RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 SKOR2Q2VWA4 1001 aaPredicted RBP17.79■□□□□ 0.44
SSRP1-204ENST00000529002 C11orf63Q6NUN7 778 aa17.79■□□□□ 0.44
SSRP1-204ENST00000529002 PDSS2Q86YH6 399 aa17.79■□□□□ 0.44
SSRP1-204ENST00000529002 PANX3Q96QZ0 392 aa17.79■□□□□ 0.44
SSRP1-204ENST00000529002 LPAR4Q99677 370 aa17.79■□□□□ 0.44
SSRP1-204ENST00000529002 TP63Q9H3D4 680 aaPredicted RBP17.79■□□□□ 0.44
SSRP1-204ENST00000529002 EFR3BQ9Y2G0 817 aa17.79■□□□□ 0.44
SSRP1-204ENST00000529002 L3MBTL1Q9Y468 752 aa17.79■□□□□ 0.44
SSRP1-204ENST00000529002 FAM237BA0A1B0GVD1 139 aa17.78■□□□□ 0.44
SSRP1-204ENST00000529002 H7BY64 318 aa17.78■□□□□ 0.44
SSRP1-204ENST00000529002 TXNDC9O14530 226 aa17.78■□□□□ 0.44
SSRP1-204ENST00000529002 DNAJB6O75190 326 aa17.78■□□□□ 0.44
SSRP1-204ENST00000529002 NIPSNAP2O75323 286 aa17.78■□□□□ 0.44
SSRP1-204ENST00000529002 PKMP14618 531 aaKnown RBP17.78■□□□□ 0.44
SSRP1-204ENST00000529002 P3H1Q32P28 736 aa17.78■□□□□ 0.44
SSRP1-204ENST00000529002 ANKRD20A4Q4UJ75 823 aa17.78■□□□□ 0.44
SSRP1-204ENST00000529002 TMEM198Q66K66 360 aa17.78■□□□□ 0.44
SSRP1-204ENST00000529002 MAGEC3Q8TD91 643 aa17.78■□□□□ 0.44
SSRP1-204ENST00000529002 ELP5Q8TE02 316 aa17.78■□□□□ 0.44
SSRP1-204ENST00000529002 ALG3Q92685 438 aa17.78■□□□□ 0.44
SSRP1-204ENST00000529002 PEX11GQ96HA9 241 aa17.78■□□□□ 0.44
SSRP1-204ENST00000529002 PRAP1Q96NZ9 151 aa17.78■□□□□ 0.44
SSRP1-204ENST00000529002 DEFB127Q9H1M4 99 aa17.78■□□□□ 0.44
SSRP1-204ENST00000529002 LANCL2Q9NS86 450 aa17.78■□□□□ 0.44
SSRP1-204ENST00000529002 ANAPC5Q9UJX4 755 aa17.78■□□□□ 0.44
SSRP1-204ENST00000529002 TCAF1Q9Y4C2 921 aa17.78■□□□□ 0.44
SSRP1-204ENST00000529002 PCDHA3Q9Y5H8 950 aa17.78■□□□□ 0.44
SSRP1-204ENST00000529002 MRFAP1Q9Y605 127 aa17.78■□□□□ 0.44
SSRP1-204ENST00000529002 CSPG4Q6UVK1 2322 aa17.78■□□□□ 0.44
SSRP1-204ENST00000529002 NSD1Q96L73 2696 aaPredicted RBP17.77■□□□□ 0.44
SSRP1-204ENST00000529002 USP27XA6NNY8 438 aa17.77■□□□□ 0.44
SSRP1-204ENST00000529002 CD3EAPO15446 510 aaKnown RBP17.77■□□□□ 0.44
SSRP1-204ENST00000529002 PSMD3O43242 534 aa17.77■□□□□ 0.44
SSRP1-204ENST00000529002 PRMT3O60678 531 aa17.77■□□□□ 0.44
SSRP1-204ENST00000529002 MFAP3LO75121 409 aa17.77■□□□□ 0.44
SSRP1-204ENST00000529002 FOSL1P15407 271 aa17.77■□□□□ 0.44
SSRP1-204ENST00000529002 ADRA1DP25100 572 aa17.77■□□□□ 0.44
SSRP1-204ENST00000529002 PTPN7P35236 360 aa17.77■□□□□ 0.44
SSRP1-204ENST00000529002 PPARGP37231 505 aaPredicted RBP17.77■□□□□ 0.44
SSRP1-204ENST00000529002 PNLIPRP1P54315 467 aa17.77■□□□□ 0.44
SSRP1-204ENST00000529002 OR4D2P58180 307 aa17.77■□□□□ 0.44
SSRP1-204ENST00000529002 MLF1P58340 268 aa17.77■□□□□ 0.44
SSRP1-204ENST00000529002 ACSBG2Q5FVE4 666 aa17.77■□□□□ 0.44
SSRP1-204ENST00000529002 PPP1R21Q6ZMI0 780 aa17.77■□□□□ 0.44
SSRP1-204ENST00000529002 LINC00523Q86TU6 105 aa17.77■□□□□ 0.44
SSRP1-204ENST00000529002 KCT2Q8NC54 265 aa17.77■□□□□ 0.44
SSRP1-204ENST00000529002 WFDC11Q8NEX6 87 aa17.77■□□□□ 0.44
SSRP1-204ENST00000529002 OR5T3Q8NGG3 340 aa17.77■□□□□ 0.44
SSRP1-204ENST00000529002 RIMKLBQ9ULI2 386 aa17.77■□□□□ 0.44
SSRP1-204ENST00000529002 GTF3C3Q9Y5Q9 886 aa17.77■□□□□ 0.44
SSRP1-204ENST00000529002 ARHGAP21Q5T5U3 1957 aa17.77■□□□□ 0.43
SSRP1-204ENST00000529002 KIAA1324LA8MWY0 1029 aaPredicted RBP17.76■□□□□ 0.43
SSRP1-204ENST00000529002 GOLGA6L22H0YM25 854 aa17.76■□□□□ 0.43
SSRP1-204ENST00000529002 MYO1CO00159 1063 aa17.76■□□□□ 0.43
SSRP1-204ENST00000529002 SMAPO00193 183 aa17.76■□□□□ 0.43
SSRP1-204ENST00000529002 PEX1O43933 1283 aa17.76■□□□□ 0.43
SSRP1-204ENST00000529002 SLC16A8O95907 504 aa17.76■□□□□ 0.43
SSRP1-204ENST00000529002 CYC1P08574 325 aa17.76■□□□□ 0.43
SSRP1-204ENST00000529002 DNASE1P24855 282 aa17.76■□□□□ 0.43
SSRP1-204ENST00000529002 FMO4P31512 558 aa17.76■□□□□ 0.43
SSRP1-204ENST00000529002 GBX1Q14549 363 aa17.76■□□□□ 0.43
SSRP1-204ENST00000529002 KCNJ11Q14654 390 aa17.76■□□□□ 0.43
SSRP1-204ENST00000529002 TYSND1Q2T9J0 566 aa17.76■□□□□ 0.43
SSRP1-204ENST00000529002 PRUNE1Q86TP1 453 aa17.76■□□□□ 0.43
SSRP1-204ENST00000529002 LIX1LQ8IVB5 337 aa17.76■□□□□ 0.43
SSRP1-204ENST00000529002 CLYBLQ8N0X4 340 aa17.76■□□□□ 0.43
SSRP1-204ENST00000529002 LGI4Q8N135 537 aa17.76■□□□□ 0.43
SSRP1-204ENST00000529002 PLPP5Q8NEB5 264 aa17.76■□□□□ 0.43
SSRP1-204ENST00000529002 OR5M9Q8NGP3 310 aa17.76■□□□□ 0.43
SSRP1-204ENST00000529002 OR5M3Q8NGP4 307 aa17.76■□□□□ 0.43
SSRP1-204ENST00000529002 OR10Q1Q8NGQ4 319 aa17.76■□□□□ 0.43
SSRP1-204ENST00000529002 ZNF480Q8WV37 535 aa17.76■□□□□ 0.43
SSRP1-204ENST00000529002 TMEM125Q96AQ2 219 aa17.76■□□□□ 0.43
SSRP1-204ENST00000529002 CLEC4MQ9H2X3 399 aaPredicted RBP17.76■□□□□ 0.43
SSRP1-204ENST00000529002 TRIM45Q9H8W5 580 aaPredicted RBP17.76■□□□□ 0.43
SSRP1-204ENST00000529002 ETNK1Q9HBU6 452 aa17.76■□□□□ 0.43
SSRP1-204ENST00000529002 CHRAC1Q9NRG0 131 aa17.76■□□□□ 0.43
SSRP1-204ENST00000529002 PNPLA3Q9NST1 481 aa17.76■□□□□ 0.43
SSRP1-204ENST00000529002 SYCE3A1L190 88 aa17.75■□□□□ 0.43
SSRP1-204ENST00000529002 E7ENX8 843 aa17.75■□□□□ 0.43
SSRP1-204ENST00000529002 NPIPA2E9PIF3 369 aa17.75■□□□□ 0.43
SSRP1-204ENST00000529002 NPIPA3F8WFD2 350 aa17.75■□□□□ 0.43
SSRP1-204ENST00000529002 GOLGA6L19H0YKK7 550 aa17.75■□□□□ 0.43
SSRP1-204ENST00000529002 KPNA5O15131 536 aa17.75■□□□□ 0.43
SSRP1-204ENST00000529002 SLC16A5O15375 505 aa17.75■□□□□ 0.43
SSRP1-204ENST00000529002 NDUFS3O75489 264 aa17.75■□□□□ 0.43
SSRP1-204ENST00000529002 TJP3O95049 919 aa17.75■□□□□ 0.43
SSRP1-204ENST00000529002 B3GALT4O96024 378 aa17.75■□□□□ 0.43
SSRP1-204ENST00000529002 RPS3P23396 243 aaKnown RBP eCLIP17.75■□□□□ 0.431e-6■■■□□ 17.1
SSRP1-204ENST00000529002 TTPAP49638 278 aa17.75■□□□□ 0.43
SSRP1-204ENST00000529002 HLCSP50747 726 aa17.75■□□□□ 0.43
SSRP1-204ENST00000529002 DGKQP52824 942 aa17.75■□□□□ 0.43
SSRP1-204ENST00000529002 CRADDP78560 199 aa17.75■□□□□ 0.43
SSRP1-204ENST00000529002 TAP2Q03519 686 aa17.75■□□□□ 0.43
SSRP1-204ENST00000529002 KLHL38Q2WGJ6 581 aa17.75■□□□□ 0.43
SSRP1-204ENST00000529002 AARS2Q5JTZ9 985 aaKnown RBP17.75■□□□□ 0.43
SSRP1-204ENST00000529002 TMEM214Q6NUQ4 689 aaKnown RBP17.75■□□□□ 0.43
SSRP1-204ENST00000529002 TAOK1Q7L7X3 1001 aa17.75■□□□□ 0.43
SSRP1-204ENST00000529002 MDGA2Q7Z553 956 aa17.75■□□□□ 0.43
SSRP1-204ENST00000529002 PRIMA1Q86XR5 153 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms