RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 CYP1B1Q16678 543 aa16.11■□□□□ 0.17
RPUSD4-207ENST00000532800 PHKG1Q16816 387 aa16.11■□□□□ 0.17
RPUSD4-207ENST00000532800 ZNF766Q5HY98 468 aa16.11■□□□□ 0.17
RPUSD4-207ENST00000532800 RBM20Q5T481 1227 aaKnown RBP16.11■□□□□ 0.17
RPUSD4-207ENST00000532800 AGTRAPQ6RW13 159 aa16.11■□□□□ 0.17
RPUSD4-207ENST00000532800 ASPGQ86U10 573 aa16.11■□□□□ 0.17
RPUSD4-207ENST00000532800 SLC26A11Q86WA9 606 aa16.11■□□□□ 0.17
RPUSD4-207ENST00000532800 C17orf64Q86WR6 236 aa16.11■□□□□ 0.17
RPUSD4-207ENST00000532800 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.11■□□□□ 0.17
RPUSD4-207ENST00000532800 CAMKVQ8NCB2 501 aa16.11■□□□□ 0.17
RPUSD4-207ENST00000532800 DNAJB8Q8NHS0 232 aa16.11■□□□□ 0.17
RPUSD4-207ENST00000532800 MCOLN3Q8TDD5 553 aa16.11■□□□□ 0.17
RPUSD4-207ENST00000532800 THAP11Q96EK4 314 aa16.11■□□□□ 0.17
RPUSD4-207ENST00000532800 SIGLEC12Q96PQ1 595 aa16.11■□□□□ 0.17
RPUSD4-207ENST00000532800 FAM167BQ9BTA0 163 aa16.11■□□□□ 0.17
RPUSD4-207ENST00000532800 HES7Q9BYE0 225 aa16.11■□□□□ 0.17
RPUSD4-207ENST00000532800 KCNK13Q9HB14 408 aa16.11■□□□□ 0.17
RPUSD4-207ENST00000532800 ANKHQ9HCJ1 492 aa16.11■□□□□ 0.17
RPUSD4-207ENST00000532800 ANKRD10Q9NXR5 420 aa16.11■□□□□ 0.17
RPUSD4-207ENST00000532800 C19orf25Q9UFG5 118 aaPredicted RBP16.11■□□□□ 0.17
RPUSD4-207ENST00000532800 BANF1O75531 89 aa16.1■□□□□ 0.17
RPUSD4-207ENST00000532800 CDC123O75794 336 aaPredicted RBP16.1■□□□□ 0.17
RPUSD4-207ENST00000532800 CYC1P08574 325 aa16.1■□□□□ 0.17
RPUSD4-207ENST00000532800 GABRB3P28472 473 aa16.1■□□□□ 0.17
RPUSD4-207ENST00000532800 CA7P43166 264 aa16.1■□□□□ 0.17
RPUSD4-207ENST00000532800 CDKN2DP55273 166 aa16.1■□□□□ 0.17
RPUSD4-207ENST00000532800 TUBA3CQ13748 450 aa16.1■□□□□ 0.17
RPUSD4-207ENST00000532800 ZXDCQ2QGD7 858 aaPredicted RBP16.1■□□□□ 0.17
RPUSD4-207ENST00000532800 ACER2Q5QJU3 275 aa16.1■□□□□ 0.17
RPUSD4-207ENST00000532800 H3F3CQ6NXT2 135 aa16.1■□□□□ 0.17
RPUSD4-207ENST00000532800 TUBA3EQ6PEY2 450 aa16.1■□□□□ 0.17
RPUSD4-207ENST00000532800 PAQR3Q6TCH7 311 aa16.1■□□□□ 0.17
RPUSD4-207ENST00000532800 CRLF3Q8IUI8 442 aa16.1■□□□□ 0.17
RPUSD4-207ENST00000532800 LRRC8AQ8IWT6 810 aa16.1■□□□□ 0.17
RPUSD4-207ENST00000532800 MCEMP1Q8IX19 187 aa16.1■□□□□ 0.17
RPUSD4-207ENST00000532800 C2CD4AQ8NCU7 369 aaPredicted RBP16.1■□□□□ 0.17
RPUSD4-207ENST00000532800 OR5T3Q8NGG3 340 aa16.1■□□□□ 0.17
RPUSD4-207ENST00000532800 SLC13A3Q8WWT9 602 aa16.1■□□□□ 0.17
RPUSD4-207ENST00000532800 TSLPQ969D9 159 aa16.1■□□□□ 0.17
RPUSD4-207ENST00000532800 PEX11GQ96HA9 241 aa16.1■□□□□ 0.17
RPUSD4-207ENST00000532800 SGPP1Q9BX95 441 aa16.1■□□□□ 0.17
RPUSD4-207ENST00000532800 PCBD2Q9H0N5 130 aa16.1■□□□□ 0.17
RPUSD4-207ENST00000532800 KLHL1Q9NR64 748 aa16.1■□□□□ 0.17
RPUSD4-207ENST00000532800 SLC17A6Q9P2U8 582 aa16.1■□□□□ 0.17
RPUSD4-207ENST00000532800 SUCOQ9UBS9 1254 aaKnown RBP16.1■□□□□ 0.17
RPUSD4-207ENST00000532800 PPP2R2CQ9Y2T4 447 aa16.1■□□□□ 0.17
RPUSD4-207ENST00000532800 NAALAD2Q9Y3Q0 740 aa16.1■□□□□ 0.17
RPUSD4-207ENST00000532800 PCNX1Q96RV3 2341 aa16.1■□□□□ 0.17
RPUSD4-207ENST00000532800 C8GP07360 202 aa16.09■□□□□ 0.17
RPUSD4-207ENST00000532800 RGS4P49798 205 aa16.09■□□□□ 0.17
RPUSD4-207ENST00000532800 AGTR2P50052 363 aa16.09■□□□□ 0.17
RPUSD4-207ENST00000532800 PGGT1BP53609 377 aa16.09■□□□□ 0.17
RPUSD4-207ENST00000532800 MEF2AQ02078 507 aaPredicted RBP16.09■□□□□ 0.17
RPUSD4-207ENST00000532800 RHAGQ02094 409 aa16.09■□□□□ 0.17
RPUSD4-207ENST00000532800 DHX9Q08211 1270 aaKnown RBP16.09■□□□□ 0.17
RPUSD4-207ENST00000532800 SP140Q13342 867 aa16.09■□□□□ 0.17
RPUSD4-207ENST00000532800 ART3Q13508 389 aa16.09■□□□□ 0.17
RPUSD4-207ENST00000532800 CRYMQ14894 314 aa16.09■□□□□ 0.17
RPUSD4-207ENST00000532800 SFT2D3Q587I9 215 aa16.09■□□□□ 0.17
RPUSD4-207ENST00000532800 CAPN13Q6MZZ7 669 aaPredicted RBP16.09■□□□□ 0.17
RPUSD4-207ENST00000532800 PAPD4Q6PIY7 484 aaKnown RBP16.09■□□□□ 0.17
RPUSD4-207ENST00000532800 LCTLQ6UWM7 567 aa16.09■□□□□ 0.17
RPUSD4-207ENST00000532800 MRGPRGQ86SM5 289 aa16.09■□□□□ 0.17
RPUSD4-207ENST00000532800 MDS2Q8NDY4 140 aa16.09■□□□□ 0.17
RPUSD4-207ENST00000532800 PYCR2Q96C36 320 aa16.09■□□□□ 0.17
RPUSD4-207ENST00000532800 MOCOSQ96EN8 888 aa16.09■□□□□ 0.17
RPUSD4-207ENST00000532800 LINGO1Q96FE5 620 aa16.09■□□□□ 0.17
RPUSD4-207ENST00000532800 ZNF354BQ96LW1 612 aa16.09■□□□□ 0.17
RPUSD4-207ENST00000532800 PARVBQ9HBI1 364 aa16.09■□□□□ 0.17
RPUSD4-207ENST00000532800 LANCL2Q9NS86 450 aa16.09■□□□□ 0.17
RPUSD4-207ENST00000532800 OTOGQ6ZRI0 2925 aa16.09■□□□□ 0.17
RPUSD4-207ENST00000532800 CSMD2Q7Z408 3487 aa16.09■□□□□ 0.17
RPUSD4-207ENST00000532800 DNAJB6O75190 326 aa16.08■□□□□ 0.16
RPUSD4-207ENST00000532800 B3GALT4O96024 378 aa16.08■□□□□ 0.16
RPUSD4-207ENST00000532800 SLC35G6P0C7Q6 338 aa16.08■□□□□ 0.16
RPUSD4-207ENST00000532800 MYBL2P10244 700 aa16.08■□□□□ 0.16
RPUSD4-207ENST00000532800 NPPBP16860 134 aa16.08■□□□□ 0.16
RPUSD4-207ENST00000532800 PGAM1P18669 254 aa16.08■□□□□ 0.16
RPUSD4-207ENST00000532800 CD96P40200 585 aa16.08■□□□□ 0.16
RPUSD4-207ENST00000532800 NAA30Q147X3 362 aaPredicted RBP16.08■□□□□ 0.16
RPUSD4-207ENST00000532800 ABRAXAS2Q15018 415 aa16.08■□□□□ 0.16
RPUSD4-207ENST00000532800 C3AR1Q16581 482 aa16.08■□□□□ 0.16
RPUSD4-207ENST00000532800 RNASEH2BQ5TBB1 312 aaKnown RBP16.08■□□□□ 0.16
RPUSD4-207ENST00000532800 LRRC8EQ6NSJ5 796 aa16.08■□□□□ 0.16
RPUSD4-207ENST00000532800 UGT3A1Q6NUS8 523 aa16.08■□□□□ 0.16
RPUSD4-207ENST00000532800 PCGF5Q86SE9 256 aa16.08■□□□□ 0.16
RPUSD4-207ENST00000532800 PPIL6Q8IXY8 311 aa16.08■□□□□ 0.16
RPUSD4-207ENST00000532800 MYO1HQ8N1T3 1032 aa16.08■□□□□ 0.16
RPUSD4-207ENST00000532800 MFSD9Q8NBP5 474 aa16.08■□□□□ 0.16
RPUSD4-207ENST00000532800 M1APQ8TC57 530 aa16.08■□□□□ 0.16
RPUSD4-207ENST00000532800 PBKQ96KB5 322 aa16.08■□□□□ 0.16
RPUSD4-207ENST00000532800 TSPAN10Q9H1Z9 355 aaPredicted RBP16.08■□□□□ 0.16
RPUSD4-207ENST00000532800 MMP25Q9NPA2 562 aa16.08■□□□□ 0.16
RPUSD4-207ENST00000532800 TAS2R13Q9NYV9 303 aa16.08■□□□□ 0.16
RPUSD4-207ENST00000532800 TINAGQ9UJW2 476 aa16.08■□□□□ 0.16
RPUSD4-207ENST00000532800 KLF2Q9Y5W3 355 aaPredicted RBP16.08■□□□□ 0.16
RPUSD4-207ENST00000532800 DCHS2Q6V1P9 2916 aa16.08■□□□□ 0.16
RPUSD4-207ENST00000532800 NCOA6Q14686 2063 aaPredicted RBP16.07■□□□□ 0.16
RPUSD4-207ENST00000532800 FAM227AF5H4B4 570 aa16.07■□□□□ 0.16
RPUSD4-207ENST00000532800 PGRMC1O00264 195 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms