RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 RBBP5Q15291 538 aaKnown RBP11.41□□□□□ -0.58
SSBP3-214ENST00000533209 COL28A1Q2UY09 1125 aa11.41□□□□□ -0.58
SSBP3-214ENST00000533209 KRT71Q3SY84 523 aa11.41□□□□□ -0.58
SSBP3-214ENST00000533209 GARNL3Q5VVW2 1013 aa11.41□□□□□ -0.58
SSBP3-214ENST00000533209 TMEM214Q6NUQ4 689 aaKnown RBP11.41□□□□□ -0.58
SSBP3-214ENST00000533209 GTF2H2CQ6P1K8 395 aa11.41□□□□□ -0.58
SSBP3-214ENST00000533209 INO80CQ6PI98 192 aaPredicted RBP11.41□□□□□ -0.58
SSBP3-214ENST00000533209 TMIGD1Q6UXZ0 262 aa11.41□□□□□ -0.58
SSBP3-214ENST00000533209 COX15Q7KZN9 410 aa11.41□□□□□ -0.58
SSBP3-214ENST00000533209 GOLGA7Q7Z5G4 137 aa11.41□□□□□ -0.58
SSBP3-214ENST00000533209 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.41□□□□□ -0.58
SSBP3-214ENST00000533209 KRT78Q8N1N4 520 aa11.41□□□□□ -0.58
SSBP3-214ENST00000533209 METTL27Q8N6F8 245 aaPredicted RBP11.41□□□□□ -0.58
SSBP3-214ENST00000533209 KCT2Q8NC54 265 aa11.41□□□□□ -0.58
SSBP3-214ENST00000533209 CAMKVQ8NCB2 501 aa11.41□□□□□ -0.58
SSBP3-214ENST00000533209 SNRNP27Q8WVK2 155 aaKnown RBP11.41□□□□□ -0.58
SSBP3-214ENST00000533209 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.41□□□□□ -0.58
SSBP3-214ENST00000533209 MOCOSQ96EN8 888 aa11.41□□□□□ -0.58
SSBP3-214ENST00000533209 ZIM3Q96PE6 472 aa11.41□□□□□ -0.58
SSBP3-214ENST00000533209 EFHD1Q9BUP0 239 aa11.41□□□□□ -0.58
SSBP3-214ENST00000533209 EFCAB11Q9BUY7 163 aa11.41□□□□□ -0.58
SSBP3-214ENST00000533209 GPR87Q9BY21 358 aa11.41□□□□□ -0.58
SSBP3-214ENST00000533209 NLNQ9BYT8 704 aa11.41□□□□□ -0.58
SSBP3-214ENST00000533209 FAM117AQ9C073 453 aa11.41□□□□□ -0.58
SSBP3-214ENST00000533209 PITHD1Q9GZP4 211 aaPredicted RBP11.41□□□□□ -0.58
SSBP3-214ENST00000533209 C12orf65Q9H3J6 166 aaKnown RBP11.41□□□□□ -0.58
SSBP3-214ENST00000533209 PRORYQ9H606 182 aa11.41□□□□□ -0.58
SSBP3-214ENST00000533209 NT5DC2Q9H857 520 aa11.41□□□□□ -0.58
SSBP3-214ENST00000533209 KCND3Q9UK17 655 aa11.41□□□□□ -0.58
SSBP3-214ENST00000533209 PCTPQ9UKL6 214 aa11.41□□□□□ -0.58
SSBP3-214ENST00000533209 ZNF490Q9ULM2 529 aaPredicted RBP11.41□□□□□ -0.58
SSBP3-214ENST00000533209 FARSAQ9Y285 508 aaKnown RBP11.41□□□□□ -0.58
SSBP3-214ENST00000533209 ANGPTL3Q9Y5C1 460 aa11.41□□□□□ -0.58
SSBP3-214ENST00000533209 MGAQ8IWI9 3026 aa11.4□□□□□ -0.58
SSBP3-214ENST00000533209 C9J4A7 227 aa11.4□□□□□ -0.58
SSBP3-214ENST00000533209 COPEO14579 308 aa11.4□□□□□ -0.58
SSBP3-214ENST00000533209 PLIN3O60664 434 aa11.4□□□□□ -0.58
SSBP3-214ENST00000533209 KATNA1O75449 491 aa11.4□□□□□ -0.58
SSBP3-214ENST00000533209 PROCP04070 461 aa11.4□□□□□ -0.58
SSBP3-214ENST00000533209 RPS17P08708 135 aaKnown RBP11.4□□□□□ -0.58
SSBP3-214ENST00000533209 SLC35G6P0C7Q6 338 aa11.4□□□□□ -0.58
SSBP3-214ENST00000533209 ATXN8OSP0DMR3 200 aa11.4□□□□□ -0.58
SSBP3-214ENST00000533209 TAC1P20366 129 aa11.4□□□□□ -0.58
SSBP3-214ENST00000533209 PTPN4P29074 926 aa11.4□□□□□ -0.58
SSBP3-214ENST00000533209 OR1D4P47884 311 aa11.4□□□□□ -0.58
SSBP3-214ENST00000533209 CCT5P48643 541 aa11.4□□□□□ -0.58
SSBP3-214ENST00000533209 PIK3CGP48736 1102 aa11.4□□□□□ -0.58
SSBP3-214ENST00000533209 RPS18P62269 152 aaKnown RBP11.4□□□□□ -0.58
SSBP3-214ENST00000533209 RPS15P62841 145 aaKnown RBP11.4□□□□□ -0.58
SSBP3-214ENST00000533209 CXADRP78310 365 aa11.4□□□□□ -0.58
SSBP3-214ENST00000533209 CYP4F2P78329 520 aa11.4□□□□□ -0.58
SSBP3-214ENST00000533209 HYAL2Q12891 473 aa11.4□□□□□ -0.58
SSBP3-214ENST00000533209 FAM53BQ14153 422 aa11.4□□□□□ -0.58
SSBP3-214ENST00000533209 SLC9A5Q14940 896 aa11.4□□□□□ -0.58
SSBP3-214ENST00000533209 NCF4Q15080 339 aa11.4□□□□□ -0.58
SSBP3-214ENST00000533209 NDUFA9Q16795 377 aa11.4□□□□□ -0.58
SSBP3-214ENST00000533209 ARHGAP40Q5TG30 622 aa11.4□□□□□ -0.58
SSBP3-214ENST00000533209 MRPL14Q6P1L8 145 aaKnown RBP11.4□□□□□ -0.58
SSBP3-214ENST00000533209 PRMT9Q6P2P2 845 aa11.4□□□□□ -0.58
SSBP3-214ENST00000533209 RPS27LQ71UM5 84 aaKnown RBP11.4□□□□□ -0.58
SSBP3-214ENST00000533209 SRRM1Q8IYB3 904 aaKnown RBP11.4□□□□□ -0.58
SSBP3-214ENST00000533209 ENDOVQ8N8Q3 282 aaKnown RBP11.4□□□□□ -0.58
SSBP3-214ENST00000533209 BANPQ8N9N5 519 aa11.4□□□□□ -0.58
SSBP3-214ENST00000533209 TRPV3Q8NET8 790 aa11.4□□□□□ -0.58
SSBP3-214ENST00000533209 NT5CQ8TCD5 201 aa11.4□□□□□ -0.58
SSBP3-214ENST00000533209 CREB3L4Q8TEY5 395 aa11.4□□□□□ -0.58
SSBP3-214ENST00000533209 STARD8Q92502 1023 aa11.4□□□□□ -0.58
SSBP3-214ENST00000533209 MVB12AQ96EY5 273 aa11.4□□□□□ -0.58
SSBP3-214ENST00000533209 NSUN5Q96P11 429 aaKnown RBP11.4□□□□□ -0.58
SSBP3-214ENST00000533209 C17orf62Q9BQA9 187 aa11.4□□□□□ -0.58
SSBP3-214ENST00000533209 C1QTNF3Q9BXJ4 246 aa11.4□□□□□ -0.58
SSBP3-214ENST00000533209 DRC3Q9H069 523 aa11.4□□□□□ -0.58
SSBP3-214ENST00000533209 ACTL8Q9H568 366 aa11.4□□□□□ -0.58
SSBP3-214ENST00000533209 IPPKQ9H8X2 491 aa11.4□□□□□ -0.58
SSBP3-214ENST00000533209 ZBTB26Q9HCK0 441 aa11.4□□□□□ -0.58
SSBP3-214ENST00000533209 MKS1Q9NXB0 559 aa11.4□□□□□ -0.58
SSBP3-214ENST00000533209 IFT80Q9P2H3 777 aaPredicted RBP11.4□□□□□ -0.58
SSBP3-214ENST00000533209 GRID1Q9ULK0 1009 aa11.4□□□□□ -0.58
SSBP3-214ENST00000533209 MAU2Q9Y6X3 613 aa11.4□□□□□ -0.58
SSBP3-214ENST00000533209 MDC1Q14676 2089 aaKnown RBP11.39□□□□□ -0.59
SSBP3-214ENST00000533209 A0A0A6YYC8 382 aaPredicted RBP11.39□□□□□ -0.59
SSBP3-214ENST00000533209 ZNF891A8MT65 544 aaPredicted RBP11.39□□□□□ -0.59
SSBP3-214ENST00000533209 G3V2L1 256 aa11.39□□□□□ -0.59
SSBP3-214ENST00000533209 I3L1I5 382 aaPredicted RBP11.39□□□□□ -0.59
SSBP3-214ENST00000533209 OR7A17O14581 309 aa11.39□□□□□ -0.59
SSBP3-214ENST00000533209 NKX2-8O15522 239 aa11.39□□□□□ -0.59
SSBP3-214ENST00000533209 NDUFS4O43181 175 aa11.39□□□□□ -0.59
SSBP3-214ENST00000533209 CREG1O75629 220 aa11.39□□□□□ -0.59
SSBP3-214ENST00000533209 KLF7O75840 302 aaPredicted RBP11.39□□□□□ -0.59
SSBP3-214ENST00000533209 SERPIND1P05546 499 aa11.39□□□□□ -0.59
SSBP3-214ENST00000533209 ATP5F1P24539 256 aaPredicted RBP11.39□□□□□ -0.59
SSBP3-214ENST00000533209 HERVK_113P63132 956 aa11.39□□□□□ -0.59
SSBP3-214ENST00000533209 LAPTM5Q13571 262 aa11.39□□□□□ -0.59
SSBP3-214ENST00000533209 CCDC153Q494R4 210 aa11.39□□□□□ -0.59
SSBP3-214ENST00000533209 PAGE2BQ5JRK9 111 aa11.39□□□□□ -0.59
SSBP3-214ENST00000533209 CEP85LQ5SZL2 805 aa11.39□□□□□ -0.59
SSBP3-214ENST00000533209 FAM69BQ5VUD6 431 aa11.39□□□□□ -0.59
SSBP3-214ENST00000533209 MLIPQ5VWP3 458 aa11.39□□□□□ -0.59
SSBP3-214ENST00000533209 ADNP2Q6IQ32 1131 aa11.39□□□□□ -0.59
SSBP3-214ENST00000533209 LRIG3Q6UXM1 1119 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms