RNA–Protein interactions for RNA: ENST00000531504.5

HIPK3-205, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 2

Gene HIPK3, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-205ENST00000531504 RPA3P35244 121 aaPredicted RBP18.66■□□□□ 0.58
HIPK3-205ENST00000531504 YBX1P67809 324 aaKnown RBP18.66■□□□□ 0.58
HIPK3-205ENST00000531504 CKAP4Q07065 602 aaKnown RBP18.66■□□□□ 0.58
HIPK3-205ENST00000531504 FOXD4Q12950 439 aaPredicted RBP18.66■□□□□ 0.58
HIPK3-205ENST00000531504 KLF1Q13351 362 aaPredicted RBP18.66■□□□□ 0.58
HIPK3-205ENST00000531504 PTRHD1Q6GMV3 140 aaKnown RBP18.66■□□□□ 0.58
HIPK3-205ENST00000531504 OTOAQ7RTW8 1153 aa18.66■□□□□ 0.58
HIPK3-205ENST00000531504 MARVELD2Q8N4S9 558 aa18.66■□□□□ 0.58
HIPK3-205ENST00000531504 ARHGEF39Q8N4T4 335 aa18.66■□□□□ 0.58
HIPK3-205ENST00000531504 CPSF7Q8N684 471 aaKnown RBP18.66■□□□□ 0.58
HIPK3-205ENST00000531504 OR6P1Q8NGX9 317 aa18.66■□□□□ 0.58
HIPK3-205ENST00000531504 MCOLN3Q8TDD5 553 aa18.66■□□□□ 0.58
HIPK3-205ENST00000531504 OR2A5Q96R48 311 aa18.66■□□□□ 0.58
HIPK3-205ENST00000531504 NPAS2Q99743 824 aa18.66■□□□□ 0.58
HIPK3-205ENST00000531504 FAM118BQ9BPY3 351 aa18.66■□□□□ 0.58
HIPK3-205ENST00000531504 TP63Q9H3D4 680 aaPredicted RBP18.66■□□□□ 0.58
HIPK3-205ENST00000531504 DNAJB12Q9NXW2 375 aaKnown RBP18.66■□□□□ 0.58
HIPK3-205ENST00000531504 ANAPC5Q9UJX4 755 aa18.66■□□□□ 0.58
HIPK3-205ENST00000531504 KRT87PA6NCN2 255 aa18.65■□□□□ 0.58
HIPK3-205ENST00000531504 PTGER1P34995 402 aa18.65■□□□□ 0.58
HIPK3-205ENST00000531504 ST13P50502 369 aaKnown RBP18.65■□□□□ 0.58
HIPK3-205ENST00000531504 PRAMEP78395 509 aa18.65■□□□□ 0.58
HIPK3-205ENST00000531504 RELAQ04206 551 aa18.65■□□□□ 0.58
HIPK3-205ENST00000531504 RNFT1Q5M7Z0 435 aa18.65■□□□□ 0.58
HIPK3-205ENST00000531504 ANKRD37Q7Z713 158 aa18.65■□□□□ 0.58
HIPK3-205ENST00000531504 SMPDL3AQ92484 453 aa18.65■□□□□ 0.58
HIPK3-205ENST00000531504 TMEM125Q96AQ2 219 aa18.65■□□□□ 0.58
HIPK3-205ENST00000531504 LPAR4Q99677 370 aa18.65■□□□□ 0.58
HIPK3-205ENST00000531504 UCK2Q9BZX2 261 aa18.65■□□□□ 0.58
HIPK3-205ENST00000531504 GSX1Q9H4S2 264 aaPredicted RBP18.65■□□□□ 0.58
HIPK3-205ENST00000531504 PCYOX1Q9UHG3 505 aa18.65■□□□□ 0.58
HIPK3-205ENST00000531504 RIMKLBQ9ULI2 386 aa18.65■□□□□ 0.58
HIPK3-205ENST00000531504 A0A1B0GTH9 108 aa18.64■□□□□ 0.57
HIPK3-205ENST00000531504 TCRBV7S2A1N4TA0A589 114 aa18.64■□□□□ 0.57
HIPK3-205ENST00000531504 MAN1A2O60476 641 aa18.64■□□□□ 0.57
HIPK3-205ENST00000531504 METTL18O95568 372 aa18.64■□□□□ 0.57
HIPK3-205ENST00000531504 TTPAP49638 278 aa18.64■□□□□ 0.57
HIPK3-205ENST00000531504 CDH17Q12864 832 aa18.64■□□□□ 0.57
HIPK3-205ENST00000531504 CEBPEQ15744 281 aa18.64■□□□□ 0.57
HIPK3-205ENST00000531504 ZNF425Q6IV72 752 aa18.64■□□□□ 0.57
HIPK3-205ENST00000531504 PAPD4Q6PIY7 484 aaKnown RBP18.64■□□□□ 0.57
HIPK3-205ENST00000531504 MYRIPQ8NFW9 859 aa18.64■□□□□ 0.57
HIPK3-205ENST00000531504 OR9A4Q8NGU2 314 aa18.64■□□□□ 0.57
HIPK3-205ENST00000531504 SYNPO2LQ9H987 977 aa18.64■□□□□ 0.57
HIPK3-205ENST00000531504 L2HGDHQ9H9P8 463 aa18.64■□□□□ 0.57
HIPK3-205ENST00000531504 DLL4Q9NR61 685 aa18.64■□□□□ 0.57
HIPK3-205ENST00000531504 ST6GALNAC2Q9UJ37 374 aa18.64■□□□□ 0.57
HIPK3-205ENST00000531504 RUVBL2Q9Y230 463 aaKnown RBP18.64■□□□□ 0.57
HIPK3-205ENST00000531504 DNHD1Q96M86 4753 aa18.63■□□□□ 0.57
HIPK3-205ENST00000531504 NDC80O14777 642 aa18.63■□□□□ 0.57
HIPK3-205ENST00000531504 PRMT3O60678 531 aa18.63■□□□□ 0.57
HIPK3-205ENST00000531504 NSA2O95478 260 aaKnown RBP18.63■□□□□ 0.57
HIPK3-205ENST00000531504 XCR1P46094 333 aa18.63■□□□□ 0.57
HIPK3-205ENST00000531504 CYB561P49447 251 aa18.63■□□□□ 0.57
HIPK3-205ENST00000531504 ACTN3Q08043 901 aaPredicted RBP18.63■□□□□ 0.57
HIPK3-205ENST00000531504 TSTA3Q13630 321 aaPredicted RBP18.63■□□□□ 0.57
HIPK3-205ENST00000531504 SEMA3AQ14563 771 aa18.63■□□□□ 0.57
HIPK3-205ENST00000531504 SIX1Q15475 284 aaPredicted RBP18.63■□□□□ 0.57
HIPK3-205ENST00000531504 TSTD2Q5T7W7 516 aa18.63■□□□□ 0.57
HIPK3-205ENST00000531504 SUSD1Q6UWL2 747 aa18.63■□□□□ 0.57
HIPK3-205ENST00000531504 ACAD11Q709F0 780 aa18.63■□□□□ 0.57
HIPK3-205ENST00000531504 ZNF534Q76KX8 674 aa18.63■□□□□ 0.57
HIPK3-205ENST00000531504 OR51Q1Q8NH59 317 aa18.63■□□□□ 0.57
HIPK3-205ENST00000531504 SLC2A6Q9UGQ3 507 aa18.63■□□□□ 0.57
HIPK3-205ENST00000531504 KLF13Q9Y2Y9 288 aaPredicted RBP18.63■□□□□ 0.57
HIPK3-205ENST00000531504 AKAP6Q13023 2319 aa18.63■□□□□ 0.57
HIPK3-205ENST00000531504 PHF3Q92576 2039 aaKnown RBP18.62■□□□□ 0.57
HIPK3-205ENST00000531504 IGKV1-8A0A0C4DH67 115 aa18.62■□□□□ 0.57
HIPK3-205ENST00000531504 GOLGA6L10A0A0M3HER8 536 aa18.62■□□□□ 0.57
HIPK3-205ENST00000531504 FAM237BA0A1B0GVD1 139 aa18.62■□□□□ 0.57
HIPK3-205ENST00000531504 ZNF839A8K0R7 811 aa18.62■□□□□ 0.57
HIPK3-205ENST00000531504 P2RX6O15547 441 aa18.62■□□□□ 0.57
HIPK3-205ENST00000531504 CDC40O60508 579 aaKnown RBP eCLIP18.62■□□□□ 0.57
HIPK3-205ENST00000531504 ERGP11308 486 aa18.62■□□□□ 0.57
HIPK3-205ENST00000531504 ACVR1Q04771 509 aa18.62■□□□□ 0.57
HIPK3-205ENST00000531504 PRDX1Q06830 199 aaKnown RBP18.62■□□□□ 0.57
HIPK3-205ENST00000531504 ARHGAP19Q14CB8 494 aa18.62■□□□□ 0.57
HIPK3-205ENST00000531504 ANKRD20A4Q4UJ75 823 aa18.62■□□□□ 0.57
HIPK3-205ENST00000531504 SFT2D3Q587I9 215 aa18.62■□□□□ 0.57
HIPK3-205ENST00000531504 ICE2Q659A1 982 aa18.62■□□□□ 0.57
HIPK3-205ENST00000531504 TAOK1Q7L7X3 1001 aa18.62■□□□□ 0.57
HIPK3-205ENST00000531504 ZNF572Q7Z3I7 529 aaPredicted RBP18.62■□□□□ 0.57
HIPK3-205ENST00000531504 ADCK2Q7Z695 626 aa18.62■□□□□ 0.57
HIPK3-205ENST00000531504 PCGF5Q86SE9 256 aa18.62■□□□□ 0.57
HIPK3-205ENST00000531504 RPS19BP1Q86WX3 136 aaKnown RBP18.62■□□□□ 0.57
HIPK3-205ENST00000531504 FAM71DQ8N9W8 422 aa18.62■□□□□ 0.57
HIPK3-205ENST00000531504 MNS1Q8NEH6 495 aa18.62■□□□□ 0.57
HIPK3-205ENST00000531504 OR52K1Q8NGK4 314 aa18.62■□□□□ 0.57
HIPK3-205ENST00000531504 OR9A1PQ8NGU1 263 aa18.62■□□□□ 0.57
HIPK3-205ENST00000531504 EBNA1BP2Q99848 306 aaKnown RBP18.62■□□□□ 0.57
HIPK3-205ENST00000531504 POLDIP3Q9BY77 421 aaKnown RBP18.62■□□□□ 0.57
HIPK3-205ENST00000531504 FRMD8P1Q9BZ68 369 aaPredicted RBP18.62■□□□□ 0.57
HIPK3-205ENST00000531504 CDCP1Q9H5V8 836 aa18.62■□□□□ 0.57
HIPK3-205ENST00000531504 CATSPERZQ9NTU4 200 aa18.62■□□□□ 0.57
HIPK3-205ENST00000531504 TAC3Q9UHF0 121 aa18.62■□□□□ 0.57
HIPK3-205ENST00000531504 RPH3AQ9Y2J0 694 aaPredicted RBP18.62■□□□□ 0.57
HIPK3-205ENST00000531504 ERI2A8K979 691 aaKnown RBP18.61■□□□□ 0.57
HIPK3-205ENST00000531504 KLK8O60259 260 aa18.61■□□□□ 0.57
HIPK3-205ENST00000531504 DNASE1P24855 282 aa18.61■□□□□ 0.57
HIPK3-205ENST00000531504 LTBQ06643 244 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms