RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 NKIRAS1Q9NYS0 192 aa10.73□□□□□ -0.69
TRAPPC4-211ENST00000533012 FOXJ2Q9P0K8 574 aa10.73□□□□□ -0.69
TRAPPC4-211ENST00000533012 DKK4Q9UBT3 224 aa10.73□□□□□ -0.69
TRAPPC4-211ENST00000533012 ZNF490Q9ULM2 529 aaPredicted RBP10.73□□□□□ -0.69
TRAPPC4-211ENST00000533012 SRPK3Q9UPE1 567 aa10.73□□□□□ -0.69
TRAPPC4-211ENST00000533012 RNF11Q9Y3C5 154 aa10.73□□□□□ -0.69
TRAPPC4-211ENST00000533012 TMEM184BQ9Y519 407 aaPredicted RBP10.73□□□□□ -0.69
TRAPPC4-211ENST00000533012 PCDHGA11Q9Y5H2 935 aa10.73□□□□□ -0.69
TRAPPC4-211ENST00000533012 PTPRBP23467 1997 aa10.72□□□□□ -0.69
TRAPPC4-211ENST00000533012 WDR91A4D1P6 747 aa10.72□□□□□ -0.69
TRAPPC4-211ENST00000533012 FITM1A5D6W6 292 aa10.72□□□□□ -0.69
TRAPPC4-211ENST00000533012 URADA6NGE7 173 aa10.72□□□□□ -0.69
TRAPPC4-211ENST00000533012 H3BQF6 201 aa10.72□□□□□ -0.69
TRAPPC4-211ENST00000533012 NDUFS4O43181 175 aa10.72□□□□□ -0.69
TRAPPC4-211ENST00000533012 KLK3P07288 261 aaPredicted RBP10.72□□□□□ -0.69
TRAPPC4-211ENST00000533012 PCNAP12004 261 aa10.72□□□□□ -0.69
TRAPPC4-211ENST00000533012 NEFHP12036 1026 aa10.72□□□□□ -0.69
TRAPPC4-211ENST00000533012 CD22P20273 847 aa10.72□□□□□ -0.69
TRAPPC4-211ENST00000533012 AGXTP21549 392 aa10.72□□□□□ -0.69
TRAPPC4-211ENST00000533012 SERPINB4P48594 390 aa10.72□□□□□ -0.69
TRAPPC4-211ENST00000533012 LCP2Q13094 533 aa10.72□□□□□ -0.69
TRAPPC4-211ENST00000533012 CPSF6Q16630 551 aaKnown RBP eCLIP10.72□□□□□ -0.69
TRAPPC4-211ENST00000533012 MUM1Q2TAK8 710 aa10.72□□□□□ -0.69
TRAPPC4-211ENST00000533012 HKDC1Q2TB90 917 aa10.72□□□□□ -0.69
TRAPPC4-211ENST00000533012 PRTGQ2VWP7 1150 aa10.72□□□□□ -0.69
TRAPPC4-211ENST00000533012 GARNL3Q5VVW2 1013 aa10.72□□□□□ -0.69
TRAPPC4-211ENST00000533012 TTC19Q6DKK2 380 aaPredicted RBP10.72□□□□□ -0.69
TRAPPC4-211ENST00000533012 GRHL2Q6ISB3 625 aa10.72□□□□□ -0.69
TRAPPC4-211ENST00000533012 RHBDD2Q6NTF9 364 aa10.72□□□□□ -0.69
TRAPPC4-211ENST00000533012 C6orf15Q6UXA7 325 aaPredicted RBP10.72□□□□□ -0.69
TRAPPC4-211ENST00000533012 VN1R4Q7Z5H5 301 aa10.72□□□□□ -0.69
TRAPPC4-211ENST00000533012 ZFAND4Q86XD8 727 aa10.72□□□□□ -0.69
TRAPPC4-211ENST00000533012 LAS2Q8IYD9 372 aa10.72□□□□□ -0.69
TRAPPC4-211ENST00000533012 ANKRD53Q8N9V6 530 aa10.72□□□□□ -0.69
TRAPPC4-211ENST00000533012 OR7G3Q8NG95 312 aa10.72□□□□□ -0.69
TRAPPC4-211ENST00000533012 OR4F6Q8NGB9 312 aa10.72□□□□□ -0.69
TRAPPC4-211ENST00000533012 PPP1R14CQ8TAE6 165 aa10.72□□□□□ -0.69
TRAPPC4-211ENST00000533012 ZNF382Q96SR6 550 aa10.72□□□□□ -0.69
TRAPPC4-211ENST00000533012 PAIP2Q9BPZ3 127 aaKnown RBP10.72□□□□□ -0.69
TRAPPC4-211ENST00000533012 TRMOQ9BU70 441 aa10.72□□□□□ -0.69
TRAPPC4-211ENST00000533012 MECRQ9BV79 373 aa10.72□□□□□ -0.69
TRAPPC4-211ENST00000533012 GATA5Q9BWX5 397 aaPredicted RBP10.72□□□□□ -0.69
TRAPPC4-211ENST00000533012 RHBGQ9H310 441 aa10.72□□□□□ -0.69
TRAPPC4-211ENST00000533012 GSTO2Q9H4Y5 243 aa10.72□□□□□ -0.69
TRAPPC4-211ENST00000533012 SYNPO2LQ9H987 977 aa10.72□□□□□ -0.69
TRAPPC4-211ENST00000533012 CUTCQ9NTM9 273 aa10.72□□□□□ -0.69
TRAPPC4-211ENST00000533012 TXLNGQ9NUQ3 528 aa10.72□□□□□ -0.69
TRAPPC4-211ENST00000533012 NDOR1Q9UHB4 597 aa10.72□□□□□ -0.69
TRAPPC4-211ENST00000533012 ADGRE2Q9UHX3 823 aa10.72□□□□□ -0.69
TRAPPC4-211ENST00000533012 ADAM21Q9UKJ8 722 aa10.72□□□□□ -0.69
TRAPPC4-211ENST00000533012 ACSL6Q9UKU0 697 aa10.72□□□□□ -0.69
TRAPPC4-211ENST00000533012 PADI1Q9ULC6 663 aa10.72□□□□□ -0.69
TRAPPC4-211ENST00000533012 RUVBL1Q9Y265 456 aaKnown RBP10.72□□□□□ -0.69
TRAPPC4-211ENST00000533012 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.71□□□□□ -0.69
TRAPPC4-211ENST00000533012 H0YIV9 168 aa10.71□□□□□ -0.69
TRAPPC4-211ENST00000533012 MEN1O00255 615 aa10.71□□□□□ -0.69
TRAPPC4-211ENST00000533012 PPP6CO00743 305 aa10.71□□□□□ -0.69
TRAPPC4-211ENST00000533012 RAD1O60671 282 aa10.71□□□□□ -0.69
TRAPPC4-211ENST00000533012 CLEC3AO75596 197 aa10.71□□□□□ -0.69
TRAPPC4-211ENST00000533012 STATHP02808 62 aa10.71□□□□□ -0.69
TRAPPC4-211ENST00000533012 SERPINA6P08185 405 aa10.71□□□□□ -0.69
TRAPPC4-211ENST00000533012 DHRS4L1P0CG22 281 aa10.71□□□□□ -0.69
TRAPPC4-211ENST00000533012 SERPINB1P30740 379 aa10.71□□□□□ -0.69
TRAPPC4-211ENST00000533012 HPDP32754 393 aaPredicted RBP10.71□□□□□ -0.69
TRAPPC4-211ENST00000533012 KNTC1P50748 2209 aa10.71□□□□□ -0.69
TRAPPC4-211ENST00000533012 PKNOX1P55347 436 aa10.71□□□□□ -0.69
TRAPPC4-211ENST00000533012 PCBP4P57723 403 aaKnown RBP10.71□□□□□ -0.69
TRAPPC4-211ENST00000533012 CYP4F2P78329 520 aa10.71□□□□□ -0.69
TRAPPC4-211ENST00000533012 PHEXP78562 749 aa10.71□□□□□ -0.69
TRAPPC4-211ENST00000533012 ABHD18Q0P651 414 aa10.71□□□□□ -0.69
TRAPPC4-211ENST00000533012 TRAF3Q13114 568 aa10.71□□□□□ -0.69
TRAPPC4-211ENST00000533012 MAP7Q14244 749 aa10.71□□□□□ -0.69
TRAPPC4-211ENST00000533012 ZRSR2Q15696 482 aaKnown RBP10.71□□□□□ -0.69
TRAPPC4-211ENST00000533012 TTMPQ5BVD1 217 aa10.71□□□□□ -0.69
TRAPPC4-211ENST00000533012 UNQ6494/PRO21346Q6UXR6 183 aa10.71□□□□□ -0.69
TRAPPC4-211ENST00000533012 FRMD7Q6ZUT3 714 aa10.71□□□□□ -0.69
TRAPPC4-211ENST00000533012 GPRIN3Q6ZVF9 776 aa10.71□□□□□ -0.69
TRAPPC4-211ENST00000533012 TTLL10Q6ZVT0 673 aa10.71□□□□□ -0.69
TRAPPC4-211ENST00000533012 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.71□□□□□ -0.69
TRAPPC4-211ENST00000533012 NLGN4XQ8N0W4 816 aa10.71□□□□□ -0.69
TRAPPC4-211ENST00000533012 ESX1Q8N693 406 aa10.71□□□□□ -0.69
TRAPPC4-211ENST00000533012 SLC38A9Q8NBW4 561 aa10.71□□□□□ -0.69
TRAPPC4-211ENST00000533012 GALNT6Q8NCL4 622 aa10.71□□□□□ -0.69
TRAPPC4-211ENST00000533012 ZNF248Q8NDW4 579 aa10.71□□□□□ -0.69
TRAPPC4-211ENST00000533012 NLGN4YQ8NFZ3 816 aaPredicted RBP10.71□□□□□ -0.69
TRAPPC4-211ENST00000533012 NT5CQ8TCD5 201 aa10.71□□□□□ -0.69
TRAPPC4-211ENST00000533012 PROKR1Q8TCW9 393 aa10.71□□□□□ -0.69
TRAPPC4-211ENST00000533012 MGARPQ8TDB4 240 aa10.71□□□□□ -0.69
TRAPPC4-211ENST00000533012 CREB3L4Q8TEY5 395 aa10.71□□□□□ -0.69
TRAPPC4-211ENST00000533012 CCT6BQ92526 530 aa10.71□□□□□ -0.69
TRAPPC4-211ENST00000533012 RNF31Q96EP0 1072 aa10.71□□□□□ -0.69
TRAPPC4-211ENST00000533012 LRFN5Q96NI6 719 aa10.71□□□□□ -0.69
TRAPPC4-211ENST00000533012 MACROD1Q9BQ69 325 aa10.71□□□□□ -0.69
TRAPPC4-211ENST00000533012 DPH2Q9BQC3 489 aaPredicted RBP10.71□□□□□ -0.69
TRAPPC4-211ENST00000533012 EML4Q9HC35 981 aaKnown RBP10.71□□□□□ -0.69
TRAPPC4-211ENST00000533012 MID1IP1Q9NPA3 183 aa10.71□□□□□ -0.69
TRAPPC4-211ENST00000533012 DHCR7Q9UBM7 475 aaKnown RBP10.71□□□□□ -0.69
TRAPPC4-211ENST00000533012 CDC14AQ9UNH5 594 aa10.71□□□□□ -0.69
TRAPPC4-211ENST00000533012 LRIT2A6NDA9 550 aa10.7□□□□□ -0.7
TRAPPC4-211ENST00000533012 C1QTNF9BB2RNN3 333 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms