42■□□□□ 0.7
CCS-208ENST00000533244 ZNF282Q9UDV7 671 aaPredicted RBP19.42■□□□□ 0.7
CCS-208ENST00000533244 SLC22A7Q9Y694 548 aa19.42■□□□□ 0.7
CCS-208ENST00000533244 BOD1L1Q8NFC6 3051 aa19.42■□□□□ 0.7
CCS-208ENST00000533244 H0YIG0 161 aa19.42■□□□□ 0.7
CCS-208ENST00000533244 MAP2K7O14733 419 aa19.42■□□□□ 0.7
CCS-208ENST00000533244 SLU7O95391 586 aaKnown RBP19.42■□□□□ 0.7
CCS-208ENST00000533244 SFTPCP11686 197 aa19.42■□□□□ 0.7
CCS-208ENST00000533244 KCNAB2Q13303 367 aa19.42■□□□□ 0.7
CCS-208ENST00000533244 PDK4Q16654 411 aa19.42■□□□□ 0.7
CCS-208ENST00000533244 KLC3Q6P597 504 aa19.42■□□□□ 0.7
CCS-208ENST00000533244 PPP1R32Q7Z5V6 425 aa19.42■□□□□ 0.7
CCS-208ENST00000533244 AFAP1L2Q8N4X5 818 aa19.42■□□□□ 0.7
CCS-208ENST00000533244 STT3BQ8TCJ2 826 aa19.42■□□□□ 0.7
CCS-208ENST00000533244 MTBPQ96DY7 904 aa19.42■□□□□ 0.7
CCS-208ENST00000533244 MOCOSQ96EN8 888 aa19.42■□□□□ 0.7
CCS-208ENST00000533244 MMABQ96EY8 250 aaPredicted RBP19.42■□□□□ 0.7
CCS-208ENST00000533244 IP6K3Q96PC2 410 aa19.42■□□□□ 0.7
CCS-208ENST00000533244 ZNF358Q9NW07 568 aa19.42■□□□□ 0.7
CCS-208ENST00000533244 MAP4K5Q9Y4K4 846 aa19.42■□□□□ 0.7
CCS-208ENST00000533244 NDUFS4O43181 175 aa19.41■□□□□ 0.7
CCS-208ENST00000533244 RFPL1O75677 317 aa19.41■□□□□ 0.7
CCS-208ENST00000533244 PRB1P04280 392 aa19.41■□□□□ 0.7
CCS-208ENST00000533244 CXCR2P25025 360 aa19.41■□□□□ 0.7
CCS-208ENST00000533244 OTX2P32243 289 aa19.41■□□□□ 0.7
CCS-208ENST00000533244 AGTR2P50052 363 aa19.41■□□□□ 0.7
CCS-208ENST00000533244 PCDH1Q08174 1060 aa19.41■□□□□ 0.7
CCS-208ENST00000533244 ATP1A4Q13733 1029 aa19.41■□□□□ 0.7
CCS-208ENST00000533244 SETDB1Q15047 1291 aa19.41■□□□□ 0.7
CCS-208ENST00000533244 LGSNQ5TDP6 509 aa19.41■□□□□ 0.7
CCS-208ENST00000533244 CPZQ66K79 652 aa19.41■□□□□ 0.7
CCS-208ENST00000533244 PRSS41Q7RTY9 318 aa19.41■□□□□ 0.7
CCS-208ENST00000533244 CNPY4Q8N129 248 aa19.41■□□□□ 0.7
CCS-208ENST00000533244 OR9A4Q8NGU2 314 aa19.41■□□□□ 0.7
CCS-208ENST00000533244 TRIM55Q9BYV6 548 aa19.41■□□□□ 0.7
CCS-208ENST00000533244 TGIF2Q9GZN2 237 aa19.41■□□□□ 0.7
CCS-208ENST00000533244 PITHD1Q9GZP4 211 aaPredicted RBP19.41■□□□□ 0.7
CCS-208ENST00000533244 NT5DC2Q9H857 520 aa19.41■□□□□ 0.7
CCS-208ENST00000533244 MED13Q9UHV7 2174 aa19.4■□□□□ 0.7
CCS-208ENST00000533244 ARGFXA6NJG6 315 aa19.4■□□□□ 0.7
CCS-208ENST00000533244 K7EPI3 171 aa19.4■□□□□ 0.7
CCS-208ENST00000533244 CCNT2O60583 730 aaKnown RBP19.4■□□□□ 0.7
CCS-208ENST00000533244 ZGLP1P0C6A0 271 aa19.4■□□□□ 0.7
CCS-208ENST00000533244 MMP11P24347 488 aa19.4■□□□□ 0.7
CCS-208ENST00000533244 AVPR1BP47901 424 aa19.4■□□□□ 0.7
CCS-208ENST00000533244 VSNL1P62760 191 aa19.4■□□□□ 0.7
CCS-208ENST00000533244 OCA2Q04671 838 aa19.4■□□□□ 0.7
CCS-208ENST00000533244 HYAL2Q12891 473 aa19.4■□□□□ 0.7
CCS-208ENST00000533244 SLBPQ14493 270 aaKnown RBP eCLIP19.4■□□□□ 0.7
CCS-208ENST00000533244 NAA30Q147X3 362 aaPredicted RBP19.4■□□□□ 0.7
CCS-208ENST00000533244 TSNAXIP1Q2TAA8 658 aa19.4■□□□□ 0.7
CCS-208ENST00000533244 PDSS2Q86YH6 399 aa19.4■□□□□ 0.7
CCS-208ENST00000533244 TRPV3Q8NET8 790 aa19.4■□□□□ 0.7
CCS-208ENST00000533244 CREB3L4Q8TEY5 395 aa19.4■□□□□ 0.7
CCS-208ENST00000533244 SLC6A16Q9GZN6 736 aa19.4■□□□□ 0.7
CCS-208ENST00000533244 SOX17Q9H6I2 414 aaPredicted RBP19.4■□□□□ 0.7
CCS-208ENST00000533244 MKKSQ9NPJ1 570 aaPredicted RBP19.4■□□□□ 0.7
CCS-208ENST00000533244 C14orf105Q9NVL8 296 aa19.4■□□□□ 0.7
CCS-208ENST00000533244 TRPC4Q9UBN4 977 aa19.4■□□□□ 0.7
CCS-208ENST00000533244 NUP210LQ5VU65 1888 aa19.4■□□□□ 0.7
CCS-208ENST00000533244 SPTA1P02549 2419 aa19.39■□□□□ 0.69
CCS-208ENST00000533244 CLGNO14967 610 aa19.39■□□□□ 0.69
CCS-208ENST00000533244 RBP1P09455 135 aa19.39■□□□□ 0.69
CCS-208ENST00000533244 IL1RNP18510 177 aa19.39■□□□□ 0.69
CCS-208ENST00000533244 CD22P20273 847 aa19.39■□□□□ 0.69
CCS-208ENST00000533244 GSTM2P28161 218 aa19.39■□□□□ 0.69
CCS-208ENST00000533244 CASP2P42575 452 aa19.39■□□□□ 0.69
CCS-208ENST00000533244 ALDH18A1P54886 795 aaKnown RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms