RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 CSNK1G2P78368 415 aa17.37■□□□□ 0.37
SSSCA1-206ENST00000531405 MPP1Q00013 466 aa17.37■□□□□ 0.37
SSSCA1-206ENST00000531405 PTK6Q13882 451 aa17.37■□□□□ 0.37
SSSCA1-206ENST00000531405 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.37■□□□□ 0.37
SSSCA1-206ENST00000531405 MTFR2Q6P444 385 aa17.37■□□□□ 0.37
SSSCA1-206ENST00000531405 RPTNQ6XPR3 784 aa17.37■□□□□ 0.37
SSSCA1-206ENST00000531405 GDF7Q7Z4P5 450 aa17.37■□□□□ 0.37
SSSCA1-206ENST00000531405 AGGF1Q8N302 714 aaeCLIP17.37■□□□□ 0.37
SSSCA1-206ENST00000531405 MDS2Q8NDY4 140 aa17.37■□□□□ 0.37
SSSCA1-206ENST00000531405 MCOLN3Q8TDD5 553 aa17.37■□□□□ 0.37
SSSCA1-206ENST00000531405 ZNF354BQ96LW1 612 aa17.37■□□□□ 0.37
SSSCA1-206ENST00000531405 KLHL42Q9P2K6 505 aa17.37■□□□□ 0.37
SSSCA1-206ENST00000531405 ADAMTS6Q9UKP5 1117 aa17.37■□□□□ 0.37
SSSCA1-206ENST00000531405 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.36■□□□□ 0.37
SSSCA1-206ENST00000531405 KCNE1BA0A087WTH5 132 aa17.36■□□□□ 0.37
SSSCA1-206ENST00000531405 ZNF860A6NHJ4 632 aa17.36■□□□□ 0.37
SSSCA1-206ENST00000531405 ZNHIT1O43257 154 aa17.36■□□□□ 0.37
SSSCA1-206ENST00000531405 LCMT2O60294 686 aaKnown RBP17.36■□□□□ 0.37
SSSCA1-206ENST00000531405 CDC123O75794 336 aaPredicted RBP17.36■□□□□ 0.37
SSSCA1-206ENST00000531405 HAUS5O94927 633 aa17.36■□□□□ 0.37
SSSCA1-206ENST00000531405 KRT14P02533 472 aa17.36■□□□□ 0.37
SSSCA1-206ENST00000531405 COX6B1P14854 86 aa17.36■□□□□ 0.37
SSSCA1-206ENST00000531405 CD96P40200 585 aa17.36■□□□□ 0.37
SSSCA1-206ENST00000531405 CASP6P55212 293 aa17.36■□□□□ 0.37
SSSCA1-206ENST00000531405 CDSNQ15517 529 aa17.36■□□□□ 0.37
SSSCA1-206ENST00000531405 OR1C1Q15619 314 aa17.36■□□□□ 0.37
SSSCA1-206ENST00000531405 ZXDCQ2QGD7 858 aaPredicted RBP17.36■□□□□ 0.37
SSSCA1-206ENST00000531405 SFT2D3Q587I9 215 aa17.36■□□□□ 0.37
SSSCA1-206ENST00000531405 SPINK14Q6IE38 97 aa17.36■□□□□ 0.37
SSSCA1-206ENST00000531405 TTC27Q6P3X3 843 aa17.36■□□□□ 0.37
SSSCA1-206ENST00000531405 SLC26A11Q86WA9 606 aa17.36■□□□□ 0.37
SSSCA1-206ENST00000531405 ALKBH8Q96BT7 664 aaKnown RBP17.36■□□□□ 0.37
SSSCA1-206ENST00000531405 TM4SF19Q96DZ7 209 aa17.36■□□□□ 0.37
SSSCA1-206ENST00000531405 ATG10Q9H0Y0 220 aa17.36■□□□□ 0.37
SSSCA1-206ENST00000531405 ANKHQ9HCJ1 492 aa17.36■□□□□ 0.37
SSSCA1-206ENST00000531405 CHST11Q9NPF2 352 aa17.36■□□□□ 0.37
SSSCA1-206ENST00000531405 C20orf96Q9NUD7 363 aaPredicted RBP17.36■□□□□ 0.37
SSSCA1-206ENST00000531405 SDR42E2A6NKP2 422 aa17.35■□□□□ 0.37
SSSCA1-206ENST00000531405 TTI1O43156 1089 aa17.35■□□□□ 0.37
SSSCA1-206ENST00000531405 CYC1P08574 325 aa17.35■□□□□ 0.37
SSSCA1-206ENST00000531405 HRH2P25021 359 aa17.35■□□□□ 0.37
SSSCA1-206ENST00000531405 PTGER4P35408 488 aa17.35■□□□□ 0.37
SSSCA1-206ENST00000531405 AGTR2P50052 363 aa17.35■□□□□ 0.37
SSSCA1-206ENST00000531405 ABRAXAS2Q15018 415 aa17.35■□□□□ 0.37
SSSCA1-206ENST00000531405 MEP1AQ16819 746 aa17.35■□□□□ 0.37
SSSCA1-206ENST00000531405 ARMC3Q5W041 872 aa17.35■□□□□ 0.37
SSSCA1-206ENST00000531405 PAPD4Q6PIY7 484 aaKnown RBP17.35■□□□□ 0.37
SSSCA1-206ENST00000531405 NCCRP1Q6ZVX7 275 aaPredicted RBP17.35■□□□□ 0.37
SSSCA1-206ENST00000531405 CAMKVQ8NCB2 501 aa17.35■□□□□ 0.37
SSSCA1-206ENST00000531405 OR5T3Q8NGG3 340 aa17.35■□□□□ 0.37
SSSCA1-206ENST00000531405 TSLPQ969D9 159 aa17.35■□□□□ 0.37
SSSCA1-206ENST00000531405 PEX11GQ96HA9 241 aa17.35■□□□□ 0.37
SSSCA1-206ENST00000531405 MAGED4Q96JG8 741 aa17.35■□□□□ 0.37
SSSCA1-206ENST00000531405 LURAP1Q96LR2 239 aa17.35■□□□□ 0.37
SSSCA1-206ENST00000531405 GPR137Q96N19 417 aa17.35■□□□□ 0.37
SSSCA1-206ENST00000531405 SERPINB12Q96P63 405 aa17.35■□□□□ 0.37
SSSCA1-206ENST00000531405 UTP23Q9BRU9 249 aaKnown RBP17.35■□□□□ 0.37
SSSCA1-206ENST00000531405 AARSD1Q9BTE6 412 aaKnown RBP17.35■□□□□ 0.37
SSSCA1-206ENST00000531405 TRIM8Q9BZR9 551 aa17.35■□□□□ 0.37
SSSCA1-206ENST00000531405 PDE10AQ9Y233 779 aa17.35■□□□□ 0.37
SSSCA1-206ENST00000531405 NAALAD2Q9Y3Q0 740 aa17.35■□□□□ 0.37
SSSCA1-206ENST00000531405 MED13LQ71F56 2210 aa17.35■□□□□ 0.37
SSSCA1-206ENST00000531405 NPIPA5E9PKD4 350 aa17.34■□□□□ 0.37
SSSCA1-206ENST00000531405 C19orf84I3L1E1 186 aa17.34■□□□□ 0.37
SSSCA1-206ENST00000531405 ESRRAP11474 423 aaPredicted RBP17.34■□□□□ 0.37
SSSCA1-206ENST00000531405 CDH1P12830 882 aa17.34■□□□□ 0.37
SSSCA1-206ENST00000531405 MLNP12872 115 aa17.34■□□□□ 0.37
SSSCA1-206ENST00000531405 RHAGQ02094 409 aa17.34■□□□□ 0.37
SSSCA1-206ENST00000531405 ALDH6A1Q02252 535 aaKnown RBP17.34■□□□□ 0.37
SSSCA1-206ENST00000531405 EXT1Q16394 746 aa17.34■□□□□ 0.37
SSSCA1-206ENST00000531405 XKRXQ6PP77 449 aa17.34■□□□□ 0.37
SSSCA1-206ENST00000531405 ASPGQ86U10 573 aa17.34■□□□□ 0.37
SSSCA1-206ENST00000531405 C17orf64Q86WR6 236 aa17.34■□□□□ 0.37
SSSCA1-206ENST00000531405 M1APQ8TC57 530 aa17.34■□□□□ 0.37
SSSCA1-206ENST00000531405 ADAMTS18Q8TE60 1221 aa17.34■□□□□ 0.37
SSSCA1-206ENST00000531405 EEF1AKMT1Q8WVE0 214 aa17.34■□□□□ 0.37
SSSCA1-206ENST00000531405 SLC13A3Q8WWT9 602 aa17.34■□□□□ 0.37
SSSCA1-206ENST00000531405 THAP11Q96EK4 314 aa17.34■□□□□ 0.37
SSSCA1-206ENST00000531405 SCMH1Q96GD3 660 aa17.34■□□□□ 0.37
SSSCA1-206ENST00000531405 NDNQ99608 321 aa17.34■□□□□ 0.37
SSSCA1-206ENST00000531405 MMP25Q9NPA2 562 aa17.34■□□□□ 0.37
SSSCA1-206ENST00000531405 HOMER3Q9NSC5 361 aa17.34■□□□□ 0.37
SSSCA1-206ENST00000531405 FBXO5Q9UKT4 447 aa17.34■□□□□ 0.37
SSSCA1-206ENST00000531405 NPIPA1Q9UND3 350 aa17.34■□□□□ 0.37
SSSCA1-206ENST00000531405 PCDHGB6Q9Y5F9 930 aa17.34■□□□□ 0.37
SSSCA1-206ENST00000531405 MAD1L1Q9Y6D9 718 aa17.34■□□□□ 0.37
SSSCA1-206ENST00000531405 SETD2Q9BYW2 2564 aaPredicted RBP17.34■□□□□ 0.37
SSSCA1-206ENST00000531405 MAGEB16A2A368 324 aa17.33■□□□□ 0.36
SSSCA1-206ENST00000531405 GABRR3A8MPY1 467 aa17.33■□□□□ 0.36
SSSCA1-206ENST00000531405 DNAJB6O75190 326 aa17.33■□□□□ 0.36
SSSCA1-206ENST00000531405 EEF1DP29692 281 aaKnown RBP17.33■□□□□ 0.36
SSSCA1-206ENST00000531405 TIAL1Q01085 375 aaKnown RBP eCLIP17.33■□□□□ 0.36
SSSCA1-206ENST00000531405 MEF2AQ02078 507 aaPredicted RBP17.33■□□□□ 0.36
SSSCA1-206ENST00000531405 ACTN3Q08043 901 aaPredicted RBP17.33■□□□□ 0.36
SSSCA1-206ENST00000531405 NAE1Q13564 534 aa17.33■□□□□ 0.36
SSSCA1-206ENST00000531405 USP10Q14694 798 aaKnown RBP17.33■□□□□ 0.36
SSSCA1-206ENST00000531405 NSDHLQ15738 373 aa17.33■□□□□ 0.36
SSSCA1-206ENST00000531405 HSP90AA5PQ58FG0 334 aa17.33■□□□□ 0.36
SSSCA1-206ENST00000531405 CAPN13Q6MZZ7 669 aaPredicted RBP17.33■□□□□ 0.36
SSSCA1-206ENST00000531405 AGTRAPQ6RW13 159 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms