RNA–Protein interactions for RNA: ENST00000532538.1

BRPF3-210, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 4

Gene BRPF3, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-210ENST00000532538 SPNS2Q8IVW8 549 aa14.34□□□□□ -0.11
BRPF3-210ENST00000532538 SLC5A8Q8N695 610 aa14.34□□□□□ -0.11
BRPF3-210ENST00000532538 HORMAD2Q8N7B1 307 aa14.34□□□□□ -0.11
BRPF3-210ENST00000532538 TMEM178AQ8NBL3 297 aa14.34□□□□□ -0.11
BRPF3-210ENST00000532538 GIMAP7Q8NHV1 300 aa14.34□□□□□ -0.11
BRPF3-210ENST00000532538 SLC13A3Q8WWT9 602 aa14.34□□□□□ -0.11
BRPF3-210ENST00000532538 KCNJ9Q92806 393 aa14.34□□□□□ -0.11
BRPF3-210ENST00000532538 THAP11Q96EK4 314 aa14.34□□□□□ -0.11
BRPF3-210ENST00000532538 PEX11GQ96HA9 241 aa14.34□□□□□ -0.11
BRPF3-210ENST00000532538 HIST1H2AHQ96KK5 128 aa14.34□□□□□ -0.11
BRPF3-210ENST00000532538 LPAR4Q99677 370 aa14.34□□□□□ -0.11
BRPF3-210ENST00000532538 HIST1H2AJQ99878 128 aa14.34□□□□□ -0.11
BRPF3-210ENST00000532538 H2AFJQ9BTM1 129 aa14.34□□□□□ -0.11
BRPF3-210ENST00000532538 PCBD2Q9H0N5 130 aa14.34□□□□□ -0.11
BRPF3-210ENST00000532538 ATG10Q9H0Y0 220 aa14.34□□□□□ -0.11
BRPF3-210ENST00000532538 TINAGQ9UJW2 476 aa14.34□□□□□ -0.11
BRPF3-210ENST00000532538 NPIPA1Q9UND3 350 aa14.34□□□□□ -0.11
BRPF3-210ENST00000532538 COMMD10Q9Y6G5 202 aa14.34□□□□□ -0.11
BRPF3-210ENST00000532538 CACNA1CQ13936 2221 aa14.34□□□□□ -0.11
BRPF3-210ENST00000532538 ZNF860A6NHJ4 632 aa14.33□□□□□ -0.12
BRPF3-210ENST00000532538 GFYI3L273 518 aa14.33□□□□□ -0.12
BRPF3-210ENST00000532538 CCDC175P0C221 793 aa14.33□□□□□ -0.12
BRPF3-210ENST00000532538 CDC25BP30305 580 aa14.33□□□□□ -0.12
BRPF3-210ENST00000532538 PTGER4P35408 488 aa14.33□□□□□ -0.12
BRPF3-210ENST00000532538 OR4D2P58180 307 aa14.33□□□□□ -0.12
BRPF3-210ENST00000532538 MPP1Q00013 466 aa14.33□□□□□ -0.12
BRPF3-210ENST00000532538 TUBA3CQ13748 450 aa14.33□□□□□ -0.12
BRPF3-210ENST00000532538 ABRAXAS2Q15018 415 aa14.33□□□□□ -0.12
BRPF3-210ENST00000532538 MAPKAPK3Q16644 382 aa14.33□□□□□ -0.12
BRPF3-210ENST00000532538 ZNF630Q2M218 657 aaPredicted RBP14.33□□□□□ -0.12
BRPF3-210ENST00000532538 ANKRD22Q5VYY1 191 aa14.33□□□□□ -0.12
BRPF3-210ENST00000532538 SPINK14Q6IE38 97 aa14.33□□□□□ -0.12
BRPF3-210ENST00000532538 CAPN13Q6MZZ7 669 aaPredicted RBP14.33□□□□□ -0.12
BRPF3-210ENST00000532538 LRRC8EQ6NSJ5 796 aa14.33□□□□□ -0.12
BRPF3-210ENST00000532538 TUBA3EQ6PEY2 450 aa14.33□□□□□ -0.12
BRPF3-210ENST00000532538 VN1R4Q7Z5H5 301 aa14.33□□□□□ -0.12
BRPF3-210ENST00000532538 CAND1Q86VP6 1230 aaKnown RBP14.33□□□□□ -0.12
BRPF3-210ENST00000532538 SLC26A11Q86WA9 606 aa14.33□□□□□ -0.12
BRPF3-210ENST00000532538 CYP4X1Q8N118 509 aa14.33□□□□□ -0.12
BRPF3-210ENST00000532538 MYO1HQ8N1T3 1032 aa14.33□□□□□ -0.12
BRPF3-210ENST00000532538 TBC1D19Q8N5T2 526 aa14.33□□□□□ -0.12
BRPF3-210ENST00000532538 KCT2Q8NC54 265 aa14.33□□□□□ -0.12
BRPF3-210ENST00000532538 GABPB2Q8TAK5 448 aaPredicted RBP14.33□□□□□ -0.12
BRPF3-210ENST00000532538 CD200R1Q8TD46 325 aa14.33□□□□□ -0.12
BRPF3-210ENST00000532538 MAGOHBQ96A72 148 aaKnown RBP14.33□□□□□ -0.12
BRPF3-210ENST00000532538 CCDC138Q96M89 665 aa14.33□□□□□ -0.12
BRPF3-210ENST00000532538 SIGLEC12Q96PQ1 595 aa14.33□□□□□ -0.12
BRPF3-210ENST00000532538 HES7Q9BYE0 225 aa14.33□□□□□ -0.12
BRPF3-210ENST00000532538 XAB2Q9HCS7 855 aaKnown RBP14.33□□□□□ -0.12
BRPF3-210ENST00000532538 IARS2Q9NSE4 1012 aaKnown RBP14.33□□□□□ -0.12
BRPF3-210ENST00000532538 KLHL42Q9P2K6 505 aa14.33□□□□□ -0.12
BRPF3-210ENST00000532538 FBXO5Q9UKT4 447 aa14.33□□□□□ -0.12
BRPF3-210ENST00000532538 NAALAD2Q9Y3Q0 740 aa14.33□□□□□ -0.12
BRPF3-210ENST00000532538 GABRR3A8MPY1 467 aa14.32□□□□□ -0.12
BRPF3-210ENST00000532538 HAUS5O94927 633 aa14.32□□□□□ -0.12
BRPF3-210ENST00000532538 CYC1P08574 325 aa14.32□□□□□ -0.12
BRPF3-210ENST00000532538 CDH1P12830 882 aa14.32□□□□□ -0.12
BRPF3-210ENST00000532538 COILP38432 576 aaPredicted RBP14.32□□□□□ -0.12
BRPF3-210ENST00000532538 CD96P40200 585 aa14.32□□□□□ -0.12
BRPF3-210ENST00000532538 SKIV2L2P42285 1042 aaKnown RBP14.32□□□□□ -0.12
BRPF3-210ENST00000532538 EFNA3P52797 238 aa14.32□□□□□ -0.12
BRPF3-210ENST00000532538 SKP1P63208 163 aa14.32□□□□□ -0.12
BRPF3-210ENST00000532538 CSNK1G2P78368 415 aa14.32□□□□□ -0.12
BRPF3-210ENST00000532538 NAE1Q13564 534 aa14.32□□□□□ -0.12
BRPF3-210ENST00000532538 KRTCAP3Q53RY4 240 aa14.32□□□□□ -0.12
BRPF3-210ENST00000532538 ARMC3Q5W041 872 aa14.32□□□□□ -0.12
BRPF3-210ENST00000532538 TMEM214Q6NUQ4 689 aaKnown RBP14.32□□□□□ -0.12
BRPF3-210ENST00000532538 ZNF549Q6P9A3 640 aa14.32□□□□□ -0.12
BRPF3-210ENST00000532538 AGTRAPQ6RW13 159 aa14.32□□□□□ -0.12
BRPF3-210ENST00000532538 CYHR1Q6ZMK1 362 aa14.32□□□□□ -0.12
BRPF3-210ENST00000532538 MBOAT1Q6ZNC8 495 aa14.32□□□□□ -0.12
BRPF3-210ENST00000532538 GALNTL5Q7Z4T8 443 aa14.32□□□□□ -0.12
BRPF3-210ENST00000532538 LMNTD2Q8IXW0 634 aa14.32□□□□□ -0.12
BRPF3-210ENST00000532538 LRRC56Q8IYG6 542 aaPredicted RBP14.32□□□□□ -0.12
BRPF3-210ENST00000532538 ARHGEF39Q8N4T4 335 aa14.32□□□□□ -0.12
BRPF3-210ENST00000532538 TRIM58Q8NG06 486 aa14.32□□□□□ -0.12
BRPF3-210ENST00000532538 M1APQ8TC57 530 aa14.32□□□□□ -0.12
BRPF3-210ENST00000532538 NDNQ99608 321 aa14.32□□□□□ -0.12
BRPF3-210ENST00000532538 FAM167BQ9BTA0 163 aa14.32□□□□□ -0.12
BRPF3-210ENST00000532538 CDCP1Q9H5V8 836 aa14.32□□□□□ -0.12
BRPF3-210ENST00000532538 GPAMQ9HCL2 828 aa14.32□□□□□ -0.12
BRPF3-210ENST00000532538 NCOA6Q14686 2063 aaPredicted RBP14.32□□□□□ -0.12
BRPF3-210ENST00000532538 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.31□□□□□ -0.12
BRPF3-210ENST00000532538 KCNE1BA0A087WTH5 132 aa14.31□□□□□ -0.12
BRPF3-210ENST00000532538 NDC80O14777 642 aa14.31□□□□□ -0.12
BRPF3-210ENST00000532538 NDUFS4O43181 175 aa14.31□□□□□ -0.12
BRPF3-210ENST00000532538 OR1F1O43749 312 aa14.31□□□□□ -0.12
BRPF3-210ENST00000532538 C8GP07360 202 aa14.31□□□□□ -0.12
BRPF3-210ENST00000532538 MLNP12872 115 aa14.31□□□□□ -0.12
BRPF3-210ENST00000532538 CCND1P24385 295 aa14.31□□□□□ -0.12
BRPF3-210ENST00000532538 SNRPNP63162 240 aaKnown RBP14.31□□□□□ -0.12
BRPF3-210ENST00000532538 MEF2AQ02078 507 aaPredicted RBP14.31□□□□□ -0.12
BRPF3-210ENST00000532538 HSP90AA5PQ58FG0 334 aa14.31□□□□□ -0.12
BRPF3-210ENST00000532538 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.31□□□□□ -0.12
BRPF3-210ENST00000532538 SPPL2CQ8IUH8 684 aa14.31□□□□□ -0.12
BRPF3-210ENST00000532538 SHISA5Q8N114 240 aa14.31□□□□□ -0.12
BRPF3-210ENST00000532538 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.31□□□□□ -0.12
BRPF3-210ENST00000532538 EEF1AKMT1Q8WVE0 214 aa14.31□□□□□ -0.12
BRPF3-210ENST00000532538 GPR137Q96N19 417 aa14.31□□□□□ -0.12
BRPF3-210ENST00000532538 SERPINB12Q96P63 405 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms